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Gene 1 | Gene 2 | Interaction Type | Sentence | Value | Judge me |
Ras | Rho | interact1 | A novel Rho GTPase-activating-protein interacts with Gem , a member of the Ras superfamily of GTPases . | 82 | good bad |
Ras | Raf | bind1 | At either location Raf kinase activity was inhibited by lipid binding in the absence or presence of Ras . | 79 | good bad |
Ras | Ras | complex1 | Here , the methods of continuum electrostatics are used to investigate the contribution of electrostatic interactions to the binding of four protein-protein complexes ; barnase-barstar , human growth | 51 | good bad |
Ras | p42 | interact3 | The signaling pathways that are rapidly elicited by the interaction of ouabain with Na + K + -ATPase , and are independent of changes in intracellular Na + and K + concentrations , include activation | 48 | good bad |
ras | TESK1 | interact1 | Human sprouty 4 , a new ras antagonist on 5q31 , interacts with the dual specificity kinase TESK1 . | 47 | good bad |
Ras | ceramide | interact1 | The KSR1 C1 domain does not bind with high affinity or respond biologically to phorbol esters or ceramide , and it does not interact directly with Ras , indicating that the putative ligand ( s ) for t | 43 | good bad |
Ras | CREB | bind1 | Once activated , the CaMK , Ras ERK , and SAPK pathways lead to the phosphorylation and activation of transcription factors in the nucleus such as the cyclic AMP response element binding protein ( CR | 39 | good bad |
Ras | heregulin | bind3 | We have found using differential display of mRNA that the growth factor heregulin beta 1 ( HRG ) , a combinatorial ligand for human epidermal growth factor receptors ( HERs ) , induced expression of G | 29 | good bad |
RAS | RIN1 | bind3 | At concentrations close to their equilibrium dissociation constant values , RIN1 and RAF1 compete directly for RAS binding . | 28 | good bad |
Ras | Rb | bind1 | In addition , we present evidence that cooperation between the N-terminal fragment and Ras depends upon an intact T-antigen J domain and the ability of the T antigen to bind and inactivate the growth- | 22 | good bad |
RAS | ACE | bind3 | We studied the relation between renin-angiotensin system ( RAS ) related gene polymorphisms , such as angiotensin converting enzyme ( ACE ) insertion deletion ( I D ) , angiotensinogen ( AGT ) M253T | 17 | good bad |
Ras | Notch | interact3 | Reciprocal regulatory interactions between the Notch and Ras signaling pathways in the Drosophila embryonic mesoderm . | 17 | good bad |
RAS | HGF | bind1 | Moreover , HGF binding to syndecan-1 promotes activation of the phosphatidylinositol 3-kinase protein kinase B and RAS mitogen-activated protein kinase pathways , signaling routes that have been imp | 12 | good bad |
Ras | Src | bind3 | , Ras and Src ) , or inactivation of several important actin-binding proteins that have tumor suppressive functions ( e . | 10 | good bad |
ras | GTP | bind1 | Finally , the levels of three small guanosine-5 ' -triphosphate ( GTP ) binding proteins were screened upon differentiation showing rab3A to be increased while rhoA and H-ras were decreased . | 9 | good bad |
ras | DCC | associate2 | To test this hypothesis , we investigated the age-associated changes in mutation of adenomatous polyposis coli ( APC ) , deleted in colorectal cancer ( DCC ) , p53 , and K-ras genes in the gastric muc | 8 | good bad |
ras | K-ras | associate1 | CONCLUSIONS : These findings suggest that K-ras may be associated with PTHrP-induced hypercalcaemia and that PTHrP levels may reflect the aggressiveness of tumour cells through the K-ras oncogene in R | 8 | good bad |
ras | NF1 | associate1 | There is increasing evidence that loss of NF1 expression in neoplastic Schwann cells is associated with elevated levels of activated RAS , supporting the notion that the NF1 gene product , neurofibrom | 8 | good bad |
Ras | sgk | bind3 | Several aldosterone-sensitive genes , including serum and glucocorticoid-inducible kinase ( sgk ) and small , monomeric Kirsten Ras GTP-binding protein ( Ki-ras ) have recently been identified . | 8 | good bad |
Ras | CR2 | bind1 | Disruption of 14-3-3 binding at CR2 did not recover binding of Raf-1 to ( V12 , G37 ) Ras but allowed more efficient recruitment of Raf-1 to the plasma membrane and stimulated its phosphorylation on S | 7 | good bad |
Ras | gap | associate2 | [ Effect of d-limonene , salvia miltiorrhiza and turmeric derivatives on membrane association of Ras gene product and gap junction intercellular communication ] | 7 | good bad |
ras | p15 | bind1 | Among the lines , three lines had mutations in codon 12 in K- ras , two lines harbored p53 mutations within the DNA-binding domain ; two lines had homozygous deletions in both p16 and p15 genes ; and | 7 | good bad |
Ras | Rac | associate3 | Ras and Rac are membrane-associated GTPases that function as molecular switches activating intracellular mitogen-activated protein kinase ( MAPK ) cascades and other effector pathways in response to e | 7 | good bad |
Ras | Ras | complex1 | The discovery of a new downstream target for the Ras GTPases - a Nore1-Mst1 protein complex - reveals a mechanism by which Ras can promote apoptosis , and suggests that the influence of Ras on cell su | 7 | good bad |
Ras | Rho | associate2 | However , no protein acting like Rho and Rab dissociation inhibitor ( GDI ) that regulate the membrane association of Rho and Rab GTPases has been described for Ras and closely related proteins . | 7 | good bad |
Ras | AP-1 | bind3 | Since many examples of apoptosis have been reported to involve AP-1 and or the AP-1-activating enzyme Jun kinase ( JNK ) , downstream effectors of Ras or Ras-like small GTP-binding proteins , we eval | 6 | good bad |
ras | APC | associate2 | No association was found between MSI-L ( or the level of MSI ) and any clinicopathological or molecular variable , including K-ras mutation and loss of heterozygosity at APC . | 6 | good bad |
Ras | EGF | associate1 | Elevated expression of epidermal growth factor ( EGF ) receptor in many cancers is associated with progression of superficial to invasive forms of the disease and is sometimes found in tumors that als | 6 | good bad |
Ras | Grb2 | bind2 | This resulted in increased binding of another adaptor protein Grb2 to the Src-EGFR complex and the subsequent activation of Ras and MAPKs . | 6 | good bad |
Ras | MAPK | bind1 | The Ras family of GTP-binding proteins are key transducers of extracellular signals , particularly through the mitogen-activated protein kinase ( MAPK ) pathway . | 6 | good bad |
ras | p16 | complex2 | METHODS : Expression of HCV antigens ( CP10 , NS3 and NS5 ) and several cancer-associated gene products ( ras p21 , c-myc , c-erbB-2 , mutated p53 and p16 protein ) in the tissues of hepatocellular ca | 6 | good bad |
Ras | RACK1 | associate3 | Whereas most of RACK1 resides in the cytoskeletal compartment of the cytoplasm , transformation of fibroblasts and epithelial cells by v-Src , oncogenic IR or oncogenic IGF-IR , but not by Ros or Ras | 6 | good bad |
Ras | Raf | bind1 | Ras proteins transduce extracellular signals to intracellular signaling pathways by binding to and promoting the activation of at least three classes of downstream signaling molecules : Raf kinases , | 6 | good bad |
Ras | Raf | bind1 | The analysis of the missense mutations indicates that Ras binding , 14-3-3-binding , and protein kinase activity are necessary for full Raf function and suggests that a 14-3-3 protein positively regul | 6 | good bad |
Ras | GTP | associate1 | Ras association with Raf was GTP dependent as previously demonstrated for C-Raf-RBD fragments . | 5 | good bad |
RAS | NF1 | associate1 | BACKGROUND : The effectiveness of percutaneous transluminal angioplasty ( PTA ) in renal artery stenosis ( RAS ) associated with neurofibromatosis type 1 ( NF1 ) has not been established . | 5 | good bad |
Ras | p65 | associate1 | The resultant chimeric p65 ( Tpr-Met ) protein is constitutively phosphorylated on tyrosine residues in vivo and associates with a number of SH2-containing signaling molecules including the p85 subuni | 5 | good bad |
ras | TESK1 | interact1 | Human sprouty 4 , a new ras antagonist on 5q31 , interacts with the dual specificity kinase TESK1 . | 5 | good bad |
ras | TNM | associate2 | No statistically significant association between results of K-ras mutations and TNM stage of disease was found . | 5 | good bad |
Ras | calcineurin | interact1 | Wing and eye phenotypes of ectopic activated calcineurin and genetic interactions with components of signaling pathways suggested a role for calcineurin in repressing Egf receptor Ras signal transduc | 4 | good bad |
Ras | EF | bind1 | RasGRP4 contains the same protein domain structure as other members of the RasGRP family , including a Ras exchange motif , a CDC25 homology domain , a C1 diacyglycerol binding domain , and putative | 4 | good bad |
Ras | ERK1 | interact3 | The inhibition of Grb2-SOS interaction with an SH3 binding sequence peptide , Ras with a farnesyl transferase inhibitor , and Raf-1 with forskolin did not affect the stretch-induced ERK1 2 phosphoryl | 4 | good bad |
Ras | GTP | bind1 | The small guanosine triphosphate ( GTP ) binding protein Ras is involved in many cellular signal transduction processes leading to cell growth , differentiation and apoptosis . | 4 | good bad |
Ras | Pak1 | bind1 | Pak1 ( L83 , L86 , R299 ) , a mutant that fails to bind either Rac or Cdc42 , also inhibited Ras transformation . | 4 | good bad |
Ras | Raf | interact2 | We used Ras and Raf proteins in the yeast two-hybrid system to search for natural or synthesized substances capable of modulating Ras Raf interaction by specifically binding to one of the interacting | 4 | good bad |
Ras | Rho | bind1 | The Rho family of proteins , incluing the Rho , Rac and Cdc42 subfamilies , are related to the small GTP binding protein Ras and regulated diverse biological processes including gene transcription , c | 4 | good bad |
Ras | Rho | bind3 | Studies with Ras and Rho have elucidated the mechanism of GAP action by showing that their catalytic machinery is both stabilized by GAP binding and complemented by the insertion of a so-called ' argi | 4 | good bad |
Ras | Rho | complex1 | Dystrophin-glycoprotein complex and Ras and Rho GTPase signaling are altered in muscle atrophy . | 4 | good bad |
ras | map | complex1 | coli nucleotide excision enzyme complex , UvrABC nucleases in combination with ligation-mediated polymerase chain reaction , we developed a method to map DNA damage in the p53 and ras genes . | 3 | good bad |
Ras | Raf | associate1 | Cytosolic GTP-bound Ras mutants could be used to inhibit particular Ras effectors by introducing additional mutations ( T35S , E37G or Y40C ) that permit them to associate selectively with and inhibit | 3 | good bad |
ras | APC | associate2 | The characteristics and very existence of low-level instability ( MSI-L ) are unclear , although some studies have found associations between MSI-L and molecular characteristics , notably more frequen | 1 | good bad |
RAS | B8 | associate2 | To characterize genetic events associated with B8 mouse astrocytoma formation , we employed comparative gene expression profiling of wild-type cultured mouse astrocytes , non-neoplastic B8 astrocytes | 1 | good bad |
Ras | TC21 | interact1 | In this study , we determined that TC21 interacts strongly with some ( RalGDS , RGL , RGL2 Rlf , AF6 , and the phosphatidylinositol 3-kinase ( PI3K ) catalytic subunit p110delta ) , and weakly with o | 1 | good bad |
RAS | RAF1 | bind1 | We demonstrate that the RAS effector protein RIN1 binds to activated RAS with an affinity ( K ( d ) , 22 nM ) similar to that observed for RAF1 . | 0 | good bad |
RAS | HLA | interact3 | Cox proportional hazards estimation showed no interactions between the observed effect of CYP11B2 genotype on renal function over time and the number of HLA class I and II matches , other RAS genotype | -1 | good bad |
Ras | actin | interact1 | Because Ras homologous protein ( Rho ) induces actin microfilament polymerization , interacts with microtubules , and is believed to be activated by growth factors , we set forth to study the regulato | -11 | good bad |
Ras | Src | associate3 | CRCs accompanied by ulcerative colitis , chronic inflammation in the colon , often have elevated Src activity , and ulcerative colitis-related CRCs are more likely to become invasive , whereas Ras act | -15 | good bad |
Ras | MST1 | associate1 | Endogenous NORE and MST1 occur in a constitutive complex in vivo that associates with endogenous Ras after serum stimulation . | -16 | good bad |
Ras | Msn2 | complex1 | Together , our results suggest that the Ccr4-Not complex may function as an effector of the Ras cAMP pathway that contributes to repress basal , stress- and starvation-induced transcription by Msn2 | -18 | good bad |
ras | myc | associate2 | In Western countries , most cases of PT-LPD are B-cell-derived and Epstein-Barr virus-associated , in which alterations of c-myc , p53 , and N-ras genes might play a role in disease progression . | -30 | good bad |
ras | D1 | associate2 | There were no significant associations between cyclin D1 overexpression and k-ras mutation or response to 5FU . | -33 | good bad |
RAS | SHS | interact3 | However , the potential interaction between SHS and the RAS is unknown . | -36 | good bad |
ras | c-myc | associate3 | Cotransfection of rat embryo fibroblasts with c-myc and activated H-ras oncogenes is one experimental model of the multistep oncogenesis associated with p53 mutations and aneuploidy . | -43 | good bad |
Ras | EBP | bind3 | The current study demonstrates that activated Ras enhances the ability of C EBPalpha to transactivate the G-CSF receptor promoter and a minimal promoter containing only C EBP DNA binding sites . | -47 | good bad |
Ras | GTP | bind1 | In contrast , the GTP analogue 3 , 4-diaminobenzophenone ( DABP ) -phosphoramidate-GTP , a substrate for GTP-binding proteins , enables switching to the inactive GDP form in both wild-type and oncogen | -72 | good bad |
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Text2Knowledge ... Yong Huang
2002
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