STRAP

Intuitive Editor for annotated multiple Sequence and Structure Alignments

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In case of problems introduced with the new version, use the Previous Strap version ... as a fall back.

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Interactive JavaScript and HTML5 based multiple sequence alignment for web sites

Java-based.

Visualization does not require client side Java News:

Browser based Web application for desktop PCs and tablet computers (iOS, Andreoid, MS-Mobile) which runs entirely without Java.
Please cite: Alignment-Annotator web server: rendering and annotating sequence alignments (2014) Nucleic Acids Res
Feb-2018 new version fixes problems caused by changes of external web services like EBI.
Mar-2019: Major changes. Simplified installation. Less code size and enhanced speed. Optimized user interface for Windows 10 and MacOSX. Non-attended installation of Unix tools for PDF-Graphics processing.

With this free Java software you can:

Use latest bioinformatics tools with an intuitive user interface
Compare proteins by sequence and 3D-similarity
Search protein databases
Underline important sequence positions e.g. phosphorylated or glycosylated residues
Predict secondary structure, Transmembrane helices and Coiled Coil
Create high quality figures for publications with PDF (Example), MS-Word (Example), Libre Office, Open Office and Gwrite
Export to MSF, Clustal, HSSP, Multiple Fasta and Jalview
Publish interactive protein alignments online with HTML5

More ...

Author: christoph.gille

charite

Institut für Biochemie, Charité Berlin

Compatibility apple

The Security concepts prevents damage of data and protects the user's privacy.