[Molvis-list] help: SS-bond in Rasmol-2.7.3
Nanjiang Shu
nanjiang.shu at gmail.com
Tue Mar 14 05:36:07 EST 2006
Hello,
I have a question about the ssbond function in Rasmol.
For protein with PDB code "1AOL", when typing SS-bond, it shows there
are 6
SS bridges, and the distance between bonded sulfur atoms is around 2 Å.
However, both PDB file and DSSP file do not indicate there are any
SS-bonds
for that protein. What scheme does Rasmol use to determine whether
there is
an SS-bond or not? Something other than DSSP and PDB file?
Thanks very much.
Yours sincerely,
Nanjiang S
------------------------------
Nanjiang Shu, PhD
Structural Chemistry
Stockholm University
Sweden
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