These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10138#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 884 fasta sequence [TAGTTTTGTAAATCCCAGCAGTAAAGTATGGTTATTTTTGTTGTTGAAAAGGGTTGTCTTGTTTACAGCTACCAAGCGGCCTGTTGATAGCATTGATAAAGCGTATGGCTCATGCACCAAAACACTTCAGCTAGTGGTGTAAATCCAATGAATCACGTTTAAAAAACACACTTAAACCTTAATCGTGTCTGTTGCTAGTGTTTGTAACTATTGTAACATAAATTGGCTGATAAGAAACTGGTAGAAATTGTTAGGTAAAACTCATTTATTAGCACACCTTTAAATTTGTGTTTTTTT-AACAAATCAATACTTTATTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTTCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGAATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCCACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAATGTGTTCCGGCACTGAATTTTTTCCAGTTCCAGTTGGCCAACAGTTCTCGAGGAATTCCGCAGCCTTAAGACC] [-] EMBL BM633530 [TAGTTTTGTAAATCCCAGCAGTAAAGTATGGTTATTTTTGTTGTTGAAAAGGGTTGTCTTGTTTACAGCTACCAAGCGGCCTGTTGATAGCATTGATAAAGCGTATGGCTCATGCACCAAAACACTTCAGCTAGTGGTGTAAATCCAATGAATCACGTTTAAAAAACACACTTAAACCTTAATCGTGTCTGTTGCTAGTGTTTGTAACTATTGTAACATAAATTGGCTGATAAGAAACTGGTAGAAATTGTTAGGTAAAACTCATTTATTAG CACCTTTAAA TTGTGTTTTTTT AACAAATCAATACTTTATTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTTCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGAATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCCACCAGTGCCgg ] [-] EMBL BM598172 [ AGGTAAATCTCATTTATTAGCACACCTTAAAATTGTTATTTTTTT AACAAATCAATACTTTATTGTCGATTTATTTCACATCACATGCAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTCCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGTATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAAAACCAGCACGGCTACCAGTGCCACCAACAGCACAGTGATGAAGCTCAGCACGCGCATTTTAAG TTTTATGTCACTTTCTTCCTGCACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAAAGTGTTCCGG ] [-] EMBL BM609160 [ AGGTAAATCTCATTTATTAGCACACCTTAAAATTGTTATTTTTTT AACAAATCAATACTTTATTGTCGATTTATTTCACATCACATGCAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTCCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGTATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAAAACCAGCACGGCTACCAGTGCCACCAACAGCACAGTGATGAAGCTCAGCACGCGCATTTTAAG TTTTATGTCACTTTCTTCCTGCACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAAAGTGTTCgg ] [-] EMBL BM646556 [ AGGTTAAACTCATTTATTAG CACCTTTAAA TTGTGTTTTTTT AACAAATCAATACTTTATTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTTCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGAATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGTCCGGTAGAACCAGCACGGCCACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGGTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTCTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAATGT TTCgg ] [-] EMBL BM577967 [ AGGTAAATCTCATTTATTAGCACACCTTAAAATTGTTATTTTTTT AACAAATCAATACTTTATTGTCGATTTATTTCACATCACATGCAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTCCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGTATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAAAACCAGCACGGCTACCAGTGCCACCAACAGCACAGTGATGAAGCTCAGCACGCGCATTTTAAG TTTTATGTCACTTTCTTCCTGCACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAAAGTcgg ] [-] EMBL BM614535 [ AGGTAAAACTCATTTATTAG CACCTTTAAA TTGTGTTTTTTT AACAAATCAATACTTTATTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTTCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGAATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCCACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGcgg ] [+] EMBL CNS08ZIX [ aaaTTATTAGCACACCTTTAAATTTTTATTTTTTTAAACAAATCAATACTTTATTGTCGATTTATTTCACATCACATGCAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTCCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTC ] [-] EMBL BM598383 [ aTTGTGTTTTTTT AACAAATCAATACTTTATTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTTCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGAATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCCACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGcgg ] [-] EMBL BM650732 [ AACAAATCAATACTTTATTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTTCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGAATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCCACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAATGTGTTCCGG ] [-] EMBL BM601528 [ AACAAATCAATACTTTATTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTTCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGAATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCCACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAATGTGcgg ] [-] EMBL BM646654 [ AACAAATCAATACTTTATTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTTCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGAATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCCACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAATGTGcgg ] [-] EMBL BM579789 [ AACAAATCAATACTTTATTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTTCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGAATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCCACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAATGTcgg ] [-] EMBL BM629567 [ AACAAATCAATACTTTATTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTTCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGAATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCCACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATcgg ] [+] EMBL CNS09FWH [ CTTTATTGTCGATTTATTTCACATCACATGCAGTTGAAGCATTTCTTTACTTTACTTCTTTGTCTTTGTTCTCCATATCCGCTTCGCTATAACAAATACAGTCCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATTTGAATGGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTA GAACTGTCCACCTTGCACCGCAGTTTGCAGCTATTGGCGTAGGTTATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACAAACCCCGTTATAGTTCCTTCTGAAGGCAGTTGTACTGCCCGGTAGAACCAGCACGGCTACCAGTTCCACCAACAGCACATTTATGCAGCCCAGCACACGCATTCTGAGTTTTTATGAAAATTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTCCGATGCGAAAAGTGTTCTAACACTGAATTTTTTCCAGTTCCAGTTGGCCAACAGTTCTCGAGGAATTCCGCAGCCTTAAGACC] [-] EMBL BM641828 [ TTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTTCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGAATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCCACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAcgg ] [-] EMBL BM586930 [ TCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTTCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGAATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCCACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAATGTGcgg ] consensusID : consensus_10138#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 598 fasta sequence [CCCCGCCCGGGCACATGTGGCCTTTTTTTTTTTTTTTTTTTATTTTTTTAAACAAATCAATACTTTATTGTCGATTTATTTCACATCACATGCAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTCCAT-ATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGTATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCTACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAAAGTGTTC-CGGACGCGTGGGCGGACGCGTGGGCGG] [-] EMBL CNS09FWG [CCCCGCCCGGGCACATGTGGCCTTTTTTTTTTTTTTTTTTTATTTTTTTAAACAAATCAATACTTTATTGTCGATTTATTTCACATCACATGCAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTCCATAATGC CTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGTATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCTACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTGAGTTTTTATGACACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAAAGTGTTC t ] [-] EMBL BM623812 [ TATTTTTTT AACAAATCAATACTTTATTGTCGATTTATTTCACATCACATGCAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTCCAT ATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGTATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAAAACCAGCACGGCTACCAGTGCCACCAACAGCACAGTGATGAAGCTCAGCACGCGCATTTTAAG TTTTATGTCACTTTCTTCCTGCACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAAAGTGTTC CGG ] [-] EMBL BM621991 [ TTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTTCAT ATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGAATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCCACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAATGTGTT CGGACGCGTGGGCGGACGCGTGGGCGG] [-] EMBL BM656275 [ TTGTCGATTTATTTCACATCACATGCAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTCCAT ATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGTATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAAAACCAGCACGGCTACCAGTGCCACCAACAGCACAGTGATGAAGCTCAGCACGCGCATTTTAAG TTTTATGTCACTTTCTTCCTGCACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAAAGTGTTC CGG ] [-] EMBL BM595704 [ TATTTCACATCACATGCAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTCCAT ATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGTATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAAAACCAGCACGGCTACCAGTGCCACCAACAGCACAGTGATGAAGCTCAGCACGCGCATTTTAAG TTTTATGTCACTTTCTTCCTGCACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAAAGTGTTC CGG ] [-] EMBL BM617021 [ TCACATCACATACAGTGGAAGCATTCCTTTACTTTACTTCTTTGTCTTGGTTCTTCAT ATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGAATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCCACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAATGTGTTCTCGGACGCGTGGGCGG ] [+] EMBL CNS08WCY [ ACTTTACTTCTTTTTCTTTGTTCTCCAT ATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTA GAACTGTCCACCTTGCACCGC ] [-] EMBL CNS08WCX [ TCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTT ATTTTGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTAACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGTATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCTACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTGAGTTTTTATGACACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATTCCTTTATCttt ] [-] EMBL CNS08ZIW [ CACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGTATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGCACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCTACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCAC ] [-] EMBL BM609670 [ AGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGTATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAAAACCAGCACGGCTACCAGTGCCACCAACAGCACAGTGATGAAGCTCAGCACGCGCATTTTAAG TTTTATGTCACTTTCTTCCTGCACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAAAGTGTTC CGGACGCGTGGGCGGACGCGTGGGCGG] consensusID : consensus_10138#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 551 fasta sequence [ATGTGGCCTTTTTTTTTTTTTTTTTTTGTTAGGTAAATCTCATTTATTAGCACACCTTAAAATTGTTATTTTTTTAACAAATCAATACTTTATTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTCCATAATCGCCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGTATGCAGCTGTTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGAGGTGCTGCCCGGTAGAACCAGCACGGCTACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTAATTGTTTCCAG] [-] EMBL CNS095YM [ATGTGGCCTTTTTTTTTTTTTTTTTTTGTTAGGTAAATCTCATTTATTAGCACACCTTAAAATTGTTATTTTTTTAACAAATCAATACTTTATTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTCCATAATCGCCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGTATGCAGCTGTTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGAGGTGCTGCCCGGTAGAACCAGCACGGCTACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTAATTGTTTCCAG] [+] EMBL CNS095YN [ GCACACCTTAAAATTGTTATTTTTTTAACAAATCAATACTTTATTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTCCAT ATCCGCTTCGCTATCACAAATACAGTCCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTA GAACTGTCCACCTTGCACCGCAGTTTGCAGCTGTTGGCGTAG ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10138#0 TAGTTTTGTAAATCCCAGCAGTAAAGTATGGTTATTTTTGTTGTTGAAAAGGGTTGTCTT 60 consensus_10138#2 ------------------------------------------------------------ consensus_10138#1 ------------------------------------------------------------ consensus_10138#0 GTTTACAGCTACCAAGCGGCCTGTTGATAGCATTGATAAAGCGTATGGCTCATGCACCAA 120 consensus_10138#2 ------------------------------------------------------------ consensus_10138#1 ------------------------------------------------------------ consensus_10138#0 AACACTTCAGCTAGTGGTGTAAATCCAATGAATCACGTTTAAAAAACACACTTAAACCTT 180 consensus_10138#2 ------------------------------------------------------------ consensus_10138#1 ------------------------------------------------------------ consensus_10138#0 AATCGTGTCTGTTGCTAGTGTTTGTAACTATTGTAACATAAATTGGCTGATAAGAAACTG 240 consensus_10138#2 ----------------------------------------ATGTGGCCTTTTTTT--TTT 18 consensus_10138#1 ------------------------------------------------------------ consensus_10138#0 GTAGAAATTGTTAGGTAAAACTCATTTATTAGCACACCTTTAAATTTGTGTTTTTTTAA- 299 consensus_10138#2 TTTTTTTTTGTTAGGTAAATCTCATTTATTAGCACACCTTAAAATTGTTATTTTTTTAA- 77 consensus_10138#1 ----CCCCGCCCGGGCACATGTGGCCTTTTTTTTTTTTTT----TTTTTATTTTTTTAAA 52 ** * * * * ** ** ** * ********* consensus_10138#0 CAAATCAATACTTTATTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTAC 359 consensus_10138#2 CAAATCAATACTTTATTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTAC 137 consensus_10138#1 CAAATCAATACTTTATTGTCGATTTATTTCACATCACATGCAGTTGAAGCATTCCTTTAC 112 *************************************** ******************** consensus_10138#0 TTTACTTCTTTGTCTTTGTTCTTCATATCCGC-TTCGCTATCACAAATACAGTTCCTTAT 418 consensus_10138#2 TTTACTTCTTTGTCTTTGTTCTCCATAATCGCCTTCGCTATCACAAATACAGTTCCTTAT 197 consensus_10138#1 TTTACTTCTTTGTCTTTGTTCTCCATATCCGC-TTCGCTATCACAAATACAGTTCCTTAT 171 ********************** **** *** *************************** consensus_10138#0 GGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCA 478 consensus_10138#2 GGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCA 257 consensus_10138#1 GGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCA 231 ************************************************************ consensus_10138#0 CACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTG 538 consensus_10138#2 CACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTG 317 consensus_10138#1 CACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTG 291 ************************************************************ consensus_10138#0 CACCGCAGAATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAA 598 consensus_10138#2 CACCGCAGTATGCAGCTGTTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAA 377 consensus_10138#1 CACCGCAGTATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAA 351 ******** ******** ****************************************** consensus_10138#0 ATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGT 658 consensus_10138#2 ATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGAGGTGCTGCCCGGT 437 consensus_10138#1 ATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGT 411 ********************************************** *** ********* consensus_10138#0 AGAACCAGCACGGCCACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATT 718 consensus_10138#2 AGAACCAGCACGGCTACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATT 497 consensus_10138#1 AGAACCAGCACGGCTACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATT 471 ************** ********************************************* consensus_10138#0 CTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGG 778 consensus_10138#2 CTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTAATTGTTTCCAG------ 551 consensus_10138#1 CTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGG 531 ****************************************** ** * * consensus_10138#0 CAATGCCTTGATCGGGGCGCGTTCGATGCGAAATGTGTTCCGGCACTGAATTTTTTCCAG 838 consensus_10138#2 ------------------------------------------------------------ consensus_10138#1 CAATGCCTTGATCGGGGCGCGTTCGATGCGAAAAGTGTTCCGGACGCGTGGGCGGACGCG 591 consensus_10138#0 TTCCAGTTGGCCAACAGTTCTCGAGGAATTCCGCAGCCTTAAGACC 884 consensus_10138#2 ---------------------------------------------- consensus_10138#1 TGGGCGG--------------------------------------- 598 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||