Basic Information
Gene ID 373522
Gene Name NULL
Full Name Lim homeodomain transcription factor 1
Organism Strongylocentrotus purpuratus [7668]

Cross Reference
UniProt Q7YT18 UniGene Spu.22
PDB NULL OMIM NULL
KEGG spu:373522 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
NP_999810 Gene3D G3DSA:1.10.10.60 IPR009057 235 292 1.90e-23 Homeodomain-like
NP_999810 Gene3D G3DSA:2.10.110.10 IPR001781 2 66 1.70e-16 Zinc finger, LIM-type
NP_999810 Gene3D G3DSA:2.10.110.10 IPR001781 67 121 8.10e-14 Zinc finger, LIM-type
NP_999810 Pfam PF00046 IPR001356 233 289 1.40e-19 Homeobox domain
NP_999810 Pfam PF00412 IPR001781 5 59 1.10e-14 Zinc finger, LIM-type
NP_999810 Pfam PF00412 IPR001781 64 121 1.60e-15 Zinc finger, LIM-type
NP_999810 ProSitePatterns PS00027 IPR017970 265 288 - Homeobox, conserved site
NP_999810 ProSitePatterns PS00478 IPR001781 5 39 - Zinc finger, LIM-type
NP_999810 ProSitePatterns PS00478 IPR001781 64 99 - Zinc finger, LIM-type
NP_999810 ProSiteProfiles PS50023 IPR001781 3 62 0.00e-00 Zinc finger, LIM-type
NP_999810 ProSiteProfiles PS50023 IPR001781 63 125 0.00e-00 Zinc finger, LIM-type
NP_999810 ProSiteProfiles PS50071 IPR001356 230 290 0.00e-00 Homeobox domain
NP_999810 SMART SM00132 IPR001781 4 55 7.40e-19 Zinc finger, LIM-type
NP_999810 SMART SM00132 IPR001781 63 118 3.90e-19 Zinc finger, LIM-type
NP_999810 SMART SM00389 IPR001356 232 294 5.40e-25 Homeobox domain
NP_999810 SUPERFAMILY SSF46689 IPR009057 224 291 0.00e-00 Homeodomain-like

Pfam Annotation
Protein Pfam ID E.value Name Description
NP_999810 PF00412 1.2e-30 LIM LIM domain
NP_999810 PF00046 6.8e-20 Homeobox Homeobox domain
NP_999810 PF05920 5.3e-05 Homeobox_KN Homeobox KN domain

Gene Ontology Annotation
Protein Entry Name Space Description
NP_999810 GO:0007399 biological_process nervous system development
NP_999810 GO:0009952 biological_process anterior/posterior pattern specification
NP_999810 GO:0045893 biological_process positive regulation of transcription, DNA-templated
NP_999810 GO:0005634 cellular_component nucleus
NP_999810 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
NP_999810 GO:0008270 molecular_function zinc ion binding
NP_999810 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
13616 Monodelphis domestica 100028420 7425 Nasonia vitripennis 100116733
7029 Acyrthosiphon pisum 100158984 10224 Saccoglossus kowalevskii 100366515
9483 Callithrix jacchus 100392549 9601 Pongo abelii 100451412
400682 Amphimedon queenslandica 100633432 30195 Bombus terrestris 100644955
9785 Loxodonta africana 100675956 132113 Bombus impatiens 100741244
10029 Cricetulus griseus 100768655 143995 Megachile rotundata 100882468
34638 Metaseiulus occidentalis 100904816 9305 Sarcophilus harrisii 100931234
30611 Otolemur garnettii 100951554 9597 Pan paniscus 100988029
9555 Papio anubis 101008593 39432 Saimiri boliviensis 101033157
31033 Takifugu rubripes 101061689 9685 Felis catus 101083467
8090 Oryzias latipes 101166400 9669 Mustela putorius furo 101687390
43179 Ictidomys tridecemlineatus 101973608 8083 Xiphophorus maculatus 102218401
7897 Latimeria chalumnae 102362985 59463 Myotis lucifugus 102440821
13735 Pelodiscus sinensis 102453882 6239 Caenorhabditis elegans 172893
10116 Rattus norvegicus 257634 7955 Danio rerio 30465
7227 Drosophila melanogaster 31813 9823 Sus scrofa 100513681
9615 Canis familiaris 100856649 9595 Gorilla gorilla 101135759
9371 Echinops telfairi ENSETEG00000003513 61853 Nomascus leucogenys ENSNLEG00000002343
8364 Xenopus tropicalis 548836 9606 Homo sapiens 64211
9913 Bos taurus 786041 28377 Anolis carolinensis ENSACAG00000005037
9646 Ailuropoda melanoleuca ENSAMEG00000008305 9358 Choloepus hoffmanni ENSCHOG00000007567
7719 Ciona intestinalis ENSCING00000019733 10141 Cavia porcellus ENSCPOG00000023977
51511 Ciona savignyi ENSCSAVG00000004922 9361 Dasypus novemcinctus ENSDNOG00000010448
10020 Dipodomys ordii ENSDORG00000006956 9796 Equus caballus ENSECAG00000016915
9365 Erinaceus europaeus ENSEEUG00000002834 69293 Gasterosteus aculeatus ENSGACG00000013605
9031 Gallus gallus ENSGALG00000005409 8049 Gadus morhua ENSGMOG00000002984
9315 Macropus eugenii ENSMEUG00000006658 9103 Meleagris gallopavo ENSMGAG00000007924
9544 Macaca mulatta ENSMMUG00000021668 9258 Ornithorhynchus anatinus ENSOANG00000014248
9986 Oryctolagus cuniculus ENSOCUG00000024664 9978 Ochotona princeps ENSOPRG00000009362
9813 Procavia capensis ENSPCAG00000010694 7757 Petromyzon marinus ENSPMAG00000008904
9598 Pan troglodytes ENSPTRG00000009050 132908 Pteropus vampyrus ENSPVAG00000015637
42254 Sorex araneus ENSSARG00000010593 37347 Tupaia belangeri ENSTBEG00000007734
59729 Taeniopygia guttata ENSTGUG00000008052 99883 Tetraodon nigroviridis ENSTNIG00000014399
9739 Tursiops truncatus ENSTTRG00000008900