R E F E R E N C E S

   BiBTEX entries   


Model

  • Roterman I (1995) Modelling of optimal simulation path in the peptide chain folding - Studies based on geometry of alanine heptapeptide J Theor Biol 177, 283-288. [abstract] [full text]

  • Roterman I (1995) The geometrical analysis of polypeptide backbone structure and its local deformation. Biochimie 77, 204-216. [abstract] [full text]


Applications

  • Roterman I, Konieczny L (1995) Geometrical analysis of structural changes in immunoglobin domains' transition from native to molten state. Comput Chem 19, 247-252. [abstract] [full text]

  • Leluk J, Konieczny L, Roterman I (2003) Search for structural similarity in proteins. Bioinformatics 19, 117-124. [abstract] [full text]

  • Brylinski M, Jurkowski W, Konieczny L, Roterman I (2004) Limited conformational space for early-stage protein folding simulation. Bioinformatics 20, 199-205. [abstract] [full text]

  • Jurkowski W, Brylinski M, Konieczny L, Wisniowski Z, Roterman I (2004) The conformational sub-space in simulation of early-stage protein folding. Proteins 55, 115-127. [abstract]

  • Brylinski M, Jurkowski W, Konieczny L, Roterman I (2004) Limitation of conformational space for proteins - early-stage folding simulation of human α and β hemoglobin chains. TASK Quarterly 8, 413-422. [abstract]

  • Jurkowski W, Brylinski M, Konieczny L, Roterman I (2004) Lysozyme folded in silico according to the limited conformational sub-space. J Biomol Struct Dyn 22, 149-158. [abstract] [full text]

  • Brylinski M, Konieczny L, Roterman I (2004) SPI - Structure predictability index for protein sequences. In Silico Biol 5, 0022. [abstract] [full text]

  • Brylinski M, Konieczny L, Czerwonko P, Jurkowski W, Roterman I (2005) Early-stage folding in proteins (in silico) - sequence to structure relation. J Biomed Biotechnol 2, 65-79. [abstract] [full text]