[Molvis-list] rasmol load xyz

Keith McLaughlin kmclaugh at physics.cas.usf.edu
Fri Oct 24 19:40:33 EDT 2008


I compiled it from source. I can post the output if it might be helpful.

On Fri, Oct 24, 2008 at 5:28 PM, Herbert J. Bernstein <
yaya at bernstein-plus-sons.com> wrote:

> Did you get the binary from an RPM or did you build it from source?
> It sounds like a bad compilation. -- HJB
>
> =====================================================
>  Herbert J. Bernstein, Professor of Computer Science
>   Dowling College, Kramer Science Center, KSC 121
>        Idle Hour Blvd, Oakdale, NY, 11769
>
>                 +1-631-244-3035
>                 yaya at dowling.edu
> =====================================================
>
> On Mon, 20 Oct 2008, Keith McLaughlin wrote:
>
>  I tested it on another box and it seems to work. The problem is with
>> rasmol
>> 2.7.4.2 on fedora core 4.
>>
>> On Sat, Oct 18, 2008 at 3:59 PM, Herbert J. Bernstein <
>> yaya at bernstein-plus-sons.com> wrote:
>>
>>  Could you be more specific about which binary of what rasmol
>>> version you tried on what system with what xyz file?  I just
>>> tried it on a mac with rasmol 2.7.4.2 under X11 and it worked
>>> both ways for 1crn.xyz.
>>>
>>> -- Herbert
>>>
>>> =====================================================
>>>  Herbert J. Bernstein, Professor of Computer Science
>>>  Dowling College, Kramer Science Center, KSC 121
>>>       Idle Hour Blvd, Oakdale, NY, 11769
>>>
>>>                +1-631-244-3035
>>>                yaya at dowling.edu
>>> =====================================================
>>>
>>>
>>> On Fri, 17 Oct 2008, Keith McLaughlin wrote:
>>>
>>>  Hi all,
>>>
>>>>
>>>> Perhaps this has already been pointed out, I wasn't able to find any
>>>> mention
>>>> in the archives. Using the command "load xyz somefile.xyz" does not
>>>> work.
>>>> It
>>>> gives a "Molecule database not loaded!" error. If I use the command line
>>>> ./rasmol -xyz somefile.xyz, however, it loads fine.
>>>>
>>>> --
>>>> Keith McLaughlin
>>>> University of South Florida
>>>> Department of Physics
>>>> 4202 E. Fowler Ave
>>>> Tampa, FL 33620
>>>> _______________________________________________
>>>> Molvis-list mailing list
>>>> Molvis-list at bioinformatics.org
>>>> http://www.bioinformatics.org/mailman/listinfo/molvis-list
>>>>
>>>>
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>>>
>>
>>
>> --
>> Keith McLaughlin
>> University of South Florida
>> Department of Physics
>> 4202 E. Fowler Ave
>> Tampa, FL 33620
>> _______________________________________________
>> Molvis-list mailing list
>> Molvis-list at bioinformatics.org
>> http://www.bioinformatics.org/mailman/listinfo/molvis-list
>>
>>
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-- 
Keith McLaughlin
University of South Florida
Department of Physics
4202 E. Fowler Ave
Tampa, FL 33620


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