Basic Information | |||
Gene ID | 100995089 | ||
Gene Name | HMGB3 | ||
Full Name | PREDICTED: high mobility group protein B3 [Pan paniscus]. | ||
Organism | Pan paniscus [9597] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_003805186 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 111 | 185 | 9.10e-30 | High mobility group box domain |
XP_003805186 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 28 | 98 | 1.50e-27 | High mobility group box domain |
XP_003805186 | Pfam | PF00505 | IPR009071 | 113 | 181 | 1.90e-27 | High mobility group box domain |
XP_003805186 | Pfam | PF09011 | IPR009071 | 26 | 98 | 5.70e-30 | High mobility group box domain |
XP_003805186 | ProSitePatterns | PS00353 | IPR017967 | 61 | 72 | - | HMG box A DNA-binding domain, conserved site |
XP_003805186 | ProSiteProfiles | PS50118 | IPR009071 | 113 | 181 | 0.00e-00 | High mobility group box domain |
XP_003805186 | ProSiteProfiles | PS50118 | IPR009071 | 29 | 99 | 0.00e-00 | High mobility group box domain |
XP_003805186 | SMART | SM00398 | IPR009071 | 112 | 182 | 2.80e-34 | High mobility group box domain |
XP_003805186 | SMART | SM00398 | IPR009071 | 28 | 100 | 8.80e-28 | High mobility group box domain |
XP_003805186 | SUPERFAMILY | SSF47095 | IPR009071 | 101 | 182 | 0.00e-00 | High mobility group box domain |
XP_003805186 | SUPERFAMILY | SSF47095 | IPR009071 | 23 | 99 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_003805186 | PF09011 | 0 | HMG_box_2 | HMG-box domain |
XP_003805186 | PF00505 | 8.39378e-43 | HMG_box | HMG (high mobility group) box |
XP_003805186 | PF14887 | 1.5e-06 | HMG_box_5 | HMG (high mobility group) box 5 |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_003805186 | GO:0005634 | cellular_component | nucleus |
XP_003805186 | GO:0005694 | cellular_component | chromosome |
XP_003805186 | GO:0003677 | molecular_function | DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9823 | Sus scrofa | 100517745 | 10029 | Cricetulus griseus | 100772377 |
9555 | Papio anubis | 101019418 | 39432 | Saimiri boliviensis | 101032929 |
9595 | Gorilla gorilla | 101129467 | 9669 | Mustela putorius furo | 101694047 |
43179 | Ictidomys tridecemlineatus | 101966850 | 7897 | Latimeria chalumnae | 102353521 |
59463 | Myotis lucifugus | 102434276 | 10090 | Mus musculus | 15354 |
9606 | Homo sapiens | 3149 | 8364 | Xenopus tropicalis | 448228 |
9615 | Canis familiaris | 481073 | 7955 | Danio rerio | 561025 |
9544 | Macaca mulatta | 703598 | 28377 | Anolis carolinensis | ENSACAG00000013274 |
9483 | Callithrix jacchus | ENSCJAG00000033322 | 10141 | Cavia porcellus | ENSCPOG00000000601 |
10020 | Dipodomys ordii | ENSDORG00000010826 | 9796 | Equus caballus | ENSECAG00000020596 |
9371 | Echinops telfairi | ENSETEG00000015689 | 9685 | Felis catus | ENSFCAG00000024624 |
9031 | Gallus gallus | ENSGALG00000009071 | 30608 | Microcebus murinus | ENSMICG00000015668 |
13616 | Monodelphis domestica | ENSMODG00000005735 | 61853 | Nomascus leucogenys | ENSNLEG00000018249 |
30611 | Otolemur garnettii | ENSOGAG00000001773 | 9813 | Procavia capensis | ENSPCAG00000001945 |
13735 | Pelodiscus sinensis | ENSPSIG00000015958 | 9598 | Pan troglodytes | ENSPTRG00000022371 |
132908 | Pteropus vampyrus | ENSPVAG00000000219 | 9478 | Tarsius syrichta | ENSTSYG00000014321 |
9739 | Tursiops truncatus | ENSTTRG00000000205 | 10116 | Rattus norvegicus | 305373 |
9913 | Bos taurus | ENSBTAG00000031711 | 9358 | Choloepus hoffmanni | ENSCHOG00000005005 |
9986 | Oryctolagus cuniculus | ENSOCUG00000005986 | 37347 | Tupaia belangeri | ENSTBEG00000003068 |
30538 | Vicugna pacos | ENSVPAG00000000096 |
Paralogs | |||
100982031 | 100984774 | 100969665 | 100971286 |
100980430 | 100981686 | 100985531 |