Basic Information
Gene ID 20679 ; Check Expression Profles ; Check TFs & Targets Binding
Gene Name Sox6; Sox-6
Full Name Transcription factor SOX-6
Organism Mus musculus [10090]

Cross Reference
UniProt P40645 UniGene Mm.487065
PDB NULL OMIM NULL
KEGG mmu:20679 UCSC uc009jip.1

Protein Interactions
DIP NULL
IntAct P40645
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
ENSEMBL
ENSEMBL
ENSEMBL
ENSEMBL
REFSEQ
REFSEQ
REFSEQ
REFSEQ
REFSEQ
REFSEQ
REFSEQ
REFSEQ
REFSEQ
REFSEQ
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSMUSP00000129027 Gene3D G3DSA:1.10.30.10 IPR009071 618 699 2.70e-33 High mobility group box domain
ENSMUSP00000129027 Pfam PF00505 IPR009071 620 688 7.30e-22 High mobility group box domain
ENSMUSP00000129027 ProSiteProfiles PS50118 IPR009071 620 688 0.00e-00 High mobility group box domain
ENSMUSP00000129027 SMART SM00398 IPR009071 619 689 4.90e-28 High mobility group box domain
ENSMUSP00000129027 SUPERFAMILY SSF47095 IPR009071 619 697 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSMUSP00000129027 PF00505 2.6e-22 HMG_box HMG (high mobility group) box
ENSMUSP00000129027 PF09011 7.2e-09 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSMUSP00000129027 GO:0006351 biological_process transcription, DNA-templated
ENSMUSP00000129027 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSMUSP00000129027 GO:0005634 cellular_component nucleus
ENSMUSP00000129027 GO:0003677 molecular_function DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7425 Nasonia vitripennis 100119354 7029 Acyrthosiphon pisum 100168120
8090 Oryzias latipes 100304449 30195 Bombus terrestris 100650599
8128 Oreochromis niloticus 100694759 10141 Cavia porcellus 100715958
132113 Bombus impatiens 100741472 10029 Cricetulus griseus 100755098
7463 Apis florea 100863610 143995 Megachile rotundata 100882181
34638 Metaseiulus occidentalis 100904962 9597 Pan paniscus 100975998
9555 Papio anubis 101016620 39432 Saimiri boliviensis 101039628
7897 Latimeria chalumnae 102347503 9305 Sarcophilus harrisii ENSSHAG00000006502
7668 Strongylocentrotus purpuratus 373200 7460 Apis mellifera 408884
7227 Drosophila melanogaster 43844 9913 Bos taurus 534321
7955 Danio rerio 567154 7070 Tribolium castaneum 663268
9544 Macaca mulatta 697831 28377 Anolis carolinensis ENSACAG00000012782
9646 Ailuropoda melanoleuca ENSAMEG00000007732 9615 Canis familiaris ENSCAFG00000008607
9358 Choloepus hoffmanni ENSCHOG00000005751 7719 Ciona intestinalis ENSCING00000015003
9361 Dasypus novemcinctus ENSDNOG00000004344 10020 Dipodomys ordii ENSDORG00000003684
9796 Equus caballus ENSECAG00000010880 9365 Erinaceus europaeus ENSEEUG00000006749
9371 Echinops telfairi ENSETEG00000001898 9685 Felis catus ENSFCAG00000002214
69293 Gasterosteus aculeatus ENSGACG00000015635 9031 Gallus gallus ENSGALG00000013204
9595 Gorilla gorilla ENSGGOG00000010884 8049 Gadus morhua ENSGMOG00000009040
9785 Loxodonta africana ENSLAFG00000002917 9315 Macropus eugenii ENSMEUG00000010268
9103 Meleagris gallopavo ENSMGAG00000006785 30608 Microcebus murinus ENSMICG00000008914
59463 Myotis lucifugus ENSMLUG00000007911 13616 Monodelphis domestica ENSMODG00000007224
9669 Mustela putorius furo ENSMPUG00000013283 61853 Nomascus leucogenys ENSNLEG00000005036
9258 Ornithorhynchus anatinus ENSOANG00000022345 9986 Oryctolagus cuniculus ENSOCUG00000012557
30611 Otolemur garnettii ENSOGAG00000005358 9978 Ochotona princeps ENSOPRG00000003350
9813 Procavia capensis ENSPCAG00000001398 7757 Petromyzon marinus ENSPMAG00000006026
9601 Pongo abelii ENSPPYG00000003459 13735 Pelodiscus sinensis ENSPSIG00000009027
9598 Pan troglodytes ENSPTRG00000003393 132908 Pteropus vampyrus ENSPVAG00000011735
10116 Rattus norvegicus ENSRNOG00000027869 42254 Sorex araneus ENSSARG00000011926
9823 Sus scrofa ENSSSCG00000030418 43179 Ictidomys tridecemlineatus ENSSTOG00000013609
37347 Tupaia belangeri ENSTBEG00000002476 59729 Taeniopygia guttata ENSTGUG00000008522
99883 Tetraodon nigroviridis ENSTNIG00000009384 31033 Takifugu rubripes ENSTRUG00000017299
9478 Tarsius syrichta ENSTSYG00000007395 9739 Tursiops truncatus ENSTTRG00000003214
30538 Vicugna pacos ENSVPAG00000003132 8364 Xenopus tropicalis ENSXETG00000016058
8083 Xiphophorus maculatus ENSXMAG00000007070