Basic Information
Gene ID 396105
Gene Name SOX2
Full Name Transcription factor SOX-2
Organism Gallus gallus [9031]

Cross Reference
UniProt P48430 UniGene Gga.601
PDB NULL OMIM NULL
KEGG gga:396105 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSGALP00000014363 Gene3D G3DSA:1.10.30.10 IPR009071 38 117 9.80e-41 High mobility group box domain
ENSGALP00000014363 Pfam PF00505 IPR009071 39 107 5.10e-27 High mobility group box domain
ENSGALP00000014363 Pfam PF12336 IPR022097 108 198 2.00e-29 Transcription factor SOX
ENSGALP00000014363 ProSiteProfiles PS50118 IPR009071 39 107 0.00e-00 High mobility group box domain
ENSGALP00000014363 SMART SM00398 IPR009071 38 108 5.90e-31 High mobility group box domain
ENSGALP00000014363 SUPERFAMILY SSF47095 IPR009071 29 111 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSGALP00000014363 PF12336 2e-29 SOXp SOX transcription factor
ENSGALP00000014363 PF00505 3.1e-27 HMG_box HMG (high mobility group) box
ENSGALP00000014363 PF09011 1e-11 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSGALP00000014363 GO:0006351 biological_process transcription, DNA-templated
ENSGALP00000014363 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSGALP00000014363 GO:0007275 biological_process multicellular organismal development
ENSGALP00000014363 GO:0005634 cellular_component nucleus
ENSGALP00000014363 GO:0003677 molecular_function DNA binding
ENSGALP00000014363 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
9601 Pongo abelii 100460719 400682 Amphimedon queenslandica 100632156
30195 Bombus terrestris 100643013 10029 Cricetulus griseus 100759815
34638 Metaseiulus occidentalis 100898556 9555 Papio anubis 101022620
13735 Pelodiscus sinensis 102443720 7668 Strongylocentrotus purpuratus 373202
7029 Acyrthosiphon pisum 100164548 6087 Hydra magnipapillata 100205840
10224 Saccoglossus kowalevskii 100303496 7425 Nasonia vitripennis 100678051
8128 Oreochromis niloticus 100695175 132113 Bombus impatiens 100742000
7463 Apis florea 100866912 143995 Megachile rotundata 100878525
30611 Otolemur garnettii 100963354 39432 Saimiri boliviensis 101037370
31033 Takifugu rubripes 101073272 8090 Oryzias latipes 101162114
8083 Xiphophorus maculatus 102226408 7897 Latimeria chalumnae 102366157
6239 Caenorhabditis elegans 185534 7227 Drosophila melanogaster 39567
8364 Xenopus tropicalis 407873 7955 Danio rerio 436756
9598 Pan troglodytes 460869 10116 Rattus norvegicus 499593
9913 Bos taurus 618135 7719 Ciona intestinalis ENSCING00000006005
10141 Cavia porcellus ENSCPOG00000008309 9361 Dasypus novemcinctus ENSDNOG00000019903
9371 Echinops telfairi ENSETEG00000006366 9595 Gorilla gorilla ENSGGOG00000027572
59463 Myotis lucifugus ENSMLUG00000013015 9258 Ornithorhynchus anatinus ENSOANG00000004458
9986 Oryctolagus cuniculus ENSOCUG00000011135 9978 Ochotona princeps ENSOPRG00000017106
9813 Procavia capensis ENSPCAG00000003690 42254 Sorex araneus ENSSARG00000006102
9823 Sus scrofa ENSSSCG00000011771 43179 Ictidomys tridecemlineatus ENSSTOG00000011011
99883 Tetraodon nigroviridis ENSTNIG00000003970 9478 Tarsius syrichta ENSTSYG00000001164
9739 Tursiops truncatus ENSTTRG00000004853 9615 Canis familiaris 488092
7070 Tribolium castaneum 663351 9606 Homo sapiens 6657
9544 Macaca mulatta 696412 9646 Ailuropoda melanoleuca ENSAMEG00000011029
9483 Callithrix jacchus ENSCJAG00000008401 10020 Dipodomys ordii ENSDORG00000007481
9796 Equus caballus ENSECAG00000010653 9365 Erinaceus europaeus ENSEEUG00000013305
9685 Felis catus ENSFCAG00000029205 69293 Gasterosteus aculeatus ENSGACG00000006100
8049 Gadus morhua ENSGMOG00000019777 9785 Loxodonta africana ENSLAFG00000030155
13616 Monodelphis domestica ENSMODG00000021292 7757 Petromyzon marinus ENSPMAG00000009737
9305 Sarcophilus harrisii ENSSHAG00000007719 30538 Vicugna pacos ENSVPAG00000010334

Paralogs
ENSGALG00000017372