Basic Information | |||
Gene ID | 361746 ; Check Expression Profles ; Check TFs & Targets Binding | ||
Gene Name | Rfx3 | ||
Full Name | Protein Rfx3 | ||
Organism | Rattus norvegicus [10116] |
Cross Reference | |||
UniProt | Q5U2M9 | UniGene | Rn.23347 |
PDB | NULL | OMIM | NULL |
KEGG | rno:361746 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | 10116.ENSRNOP00000019515 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSRNOP00000023762 | Gene3D | G3DSA:1.10.10.10 | IPR011991 | 183 | 244 | 5.70e-25 | Winged helix-turn-helix DNA-binding domain |
ENSRNOP00000023762 | Pfam | PF02257 | IPR003150 | 176 | 245 | 1.60e-21 | DNA-binding RFX-type winged-helix domain |
ENSRNOP00000023762 | Pfam | PF04589 | IPR007668 | 1 | 139 | 3.50e-55 | RFX1 transcription activation region |
ENSRNOP00000023762 | ProSiteProfiles | PS51526 | IPR003150 | 183 | 244 | 0.00e-00 | DNA-binding RFX-type winged-helix domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSRNOP00000023762 | PF04589 | 0 | RFX1_trans_act | RFX1 transcription activation region |
ENSRNOP00000023762 | PF02257 | 6.7e-24 | RFX_DNA_binding | RFX DNA-binding domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSRNOP00000023762 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSRNOP00000023762 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSRNOP00000023762 | GO:0005634 | cellular_component | nucleus |
ENSRNOP00000023762 | GO:0003677 | molecular_function | DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9555 | Papio anubis | 101014246 | 9361 | Dasypus novemcinctus | ENSDNOG00000018668 |
10020 | Dipodomys ordii | ENSDORG00000013906 | 9371 | Echinops telfairi | ENSETEG00000002475 |
37347 | Tupaia belangeri | ENSTBEG00000016009 | 9739 | Tursiops truncatus | ENSTTRG00000003709 |