These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10105#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 23 consensus length = 1618 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCG-GCCCGCATCCCGGATGATAATGTTGTTGGATCAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATCAGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAGAAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCACAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT-CATT--GC-AAG-CACT--GCT--GGC--A-GCTGCTGAGCCGGACGATCCACA-GGATGCGGTCGTTGCTACGCAGTACAAAGACAACCACGAAATGTTCATCCTGACGGCAAAGCATT-GGACCAACGTGTATGCAGGTGGTCCGTTTGCAAATGCCGATTTTGATCAGAAGGTTCAACGATTGCGTGATATGGGTATCCCGGCGTACGATGCCCGAGCCGCCCTTTCACGCCACAAC-TGGCATC-T-GGAACGTGCGTCTGAACAGCTATTCAGTTAGTCTCTTTGTGGGTAATGTTCGACCGCCTCCCGCCCCCATACTCGATGTTTTTATTTGTGTTTTCCTTTGCAAATGACGTG-TTTTTTTTCTCGTAGCCAGGGTATTCCTTTTTAAATACAGAAAAGTGCGTTTTCGTGAAGTTTTAAATTAAACCGTTCTCTTAATGATCCAAAGTACCGTTGGAAACGTTAGCAACTGATACAAATGTTACATGTTTTGTGATATCATCAATCAGTAACCTTCGGTAAGTTTTTGTTTTCTGCTGGAATACACAAATACAGAACCACCGTCATTTCGCAACCGAGGATTG-TTTTTCCATAATGTATGTATACTATACTATCATAAAAGAATGGATCGAAACCAAGCAAATGAGCAATACATGGCTTACAACGTGAAAAGACAGCTTAAATTATATTGCGTTGGTGCAAAGATAACTATTAGTGGTTGTTAGTATGAGGAAACGCATGGAAAGGAGCACAGTAAAGAGAACTGTGAATGAAAATCGATAAAGCTAAACACAC--TTTCATTGCCGTAATCCTTCCTGGGGTTGTACAGAAACCTAGTGCACACGTTTGGTAGAAAAAG-AAATAAACCAATCCAACAACACACAAAGCTCGACTCTTTTGAAAACAAGTTAGCAGCAACTGAGTTATTCGCTCATTCCATTCCGTTCGTAAAGAAAATACTTGGCAAAGAGCAATTATTACGGCTGCAAATAAAGTAAAACTAAAAAGATCGTTTCAAATGTAAAAAAAA] [+] EMBL BM625125 [CCGCCCACGCGTCCGCCCACGCGTCCG GCCCGCATCCCGGATGATAATGTTGTTGGATCAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATCAGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAGAAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCACAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A GCTGCTGAGCCGGACGATCCACA GGATGCGGTCGTTGCTACGCAGTACA ] [+] EMBL BM646199 [ CCGAGCCCGCATCCCGGATGATAATGTTGTTGGATCAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATCAGCAATTACCCAGAGTCATA CCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAGAAAAATACAAAAAATACAGCCACATAGCTTCCGAGATTTACTGCATAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A GCTGCTGAGCCGGACGATCCACAGGGATGCGGTCGTTGCTACGCAGTACAAAGACAACCACGAAATGTTCATCCTGACGGCAAAGCATTGGGACCAACGTGTATGCAGGTGGTCCGTTTGCAA ] [+] EMBL CNS08TOR [ aaaactctc GCGCGCATCCCGGATGATAATGTTGTTGGATCAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATCAGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAGAAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCATAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A GCTGCTGAACCGGACGATCCACA GGATGCGGTCGTTGCTACGC GTACAAAGACAACCACGAAATGTTCATCCTGACGGCAAAGCATT GGACCAACGTGTATGCAGGTGGTCCGTTTGCAAATGCCGATTTTGATCAGAAGGTTCAACGATTGCGTGATATGGGTATCCCGGCGTACGATGCCCGAGCCGCCCTTTCACGCCACAAC TGGCATCTT GGAACGTGCGTTTGAACAGCTATTCAGTTAGTCTCTTTGTGGGTAATGTTCGACCGCCTCCCGCCCCCATACTCGATGTTT ] [+] EMBL BM581956 [ CCGGGATGATAATGTTGTTGGATCAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATCAGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAGAAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCACAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A GCTGCTGAGCCGGACGATCCACA GGATGCGGTCGTTGCTACGCAGTACAAAGACAACCACGAAATGTTCATCCTGACGG ] [+] EMBL BM588920 [ CCGGGATGATAATGTTGTTGGATCAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATCAGCAATTACCCAGAGTCATA CCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAGAAAAATACAAAAAATACAGCCACATAGCTTCCGAGATTTACTGCATAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A GCTGCTGAGCCGGACGATCCACAGGGATGCGGTCGTTGCTACGCAGTACAAAGACCACCACGAAATGTTCATCCTGA ] [+] EMBL CNS08JAA [ CCGGATGATAATGTTGTTGGATCAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATCAGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAGAAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCATAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A GCTGCTGAACCGGACGATCCACA GGATGCGGTCGTTGCTACGCA TACAAAGACAACCACGAAATGTTCATCCTGACGGCAAAGCATT GGACCAACGTGTATGCAGGTGGTCCGTTTGCAAATGCCGATTTTGATCAGAATGTTCA ] [+] EMBL CNS090JB [ ATAATGTTGTTGGATCAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATCAGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAGAAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCATAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A GCTGCTGAACCGGACGATCCACA GGATGCGGTCGTTGCTACGCAG ACAAAGACAACCACGAAATGTTCATCCTGACGGCAAAGCATT GGACCAACGTGTATGCAGGTGGTCCGTTTGCAAATGCCGATTTTGATCAGAAGGTTCAACGATTGCGTGATATGGGTATCCCGGCGTACGATGCCCGAGCCGCCCTTTCACGCCACAAC TGGCATC T TGAACG ] [+] EMBL BM603547 [ ccgGTTGGATCAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATCAGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAGAAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCACAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A GCTGCTGAGCCGGACGATCCACAGGGATGCGGTCGTTGCTACGCAGTACAAAGACAACCACGAAATGTTCATCCTGACGGCAAAGCATT GGACCAACGTGTATGCAGGTGGTC ] [+] EMBL BM586302 [ ccgGTTGGATCAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATCAGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAGAAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCACAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A GCTGCTGAGCCGGACGATCCACA GGATGCGGTCGTTGCTACGCAGTACGAAGACAACCACGAAATGTTCATCCTGACGGCAAAGCATT GGACCAAC ] [+] EMBL BM632908 [ ccgCAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATCAGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAGAAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCACAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A GCTGCTGAGCCGGACGATCCACA GGATGCGGTCGTTGCTACGCAGTACAAAGACAACCACGAAATGTTCATCCTGACGGCAAAGCATT GGACCAACGTGTATGCAGGTGGTCCGTTTGCAAATGC ] [+] EMBL BX623797 [ CATTGAGACGAAAGTAAACTGCACTATCATCATCAGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAGAAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCATAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTGACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AA ] [+] EMBL BX625359 [ AAAGTGAACTGCACTATCATCATCAGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGTTACTCGCCAGAAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCACAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A GCTGCTGAGCCGGACGATCCACA GGATGCGGTCGTTGCTACGCAGTACAAAGACAACCACGAAATGTTCATCCTGACGGCAAAGCATT GGACCAACGTGTATGCAGGTGGTCCGTTTGCAAATGCCGATTTTGATCAGAANGTTCAACGATTGCGGGATATGGGTATCCCGGCGTACGATGCCCGAGCCGCCCTTTCACGCCACAAC TGGCATC TGGGAACGTGCGTCTGAACAGCTATTCAGTTAGTCTCTTTGTGGGTAATGTTCGACCGCCTCCCGCCCCCATACTCGA ] [+] EMBL AGA284735 [ AAAAAATACGGCCACATAGCTTCCGAGATTTACTGCACAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A ] [-] EMBL CNS08TOS [ ATTTACTGCATAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCCCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGAATGGTGCGATTTGTCTCGACATACTAAAAGAAAATTGGGCTGCTGCGATGAACCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A GCTGCTGAACCGGACGATCCACA GGATGCGGTCGTTG TACGCAGTACAAAGACAACCACGAAATGTTCATCCTGACGGCAAAGCATT GGACCAACGTGTATGCAGGTGGTCCGTTTGCAAATGCCGATTTTGATCAGAAGGTTCAACGATTGCGTGATATGGGTATCCCGGCGTACGATGCCCGAGCCGCCCTTTCACGCCACAAC TGGCATC T GGAACGTGCGTCTGAACAGCTATTCAGTTAGTCTCTTTGTGGGTAATGTTCGACCGCCTCCCGCCCCCATACTCGATGTTTTTATTTGTGTTTTCCTTTGCAAATGACGTG TTTTTTTTCTCGTAGCCAGGGTATTCCTTTTTAAATACAGAAAAGTGCGTTTTCGTGAAGTTTTAAATTAAACCGTTCTCTTAATGATCCAAAGTACCGTTGGAAACGTTAGCAACTGATACAAATGTTACATGTTT ] [+] EMBL BX606479 [ ACAACTTTATGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A GCTGCTGAACCGGACGATCCACA GGATGCGGTCGTTGCTACGCAGTACAAAGACAACCACGAAATGTTCATCCTGACGGCAAAGCATT GGACCAACGTGTATGCAGGTGGTCCGTTTGCAAATGCCGATTTTGATCAGAAGGTTCAACGATTGCGTGATATGGGTATCCCGGCGTACGATGCCCGAGCCGCCCTTTCACGCCACAAC TGGCATC T GGAACGTGCGTCTGAACAGCTATTCAGTTAGTCTCTTTGTGGGTAATGTTCGACCGCCTCCCGCCCCCATACTCGATGTTTTTATTTGTGTTTTCCTTTGCAAATGACGTG TTTTTTTTCTCGTAGCCAGGGTATTCCTTTTTAAATACAGAAAAGTGCGTTTTCGTGAAGTTTTAAATTAAACCGTTCTCTTAATGATCCAAAGTACCGTTGGAAACGTTAGCAACTGATACAAATGTTACATGTTTTGTGATATCATCAATCAGTAACCTTCGGTAAGTTTTTGTTTTCTGCTGGAATACACAAATACAGAACCACCGTCATTTCGCAACCGAGGATTG TTTTTCCATAATGTATGTATACTATACTATCATAAAAGAATGGATCGAAACCAAGCAAATGAGCAATACATGG ] [+] EMBL BM621010 [ ccgTGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A GCTGCTGAGCCGGACGATCCACA GGATGCGGTCGTTGCTACGCAGTACAAAGACAACCACGAAATGTTCATCCTGACGGCAAAGCATT GGACCAACGTGTATGCAGGTGGTCCGTTTGCAAATGCCGATTTTGATCAGAAGGTTCAACGATTGCGTGA ] [+] EMBL BM604713 [ ccGCTGGACCACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGTGCGATTTGTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTATCCATTTGGCAAAGCCACTTGGCTTGGGCCAAGGCTGCTGAGCCGGACGATCCACA GGATGCGGTCGTTGCTACGCAGTACAAAGACAACCACGAAA ] [-] EMBL CNS090JC [ CGATTTGTATCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT CATT GC AAG CACT GCT GGC A GCTGCTGAACCGGACGATCCACA GGATGCGGTCGTTG TACGCAGTACAAAGACAACCACGAAATGTTCATCCTGACGGCAAAGCATT GGACCAACGTGTATGCAGGTGGTCCGTTTGCAAATGCCGATTTTGATCAGAAGGTTCAACGATTGCGTGATATGGGTATCCCGGCGTACGATGCCCGAGCCGCCCTTTCACGCCACAAC TGGCATC A GGAACGTGCGTCTGAACAGCTATTCAGTTAGTCTCTTTGTGGGTAATGTTCGACCGCCTCCCGCCCCCATACTCGATGTTTTTATTTGTGTTTTCCTTTGCAAATGACGTG TTTTTTTTCTCGTGGCCAGGGTATTCCTTTTTAAATACAGAAA ] [-] EMBL CNS08JAB [ CGATCCACA GGATGCGGTCGTTG TACGCAGTACAAAGAAAACCACGAAATGTTCATCCTGACGGCAAAGCATT GGACCAACGTGTATGCAGGTGGTCCGTTTGCAAATGCCGATTTTGATAAGAAGGTTCAACGATTGCGTGATATGGGTATCCCGGCGTACGATGCCCGAGCCGCCCTTTCACGCCACAAC TGGCATC T GGGACGTGCGTCTGAACAGCTATTCAGTTAGTCTCTTTGTGGGTAATGTTCGACCGCCTCCCGCCCCCATACTCGATGTTTTTATTTGTGTTTTCCTTTGCAAATGACGTG TTTTTTTTCTCGTAGCCAGGGTATTCCTTTTTAAATACAGAAAAGTGCGTTTTCGTGAAGTTTTAAATTAAACCGTTCTCTTAATGATCCAAAGTACCGTTGGAAACGTTAGCAACTGATACAAATGTTACATGTTTTGT ] [-] EMBL CNS08ICS [ CCGGCGTACGATGCCCGAGCCGCCCTTTCACGCCACAACTTGGCATT T GGAACGTGCGTCTGAACAGCTATTCAGTTAGTCTCTTTTTGGGTAATGTTCGACCGCCTCCCGCCCCCATACTCGATGTTTTTATTTGTGTTTTCCTTTGCAAATGACGTGTTTTTTTTTCTCGTAGCCAGGGTATTCCTTTTTAAATACAGAAAAGTGCGTTTTCGTGAAGTTTTAAATTAAACCGTTCTCTTAATGATCCAAAGTACCGTTGGAAACGTTAGCAACTGATACAAATGTTACATGTTTTGTGATATCATCAATCAGT ACCTTCGGTAAGTTTTTGTTTTCTGCTGGA ] [+] EMBL BX608034 [ AACAGCTATTCAGTTAGTCTCTTTGTGGGTAATGTTCGACCGCCTCCCGCCCCCATACTCGATGTTTTTATTTGTGTTTTCCTTTGCAAATGACGTG TTTTTTTTCTCGTAGCCAGGGTATTCCTTTTTAAATACAGAAAAGTGCGTTTTCGTGAAGTTTTCAATTAAACCG TGATCCAAAGTACCGTTGGAAACGTTAGCAACTGATACAAATGTTACATGTTTTGTGATATCATCAATCAGTAAACTTCGGTAAGTTTTTGTTTTCTGCTGGAATACACAAATACAGAACCACCGTCATTTCGCAACCGAGGATTGTTTTTTCCATAATGTATGTATACTATACTATCATAAAAGAATGGATCGAAACCAAGCAAATGAGCAATACATGGCTTACAACGTGAAAAGACAGCTTAAATTATATTGCGTTGGTGCAAAGATAACTATTAGTGGTTGTTAGTATGAGGAAACGCATGGAAAGGAGCACAGTAAAGAG ] [-] EMBL AGA283439 [ TTACAACGTGAAAAGACAGCTTAAATTATATTGCGTTGGTGCAAAGATAACTATTAGTGGTTGTTAGTATGAGGAAACGCATGGAAAGGAGCACAGTAAAGAGAACTGTGAATGAAAATCGATAAAGCTAAACACAC TTTCATTGCCGTAATCCTTCCTGGGGTTGTACAGAAACCTAGTGCACACGTTTGGTAGAAAAAG AAATAAACCAATCCAACAACACACAAAGCTCGACTCTTTTGAAAACAAGTTAGCAGCAACTGAGTTATTCGCTCATTCCATTCCGTTCGTAAAGAAAATACTTGGCAAAGAGCAATTATTACGGCTGCAAATAAAGTAAAACTAAAAAGATCGTTTCAAATGTAAAAAAAA] [+] EMBL CNS08LKI [ AGAACTGTGAATG AAATCGATAAAGCTAAAAACACTTTTTCATTGCCGTAATCCTTCCTCGGGTTGTACAGAAACCTAGTGCACACATTTGGTAGAAAAAGCAAATAAACCAATCCAACAACACACAAAGCTCGGCTCTTTTGAAAACAAGTTAGCAGCAACTGAGTTATTCGCT CATTCCGTTCGTAAAGAAAATACTTGGCAAAGAGCAATTATTACGGCTACAAATAAAGTAAAACAAAAAA ] consensusID : consensus_10105#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 657 fasta sequence [CCGAAGCACCCAAAAAGAAACCAGCAGCCCGCATCCCGGATGATAATGTTGTTGGATCAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATCAGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAGAAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCACAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACC-ACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTAACAAGAACACCGGCATCAGCGATGATAATAAACGCGTAGAGAGTGAGAGAGAGTAGGAGACAAACAGAGAAGTAAAAACGTGCTTAATTTTCTAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGGTGCGATTTGTCTCGACATACTAAAAGACAAT] [+] EMBL BM607832 [CCGAAGCACCCAAAAAGAAACCAGCAGCCCGCATCCCGGATGATAATGTTGTTGGATCAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATCAGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAGAAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCACAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACC ACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAAGGTAACAAGAACACCGGCATCAGCGATGATAATAAACGCGTAGAGAGTGAGAGAGAGTAGGAGACAAACAGAGAAGTAAAAACGTGCTTAATTTTCTAGGTGAAATTTGTGACAAAAATATGGCATCCTAACATCTCGTCTGTGACTGGGTGCGATTTGTCTCGACATACTAAAAGACAAT] [+] EMBL CNS08ICR [ AAAACAGCAG CCGCAT CCGGATGATAATGTTGTTGGATCAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATCAGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAGAAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCATAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCAACCCGACACGCCATACGAA GAGG AAGTTTGTGTTAGAAATAAA ] [+] EMBL AL932526 [ cgaggTCACATCTTCTGTTGGT ATACATTGAGACGAAAGT AACTGCACTATCATCATCAGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGTTACTCGCCAGAAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCACAACCATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATCAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACC ACCCGACACGCCATACGAAGGAGGAAAGTTTGTGTTAGAAATAAAGGT ] consensusID : consensus_10105#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 298 fasta sequence [CCGAGGTTATATGCCGCAGCGTTATCATCTACCTCGTTACTCGCCAGAAAAATACAAAAATACGGGCACATAGCTTCCGAGATTTACTGGCAAACATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGGGAATATGGGAGTATTCCGCATCTAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGGTGGACACCGAACGCCATACGAAGGAGGAAAGTTTGTGT] [+] EMBL AL930630 [CCGAGGTTATATGCCGCAGCGTTATCATCTACCTCGTTACTCGCCAGAAAAATACAAAAATACGGGCACATAGCTTCCGAGATTTACTGGCAAACATCATCTAGCAGAGGAACACCGTACTGTGTAACTATGGGGAATATGGGAGTATTCCGCATCTAAAAGAGAGTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAATGGTAAATGACAACTTTACGGAACTGAGGGGCGAGATTGGTGGACACCGAACGCCATACGAAGGAGGAAAGTTTGTGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10105#1 ---CCGAAGCACCCAAAAAGAAACCAGCAGCCCGCATCCCGGATGATAATGTTGTTGGAT 57 consensus_10105#2 ------------------------------------------------------------ consensus_10105#0 CCGCCCACGCGTCCGCCCACGCGTC--CGGCCCGCATCCCGGATGATAATGTTGTTGGAT 58 consensus_10105#1 CAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATC 117 consensus_10105#2 ------------------------------------------------------------ consensus_10105#0 CAATTTCACATCTTCTGTTGGTAATACATTGAGACGAAAGTAAACTGCACTATCATCATC 118 consensus_10105#1 AGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAG 177 consensus_10105#2 ---------CCGAGGTTATA--TGCCGC-AGCGTTATCATCTACC-TCGTTACTCGCCAG 47 consensus_10105#0 AGCAACTACCCAGAGTCATACTTGCCGCCAGCGTTATCATCTACCCTCGCTACTCGCCAG 178 ** ** *** ****** **************** *** ********** consensus_10105#1 AAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCACAACCATCATCTAGC 237 consensus_10105#2 AAAAATACAAAAA-TACGGGCACATAGCTTCCGAGATTTACTG-GCAAACATCATCTAGC 105 consensus_10105#0 AAAAATACAAAAAATACGGCCACATAGCTTCCGAGATTTACTGCACAACCATCATCTAGC 238 ************* ***** *********************** *** *********** consensus_10105#1 AGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATC-AAAAGAGA 296 consensus_10105#2 AGAGGAACACCGTACTGTGTAACTATGGGGAATATGGGAGTATTCCGCATCTAAAAGAGA 165 consensus_10105#0 AGAGGAACACCGTACTGTGTAACTATGGCGAATATGGCAGTATCCCGCATC-AAAAGAGA 297 **************************** ******** ***** ******* ******** consensus_10105#1 GTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGT 356 consensus_10105#2 GTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAA-TGGT 224 consensus_10105#0 GTTTAAGGAGGTTCTTAAAAGTGAAGAGATCACACAATGCTCTATTAAGTTGGAAATGGT 357 ******************************************************* **** consensus_10105#1 AAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGA 416 consensus_10105#2 AAATGACAACTTTACGGAACTGAGGGGCGAGATTGGTGGACA--CCGA-ACGCCATACGA 281 consensus_10105#0 AAATGACAACTTTACGGAACTGAGGGGCGAGATTGCTGGACCACCCGACACGCCATACGA 417 *********************************** ***** **** *********** consensus_10105#1 AGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAA 476 consensus_10105#2 AGGAGGAAAGTTTGTGT------------------------------------------- 298 consensus_10105#0 AGGAGGAAAGTTTGTGTTAGAAATAAAGGTCCCAGAAACGTACCCTTTCAATCCTCCCAA 477 ***************** consensus_10105#1 GGTAACAAGAAC-ACCGGCATCAGCGATGATAATAAACGCGTAGAGAGTGAGAGAGAGTA 535 consensus_10105#2 ------------------------------------------------------------ consensus_10105#0 GGTGAAATTTGTGACAAAAATATGGCATCCTAACAT-CTCGTCTGTGACTGGTGCGATTT 536 consensus_10105#1 GGA--GACAAACAGAGAAGTAAAAACG-TGCT----TAATTTTCTAGGTGAAATTTGTGA 588 consensus_10105#2 ------------------------------------------------------------ consensus_10105#0 GTCTCGACATACTAAAAGACAATTGGGCTGCTGCGATGACCCTGCGGACGGTATTGCTAT 596 consensus_10105#1 CAA---AAATA----TGGCATCCTAACATCTCGTCTGTG-ACTGGGTGCGATTTGTCTCG 640 consensus_10105#2 ------------------------------------------------------------ consensus_10105#0 CATTGCAAGCACTGCTGGCAGCTGCTGAGCCGGACGATCCACAGGATGCGGTC-GTTGCT 655 consensus_10105#1 ACATACTA-AAAGACAAT------------------------------------------ 657 consensus_10105#2 ------------------------------------------------------------ consensus_10105#0 ACGCAGTACAAAGACAACCACGAAATGTTCATCCTGACGGCAAAGCATTGGACCAACGTG 715 consensus_10105#1 ------------------------------------------------------------ consensus_10105#2 ------------------------------------------------------------ consensus_10105#0 TATGCAGGTGGTCCGTTTGCAAATGCCGATTTTGATCAGAAGGTTCAACGATTGCGTGAT 775 consensus_10105#1 ------------------------------------------------------------ consensus_10105#2 ------------------------------------------------------------ consensus_10105#0 ATGGGTATCCCGGCGTACGATGCCCGAGCCGCCCTTTCACGCCACAACTGGCATCTGGAA 835 consensus_10105#1 ------------------------------------------------------------ consensus_10105#2 ------------------------------------------------------------ consensus_10105#0 CGTGCGTCTGAACAGCTATTCAGTTAGTCTCTTTGTGGGTAATGTTCGACCGCCTCCCGC 895 consensus_10105#1 ------------------------------------------------------------ consensus_10105#2 ------------------------------------------------------------ consensus_10105#0 CCCCATACTCGATGTTTTTATTTGTGTTTTCCTTTGCAAATGACGTGTTTTTTTTCTCGT 955 consensus_10105#1 ------------------------------------------------------------ consensus_10105#2 ------------------------------------------------------------ consensus_10105#0 AGCCAGGGTATTCCTTTTTAAATACAGAAAAGTGCGTTTTCGTGAAGTTTTAAATTAAAC 1015 consensus_10105#1 ------------------------------------------------------------ consensus_10105#2 ------------------------------------------------------------ consensus_10105#0 CGTTCTCTTAATGATCCAAAGTACCGTTGGAAACGTTAGCAACTGATACAAATGTTACAT 1075 consensus_10105#1 ------------------------------------------------------------ consensus_10105#2 ------------------------------------------------------------ consensus_10105#0 GTTTTGTGATATCATCAATCAGTAACCTTCGGTAAGTTTTTGTTTTCTGCTGGAATACAC 1135 consensus_10105#1 ------------------------------------------------------------ consensus_10105#2 ------------------------------------------------------------ consensus_10105#0 AAATACAGAACCACCGTCATTTCGCAACCGAGGATTGTTTTTCCATAATGTATGTATACT 1195 consensus_10105#1 ------------------------------------------------------------ consensus_10105#2 ------------------------------------------------------------ consensus_10105#0 ATACTATCATAAAAGAATGGATCGAAACCAAGCAAATGAGCAATACATGGCTTACAACGT 1255 consensus_10105#1 ------------------------------------------------------------ consensus_10105#2 ------------------------------------------------------------ consensus_10105#0 GAAAAGACAGCTTAAATTATATTGCGTTGGTGCAAAGATAACTATTAGTGGTTGTTAGTA 1315 consensus_10105#1 ------------------------------------------------------------ consensus_10105#2 ------------------------------------------------------------ consensus_10105#0 TGAGGAAACGCATGGAAAGGAGCACAGTAAAGAGAACTGTGAATGAAAATCGATAAAGCT 1375 consensus_10105#1 ------------------------------------------------------------ consensus_10105#2 ------------------------------------------------------------ consensus_10105#0 AAACACACTTTCATTGCCGTAATCCTTCCTGGGGTTGTACAGAAACCTAGTGCACACGTT 1435 consensus_10105#1 ------------------------------------------------------------ consensus_10105#2 ------------------------------------------------------------ consensus_10105#0 TGGTAGAAAAAGAAATAAACCAATCCAACAACACACAAAGCTCGACTCTTTTGAAAACAA 1495 consensus_10105#1 ------------------------------------------------------------ consensus_10105#2 ------------------------------------------------------------ consensus_10105#0 GTTAGCAGCAACTGAGTTATTCGCTCATTCCATTCCGTTCGTAAAGAAAATACTTGGCAA 1555 consensus_10105#1 ------------------------------------------------------------ consensus_10105#2 ------------------------------------------------------------ consensus_10105#0 AGAGCAATTATTACGGCTGCAAATAAAGTAAAACTAAAAAGATCGTTTCAAATGTAAAAA 1615 consensus_10105#1 --- consensus_10105#2 --- consensus_10105#0 AAA 1618 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||