Hello,<br>
<br>
I am currently using your openmms package for my master program on the
linux. But unfortunately I am currently getting an error when I try to
load the mmcif data to the database , by running the pdbase shell
script located in ../OpenMMS-1.5.1_Std/openmms/run/unix. The error that
I get is as follow:<br>
<br>
Exception in thread "main" java.lang.ClassNotFoundException:
org.omg.CORBA.ORB not found in
gnu.gcj.runtime.SystemClassLoader{urls=[file:./,file:/tmp/mohaddez/OpenMMS-1.5.1_Std/OpenMMS-1.5.1_Std/openmms/classes/,file:/u/mohaddez/HE/workspace/mysql-connector-java-3.1.8-bin.jar],
parent=gnu.gcj.runtime.ExtensionClassLoader{urls=[], parent=null}}<br>
at java.net.URLClassLoader.findClass(java.lang.String) (/usr/lib64/libgcj.so.6.0.0)<br>
at java.lang.ClassLoader.loadClass(java.lang.String, boolean) (/usr/lib64/libgcj.so.6.0.0)<br>
at java.lang.ClassLoader.loadClass(java.lang.String) (/usr/lib64/libgcj.so.6.0.0)<br>
at org.rcsb.openmms.apps.rdb.PDBase.execute(java.lang.String[]) (Unknown Source)<br>
at org.rcsb.openmms.apps.rdb.PDBase.main(java.lang.String[]) (Unknown Source)<br>
at .main (/usr/lib64/libgij.so.6.0.0)<br>
at .__libc_start_main (/lib64/libc-<a href="http://2.3.6.so">2.3.6.so</a>)<br>
<br>
I have changed the _vars.sh file with my own local variables and made
sure JAVA_BIN_DIR and and other variables point to the right directory
on my computer.<br>
I have also looked inside the classes folder but I didn't find an org.omg.Corba folder.<br>
<br>
Can you please help me with this.<br>
<br>
Your help is greatly appreciated.<br>
<br>
Best regards,<br>
<br>
Zia<br>
<br>