Basic Information
Gene ID 100991773
Gene Name LMX1A
Full Name PREDICTED: LIM homeobox transcription factor 1-alpha isoform 1 [Panpaniscus].
Organism Pan paniscus [9597]

Cross Reference
UniProt NULL UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
REFSEQ
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
XP_003824628 Gene3D G3DSA:1.10.10.60 IPR009057 180 247 2.60e-23 Homeodomain-like
XP_003824628 Gene3D G3DSA:2.10.110.10 IPR001781 32 97 7.80e-16 Zinc finger, LIM-type
XP_003824628 Gene3D G3DSA:2.10.110.10 IPR001781 98 150 4.40e-15 Zinc finger, LIM-type
XP_003824628 Pfam PF00046 IPR001356 196 252 1.50e-17 Homeobox domain
XP_003824628 Pfam PF00412 IPR001781 35 90 1.40e-14 Zinc finger, LIM-type
XP_003824628 Pfam PF00412 IPR001781 94 151 1.30e-15 Zinc finger, LIM-type
XP_003824628 ProSitePatterns PS00027 IPR017970 228 251 - Homeobox, conserved site
XP_003824628 ProSitePatterns PS00478 IPR001781 35 69 - Zinc finger, LIM-type
XP_003824628 ProSitePatterns PS00478 IPR001781 94 129 - Zinc finger, LIM-type
XP_003824628 ProSiteProfiles PS50023 IPR001781 33 92 0.00e-00 Zinc finger, LIM-type
XP_003824628 ProSiteProfiles PS50023 IPR001781 93 154 0.00e-00 Zinc finger, LIM-type
XP_003824628 ProSiteProfiles PS50071 IPR001356 193 253 0.00e-00 Homeobox domain
XP_003824628 SMART SM00132 IPR001781 34 85 1.40e-17 Zinc finger, LIM-type
XP_003824628 SMART SM00132 IPR001781 93 147 1.30e-19 Zinc finger, LIM-type
XP_003824628 SMART SM00389 IPR001356 195 257 1.00e-23 Homeobox domain
XP_003824628 SUPERFAMILY SSF46689 IPR009057 187 253 0.00e-00 Homeodomain-like

Pfam Annotation
Protein Pfam ID E.value Name Description
XP_003824628 PF00412 1.2e-30 LIM LIM domain
XP_003824628 PF00046 6.8e-18 Homeobox Homeobox domain
XP_003824628 PF05920 0.00011 Homeobox_KN Homeobox KN domain

Gene Ontology Annotation
Protein Entry Name Space Description
XP_003824628 GO:0006351 biological_process transcription, DNA-templated
XP_003824628 GO:0006355 biological_process regulation of transcription, DNA-templated
XP_003824628 GO:0007275 biological_process multicellular organismal development
XP_003824628 GO:0005634 cellular_component nucleus
XP_003824628 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
XP_003824628 GO:0008270 molecular_function zinc ion binding
XP_003824628 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
9986 Oryctolagus cuniculus 100338248 7029 Acyrthosiphon pisum 100166469
9483 Callithrix jacchus 100387212 9646 Ailuropoda melanoleuca 100475199
9785 Loxodonta africana 100658788 10141 Cavia porcellus 100726831
10029 Cricetulus griseus 100760113 9555 Papio anubis 101014470
39432 Saimiri boliviensis 101039698 9685 Felis catus 101081519
10090 Mus musculus 110648 7227 Drosophila melanogaster 39406
9615 Canis familiaris 609061 9544 Macaca mulatta 694542
28377 Anolis carolinensis ENSACAG00000004557 9358 Choloepus hoffmanni ENSCHOG00000013620
51511 Ciona savignyi ENSCSAVG00000000947 9361 Dasypus novemcinctus ENSDNOG00000012261
10020 Dipodomys ordii ENSDORG00000014036 9371 Echinops telfairi ENSETEG00000005532
7897 Latimeria chalumnae ENSLACG00000014991 9103 Meleagris gallopavo ENSMGAG00000003603
30608 Microcebus murinus ENSMICG00000009958 59463 Myotis lucifugus ENSMLUG00000010463
13616 Monodelphis domestica ENSMODG00000001270 61853 Nomascus leucogenys ENSNLEG00000014674
9258 Ornithorhynchus anatinus ENSOANG00000022733 30611 Otolemur garnettii ENSOGAG00000011315
9978 Ochotona princeps ENSOPRG00000014466 9305 Sarcophilus harrisii ENSSHAG00000014535
9823 Sus scrofa ENSSSCG00000006329 43179 Ictidomys tridecemlineatus ENSSTOG00000005189
37347 Tupaia belangeri ENSTBEG00000014918 59729 Taeniopygia guttata ENSTGUG00000017316
99883 Tetraodon nigroviridis ENSTNIG00000018553 9478 Tarsius syrichta ENSTSYG00000012930
9739 Tursiops truncatus ENSTTRG00000003649 30538 Vicugna pacos ENSVPAG00000004576
8364 Xenopus tropicalis ENSXETG00000013183 8083 Xiphophorus maculatus ENSXMAG00000013334
9595 Gorilla gorilla 101151857 9669 Mustela putorius furo 101693093
9598 Pan troglodytes 747979 13735 Pelodiscus sinensis ENSPSIG00000005639