Basic Information | |||
Gene ID | ENSORLG00000014225 | ||
Gene Name | PBX1 (2 of 2) | ||
Full Name | Uncharacterized protein | ||
Organism | Oryzias latipes [8090] |
Cross Reference | |||
UniProt | H2MGV0 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSORLP00000017844 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 231 | 299 | 1.90e-31 | Homeodomain-like |
ENSORLP00000017844 | Pfam | PF00046 | IPR001356 | 232 | 291 | 7.00e-19 | Homeobox domain |
ENSORLP00000017844 | Pfam | PF03792 | IPR005542 | 37 | 230 | 4.60e-101 | PBX |
ENSORLP00000017844 | ProSitePatterns | PS00027 | IPR017970 | 267 | 290 | - | Homeobox, conserved site |
ENSORLP00000017844 | ProSiteProfiles | PS50071 | IPR001356 | 229 | 292 | 0.00e-00 | Homeobox domain |
ENSORLP00000017844 | SMART | SM00389 | IPR001356 | 231 | 296 | 2.60e-19 | Homeobox domain |
ENSORLP00000017844 | SUPERFAMILY | SSF46689 | IPR009057 | 231 | 301 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSORLP00000017844 | PF03792 | 0 | PBC | PBC domain |
ENSORLP00000017844 | PF00046 | 3.2e-19 | Homeobox | Homeobox domain |
ENSORLP00000017844 | PF05920 | 7.6e-15 | Homeobox_KN | Homeobox KN domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSORLP00000017844 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSORLP00000017844 | GO:0045944 | biological_process | positive regulation of transcription from RNA polymerase II promoter |
ENSORLP00000017844 | GO:0005634 | cellular_component | nucleus |
ENSORLP00000017844 | GO:0005667 | cellular_component | transcription factor complex |
ENSORLP00000017844 | GO:0003677 | molecular_function | DNA binding |
ENSORLP00000017844 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSORLP00000017844 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7029 | Acyrthosiphon pisum | 100168368 | 10224 | Saccoglossus kowalevskii | 100302728 |
7227 | Drosophila melanogaster | 32567 | 7668 | Strongylocentrotus purpuratus | 580181 |
7719 | Ciona intestinalis | ENSCING00000009075 | 51511 | Ciona savignyi | ENSCSAVG00000001721 |
Paralogs | |||
ENSORLG00000006519 | ENSORLG00000013269 | ENSORLG00000016171 | ENSORLG00000016702 |