Basic Information | |||
Gene ID | 102353566 | ||
Gene Name | NULL | ||
Full Name | Uncharacterized protein | ||
Organism | Latimeria chalumnae [7897] |
Cross Reference | |||
UniProt | H3A8N4 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSLACP00000006005 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 36 | 115 | 2.70e-40 | High mobility group box domain |
ENSLACP00000006005 | Pfam | PF00505 | IPR009071 | 37 | 105 | 2.30e-26 | High mobility group box domain |
ENSLACP00000006005 | Pfam | PF12336 | IPR022097 | 106 | 143 | 1.40e-12 | Transcription factor SOX |
ENSLACP00000006005 | ProSiteProfiles | PS50118 | IPR009071 | 37 | 105 | 0.00e-00 | High mobility group box domain |
ENSLACP00000006005 | SMART | SM00398 | IPR009071 | 36 | 106 | 5.00e-30 | High mobility group box domain |
ENSLACP00000006005 | SUPERFAMILY | SSF47095 | IPR009071 | 29 | 109 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSLACP00000006005 | PF00505 | 1.4e-26 | HMG_box | HMG (high mobility group) box |
ENSLACP00000006005 | PF12336 | 1.9e-13 | SOXp | SOX transcription factor |
ENSLACP00000006005 | PF09011 | 4.6e-11 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSLACP00000006005 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSLACP00000006005 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSLACP00000006005 | GO:0005634 | cellular_component | nucleus |
ENSLACP00000006005 | GO:0003677 | molecular_function | DNA binding |
ENSLACP00000006005 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9986 | Oryctolagus cuniculus | 100349813 | 8083 | Xiphophorus maculatus | 102225865 |
8128 | Oreochromis niloticus | 100691128 | 7955 | Danio rerio | 436756 |
9913 | Bos taurus | 618135 | 9606 | Homo sapiens | 6656 |
69293 | Gasterosteus aculeatus | ENSGACG00000002889 | 8049 | Gadus morhua | ENSGMOG00000020606 |
9315 | Macropus eugenii | ENSMEUG00000016617 | 30611 | Otolemur garnettii | ENSOGAG00000034416 |
9601 | Pongo abelii | ENSPPYG00000005512 | 8364 | Xenopus tropicalis | ENSXETG00000001902 |
28377 | Anolis carolinensis | ENSACAG00000006346 | 9615 | Canis familiaris | ENSCAFG00000006137 |
9361 | Dasypus novemcinctus | ENSDNOG00000023758 | 8090 | Oryzias latipes | ENSORLG00000012110 |
99883 | Tetraodon nigroviridis | ENSTNIG00000013867 |
Paralogs | |||
102359787 |