F E A T U R E S


In order to facilitate structural analysis, VeaR has features like:
  • automated retrieval of crystallographic data by PDB id,
  • loading a PDB file from the local filesystem or local network,
  • chain selection in case of multidomain proteins,
  • basic structure integrity verification, automated disulfide bonds recognition,
  • calculation of φ and ψ torsional angles and plotting Ramachandran map (with the ellipse-path limited conformational sub-space marked),
  • calculation of V and ln(R) parameters and plotting them (with empirical parabolic function marked),
  • plotting V , ln(R), deviation of measured and theoretical values of V and ln(R) versus parabolic curve and absolute value of the last - along the chain,
  • highlighting abovementioned parameters - on the 3D backbone representation, various color schemes,
  • full-screen rendering,
  • built-in support for dumping screenshots (iff launched on a linux machine)