[Molvis-list] exporting _good_ h-bonds (was: export Chime h-bonds)

Kevin Karplus karplus at soe.ucsc.edu
Tue Jan 3 12:04:10 EST 2006

Rasmol routinely displays i..i+2 "Hbonds" in beta strands that are
clearly bogus.  These bogus Hbonds are not reported by DSSP.  The
Kabsch and Sander formulation includes some geometric considerations
that rasmol seems to have simplified away to its detriment.

Kevin Karplus 	karplus at soe.ucsc.edu	http://www.soe.ucsc.edu/~karplus
Professor of Biomolecular Engineering, University of California, Santa Cruz
Undergraduate and Graduate Director, Bioinformatics
(Senior member, IEEE)	(Board of Directors, ISCB)
life member (LAB, Adventure Cycling, American Youth Hostels)
Effective Cycling Instructor #218-ck (lapsed)
Affiliations for identification only.

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