Basic Information | |||
Gene ID | ENSORLG00000005001 | ||
Gene Name | sox4 | ||
Full Name | Uncharacterized protein | ||
Organism | Oryzias latipes [8090] |
Cross Reference | |||
UniProt | H2LJV9 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSORLP00000006304 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 63 | 141 | 2.20e-34 | High mobility group box domain |
ENSORLP00000006304 | Pfam | PF00505 | IPR009071 | 64 | 132 | 9.30e-26 | High mobility group box domain |
ENSORLP00000006304 | ProSiteProfiles | PS50118 | IPR009071 | 64 | 132 | 0.00e-00 | High mobility group box domain |
ENSORLP00000006304 | SMART | SM00398 | IPR009071 | 63 | 133 | 2.90e-30 | High mobility group box domain |
ENSORLP00000006304 | SUPERFAMILY | SSF47095 | IPR009071 | 54 | 136 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSORLP00000006304 | PF00505 | 5.7e-26 | HMG_box | HMG (high mobility group) box |
ENSORLP00000006304 | PF09011 | 3.3e-09 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSORLP00000006304 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSORLP00000006304 | GO:0005634 | cellular_component | nucleus |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7029 | Acyrthosiphon pisum | 100571300 | 9555 | Papio anubis | 101025822 |
7897 | Latimeria chalumnae | 102348377 | 9544 | Macaca mulatta | 706531 |
9913 | Bos taurus | ENSBTAG00000046556 | 9615 | Canis familiaris | ENSCAFG00000024883 |
9358 | Choloepus hoffmanni | ENSCHOG00000002300 | 9258 | Ornithorhynchus anatinus | ENSOANG00000011128 |
7425 | Nasonia vitripennis | 100123293 | 6087 | Hydra magnipapillata | 100212529 |
10224 | Saccoglossus kowalevskii | 100303598 | 9483 | Callithrix jacchus | 100388067 |
9823 | Sus scrofa | 100512542 | 400682 | Amphimedon queenslandica | 100631786 |
30195 | Bombus terrestris | 100647727 | 8128 | Oreochromis niloticus | 100706203 |
132113 | Bombus impatiens | 100743868 | 7463 | Apis florea | 100871310 |
143995 | Megachile rotundata | 100875283 | 9597 | Pan paniscus | 100986358 |
13735 | Pelodiscus sinensis | 102449995 | 10090 | Mus musculus | 20667 |
7955 | Danio rerio | 336346 | 7227 | Drosophila melanogaster | 37822 |
9598 | Pan troglodytes | 471866 | 7668 | Strongylocentrotus purpuratus | 593520 |
7070 | Tribolium castaneum | 661892 | 9606 | Homo sapiens | 6659 |
10116 | Rattus norvegicus | 689988 | 28377 | Anolis carolinensis | ENSACAG00000003013 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000011155 | 10141 | Cavia porcellus | ENSCPOG00000019926 |
9365 | Erinaceus europaeus | ENSEEUG00000003666 | 69293 | Gasterosteus aculeatus | ENSGACG00000006620 |
9595 | Gorilla gorilla | ENSGGOG00000012319 | 8049 | Gadus morhua | ENSGMOG00000001228 |
9785 | Loxodonta africana | ENSLAFG00000018401 | 9315 | Macropus eugenii | ENSMEUG00000016448 |
13616 | Monodelphis domestica | ENSMODG00000019507 | 9669 | Mustela putorius furo | ENSMPUG00000004933 |
61853 | Nomascus leucogenys | ENSNLEG00000001795 | 9986 | Oryctolagus cuniculus | ENSOCUG00000011839 |
7757 | Petromyzon marinus | ENSPMAG00000010343 | 9601 | Pongo abelii | ENSPPYG00000016272 |
132908 | Pteropus vampyrus | ENSPVAG00000000181 | 9305 | Sarcophilus harrisii | ENSSHAG00000011043 |
31033 | Takifugu rubripes | ENSTRUG00000011266 | 8364 | Xenopus tropicalis | ENSXETG00000024011 |
8083 | Xiphophorus maculatus | ENSXMAG00000009656 | 99883 | Tetraodon nigroviridis | ENSTNIG00000009619 |
9739 | Tursiops truncatus | ENSTTRG00000008502 |
Paralogs | |||
ENSORLG00000014996 |