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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10159#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 672 fasta sequence
[CCGCCCACGCGTCCGCGGACGCGT-CCGCTAAGTGGTTGAAGACGGATCGCACAAGTTCTAGTACATCAGTTCAAAGATATATTAGAAAAACAGTTACTTCAAGATGAAGATGCTATTAGGAGCAATCGCTTTGACGCTGGTGATTAGTGCATTTGCTGCCCCGCTGGATGACTCCCGAAATGCTGAGATCTTGCGGTACAGCAGCGAAAACATTGGAATTGATGGCTATCGATTCGAGTTCGCCACAAGCGACGGTACAAGCCGAACGGAGGAGGCTGAGCTGCGTAATCCCGGCACGGATAATGAGGCGATCGCCGTACGCGGATCCTACTCCTACACCGGGCCCGACGGGACGGTGTACGTGATCAATTACGTTGCGGACGAGAACGGATTCCAGCCGGAAGGTGCACATATTCCCAAGTAGTTTGGTCATTTAAACTCCAAATAATCCTTATCCAGAAGCCAAATTATAGTTACAAATTCTTTTGTGGGAGAACCTATCGGGTTTTAAGGCATTTTACTGGAAAGCGTCAAGAAAAAGTAATCTCCGTCTTTAGTTTCACGAATTCTTCCCATCCACGATCAGTTTGCTGATGCGATGTTTGATTTAAAAAATAAAAAGCAAAAAAATACCTCCGATGTAGTGGAATACACTGTGCGACTATCAGGCGA]
[+] EMBL BM656969 [CCGCCCACGCGTCCGCCCACGCGT CCG GTGGTTGAAGACGGATCGCACAAGTTCTAGTACATCAGTTCAAAGATATATTAGAAAAACAGTTACTTCAAGATGAAGATGCTATTAGGAGCAATCGCTTTGACGCTGGTGATTAGTGCATTTGCTGCCCCGCTGGATGACTCCCGAAATGCTGAGATCTTGCGGTACAGCAGCGAAAACATTGGAATTGATGGCTATCGATTCGAGTTCGCCACAAGCGACGGTACAAGCCGAACGGAGGAGGCTGAGCTGCGTAATCCCGGCACGGATAATGAGGCGATCGCCGTACGCGGATCCTACTCCTACACCGGGCCCGACGGGACGGTGTACGTGATCAATTACGTTGCGGACGAGAACGGATTCCAGCCGGAAGGTGCACATATTCCCAAGTAGTTTGGTCATTTAAACTCCAAATAATCCTTATCCAGAAGCCAAATTATAGTTACAAATTCTTTTGTGGGAGAACCTATCGGGTTTTAAGGCATTTTACTGGAAAGCGTCAAGAAAAAGTAATCTCCGTCTTTAGTTTCACGAATTCTTCCCATCCACGATCAGTTTGCTGATGCG ]
[+] EMBL BM613558 [ CCGCGGACGCGT GGGCTAAGTGGTTGAAGACGGATCGCACAAGTTCTAGTACATCAGTTCAAAGATATATTAGAAAAACAGTTACTTCAAGATGAAGATGCTATTAGGAGCAATCGCTTTGACGCTGGTGATTAGTGCATTTGCTGCCCCGCTGGATGACTCCCGAAATGCTGAGATCTTGCGGTACAGCAGCGAAAACATTGGAATTGATGGCTATCGATTCGAGTTCGCCACAAGCGACGGTACAAGCCGAACGGAGGAGGCTGAGCTGCGTAATCCCGGCACGGATAATGAGGCGATCGCCGTACGCGGATCCTACTCCTACACCGGGCCCGACGGGACGGTGTACGTGATCAATTACGTTGCGGACGAGAACGGATTCCAGCCGGAAGGTGCACATATTCCCAAGTAGTTTGGTCATTTAAACTCCAAATAATCCTTATCCAGAAGCCAAATTATAGTTACAAATTCTTTTGTGGGAGAACCTATCGGGTTTTAAGGCATTTTACTGGAAAGCGTCAAGAAAAAGTAATCTCCGTCTTTAGTTTCACGAATTCTTCCCATCCACGATCAGTTTGCTGATGCGATGTTTGATTTAAAAAATAAAAAGCAAAAAAATACCTCC ]
[+] EMBL BM653092 [ CCGCGGACGCGTGGGGCTAAGTGGTTGAAGACGGATCGCTCAAGTTGTAGTACATCAGTTCAAAGATATATTAGAAAAACAGTTGCTTCAAGATGAAGATGCTATTAGGAGCAATCGCTTTGACGCTGGTGATTAGTGCATTTGCTGCCCCGCTGGATGACTCCCGAAATGCTGAGATCTTGCGGTACAGCAGCGAAAACATTGGAATTGATGGCTATCGATTCGAGTTCGCCACAAGCGACGGTACAAGCCGAACGGAGGAGGCTGAGCTGCGTAATCCCGGCACGGATAATGAGGCGATTGCCGTACGAGGATCCTACTCATATACCGGGCCCGATGGGACCGTGTACGTGATCAACTACGTTGCGGATGAGAACGGATTCCAACCGGAAGGTGCACATATTCCCAAGTAATTTGGTCATTCAAACTCCAAATCAGCCTTATCCAGAAGCCAAATTATAGTGACAAATTCTTTTGCGGGAGAACCTTTCGGGTTTTAATGCATTTCACTGTAGAGATACAAGAACAAGTCATCACCGTCTTTAGCTTCAAGAATTCTTCCC ]
[+] EMBL BM628885 [ CCGCTAAGTGGTTGAAGACGGATCGCACAAGTTCTAGTACATCAGTTCAAAGATATATTAGAAAAACAGTTACTTCAAGATGAAGATGCTATTAGGAGCAATCGCTTTGACGCTGGTGATTAGTGCATTTGCTGCCCCGCTGGATGACTCCCGAAATGCTGAGATCTTGCGGTACAGCAGCGAAAACATTGGAATTGATGGCTATCGATTCGAGTTCGCCACAAGCGACGGTACAAGCCGAACGGAGGAGGCTGAGCTGCGTAATCCCGGCACGGATAATGAGGCGATCGCCGTACGCGGATCCTACTCCTACACCGGGCCCGACGGGACGGTGTACGTGATCAATTACGTTGCGGACGAGAACGGATTCCAGCCGGAAGGTGCACATATTCCCAAGTAGTTTGGTCATTTAAACTCCAAATAATCCTTATCCAGAAGCCAAATTATAGTTACAAATTCTTTTGTGGGAGAACCTATCGGGTTTTAAGGCATTTTACTGGAAAGCGTCAAGAAAAAGTAATCTCCGTCTTTAGTTTCACGAATTCTTCCCATCCACGATCAGTTTGCTG ]
[+] EMBL BM656503 [ ccgg taGCTAAGTGGTTGAAGACGGATCGCACAAGTTCTAGTACATCAGTTCAAAGATATATTAGAAAAACAGTTACTTCAAGATGAAGATGCTATTAGGAGCAATCGCTTTGACGCTGGTGATTAGTGCATTTGCTGCCCCGCTGGATGACTCCCGAAATGCTGAGATCTTGCGGTACAGCAGCGAAAACATTGGAATTGATGGCTATCGATTCGAGTTCGCCACAAGCGACGGTACAAGCCGAACGGAGGAGGCTGAGCTGCGTAATCCCGGCACGGATAATGAGGCGATCGCCGTACGCGGATCCTACTCCTACACCGGGCCCGACGGGACGGTGTACGTGATCAATTACGTTGCGGACGAGAACGGATTCCAGCCGGAAGGTGCACATATTCCCAAGTAGTTTGGTCATTTAAACTCCAAATAATCCTTATCCAGAAGCCAAATTATAGTTACAAATTCTTTTGTGGGAGAACCTATCGGGTTTTAAGGCATTTTACTGGAAAGCGTCAAGAAAAAGTAATCTCCGTCTTTAGTTTCACGAATTCTTCCCATCCACGATCAGTTTGCTGATGCGATGTTTGATTTAAAAAATAAAAAGCAAAAAAATACCTCC ]
[+] EMBL BM591028 [ ccgAAGTGGTTGAAGACGGATCGCACAAGTTCTAGTACATCAGTTCAAAGATATATTAGAAAAACAGTTACTTCAAGATGAAGATGCTATTAGGAGCAATCGCTTTGACGCTGGTGATTAGTGCATTTGCTGCCCCGCTGGATGACTCCCGAAATGCTGAGATCTTGCGGTACAGCAGCGAAAACATTGGAATTGATGGCTATCGATTCGAGTTCGCCACAAGCGACGGTACAAGCCGAACGGAGGAGGCTGAGCTGCGTAATCCCGGCACGGATAATGAGGCGATCGCCGTACGCGGATCCTACTCCTACACCGGGCCCGACGGGACGGTGTACGTGATCAATTACGTTGCGGACGAGAACGGATTCCAGCCGGAAGGTGCACATATTCCCAAGTAGTTTGGTCATTTAAACTCCAAATAATCCTTATCCAGAAGCCAAATTATAGTTACAAATTCTTTTGTGGG GAACCTATCGGGTTTTAAGGCATTTTACTGGAAAGCGTCAAGAAAAAGTAATCTCCGTCTTTAGTTTCACGAATTCTTCCCATCCACGATCAGTTTGCTGATGCGATGTTTGATTTAAAAAATAAAAAGCAAAAAAATACCTCCGATGTAGTGGAATACACTGTGCGACTATCAGGCGA]
[+] EMBL BM624553 [ ccGGTTGAAGACGGATCGCACAAGTTCTAGTACATCAGTTCAAAGATATATTAGAAAAACAGTTACTTCAAGATGAAGATGCTATTAGGAGCAATCGCTTTGACGCTGGTGATTAGTGCATTTGCTGCCCCGCTGGATGACTCCCGAAATGCTGAGATCTTGCGGTACAGCAGCGAAAACATTGGAATTGATGGCTATCGATTCGAGTTCGCCACAAGCGACGGTACAAGCCGAACGGAGGAGGCTGAGCTGCGTAATCCCGGCACGGATAATGAGGCGATCGCCGTACGCGGATCCTACTCCTACACCGGGCCCGACGGGACGGTGTACGTGATCAATTACGTTGCGGACGAGAACGGATTCCAGCCGGAAGGTGCACATATTCCCAAGTAGTTTGGTCATTTAAACTCCAAATAATCCTTATCCAGAAGCCAAATTATAGTTACAAATTCTTTTGTGGGAGAACCTATCGGGTTTTAAGGCATTTTACTGGAAAGCGTCAAGAAAAAGTAATCTCCGTCTTTAGTTTCACGAATTCTTCCCATCCACGATCAGTTTGCTGATGCGATGTTTGATTTAAAAAAT ]
[+] EMBL BM649358 [ ccGTTGAAGACGGATCGCACAAGTTCTAGTACATCAGTTCAAAGATATATTAGAAAAACAGTTACTTCAAGATGAAGATGCTATTAGGAGCAATCGCTTTGACGCTGGTGATTAGTGCATTTGCTGCCCCGCTGGATGACTCCCGAAATGCTGAGATCTTGCGGTACAGCAGCGAAAACATTGGAATTGATGGCTATCGATTCGAGTTCGCCACAAGCGACGGTACAAGCCGAACGGAGGAGGCTGAGCTGCGTAATCCCGGCACGGATAATGAGGCGATCGCCGTACGCGGATCCTACTCCTACACCGGGCCCGACGGGACGGTGTACGTGATCAATTACGTTGCGGACGAGAACGGATTCCAGCCGGAAGGTGCACATATTCCCAAGTAGTTTGGTCATTTAAACTCCAAATAATCCTTATCCAGAAGCCAAATTATAGTTACAAATTCTTTTGTGGGAGAACCTATCGGGTTTTAAGGCATTTTACTGGAAAGCGTCAAGAAAAAGTAATCTCCGTCTTTAGTTTCACGAATTCTTCCCATCCACGATCAGTTTGCTGATGCGATGTTTGATTTAAAAAATAAAAAGCAAAAAAATACCTCC ]
consensusID : consensus_10159#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 629 fasta sequence
[GAACCGCCCACGCG-CCG--------GTGGTTGAAGACGGATCGCACAAGTTGTAGTACATCAGTTCAAAGATATATTAGAAAAAAAAACAGTTACTTCAAGATGAAGATGCTATTAGGAGCAATCGCTTTGACACTAGTGATTAGTGCATTTGCTGCCCCGCTGGATGACTCCCGAAATGCCGAGATCTTGCGGTACAGCAGCGAAAACATTGGAATTGATGG-CTAT-CGA--TTCG-AGTTCG-CCACAAGCGACGGTACAAGCCGAACGGAGGAGGCTGAGCTGCGTAATCCCGGCACGGATAATGAGGCGATTGCCGTACGAGGATCCTACTCATATACCGGGCCCGATGGGACCGTGTACGTGATCAACTACGTTGCGGATGAGAACGGATTCCAACCGGAAGGTGCACATATTCCCAAGTAGTTTGGTCATTCAAACTCCAAATCAGCCTTATCCAGTAGCCAAATTATAGTGACAAATTCTTTTGCGGGA-G-AACCTTTCGGGTTTTAATGCATTTCACTGTAAA-GAGTCAAGAACAAGTCATCTCCGTCTTTAGTTTCGAG-AATTCCTCCCATCCACGATCAGTTTGCTGATGCGATCATGTTTGATTTAAAAAATAAAAAGCAAAAAATACCTCC]
[+] EMBL AL931673 [GAATCGCC CGAG GTT ATGGTTGAAGACGGATCGCACAAGTTGTAGTACATCAGTTCAAAGATATATTAGAAAAAAAAACAGTTACTTCAAGATGAAGATGCTATTAGGAGCAATCGCTTTGACACTAGTGATTAGTGCATTTGCTGCCCCGCTGGATGACTCCCGAAATGCCGAGATCTTGCGGTACAGCAGCGAAAACATTGGAATTGATGG CTAT CGA TTCG AGTTCG CCACAAGCGACGGTACAAGCCGAACGGAGGAGGCTGAGCTGCGTAATCCCGGCACGGATAATGAGGCGATTGCCGTACGAGGATCCTACTCATATACCGGGCCCGATGGGACCGTGTACGTGATCAACTACGTTGCGGATGAGAACGGATTCCAACCGGAAGGTGCACATATTCCCAAGTAG TTGGTCATTCAAACTCCAAATCAGCCTTATCCAGTAGCCAAATTATAGTGACAAATTCTTTTGCGGGA G AACCTTTCGGGTTTTAATGCATTTCACTGTAAACGAGTCAAGAACAAGTCATCTCCGTCTTTAGTTTCGAGCAATTCCTC ]
[+] EMBL BM629173 [ CCGCCCACGCGTCCG GTGGTTGAAGACGGATCGCACAAGTTGTAGTACATCAGTTCAAAGATATATTAGAAAAAAAAACAGTTACTTCAAGATGAAGATGCTATTAGGAGCAATCGCTTTGACACTAGTGATTAGTGCATTTGCTGCCCCGCTGGATGACTCCCGAAATGCCGAGATCTTGCGGTACAGCAGCGAAAACATTGGAATTGATGG CTAT CGA TTCG AGTTCG CCACAAGCGACGGTACAAGCCGAACGGAGGAGGCTGAGCTGCGTAATCCCGGCACGGATAATGAGGCGATTGCCGTACGAGGATCCTACTCATATACCGGGCCCGATGGGACCGTGTACGTGATCAACTACGTTGCGGATGAGAACGGATTCCAACCGGAAGGTGCACATATTCCCAAGTAGTTTGGTCATTCAAACTCCAAATCAGCCTTATCCAGTAGCCAAATTATAGTGACAAATTCTTTTGCGGGA G AACCTTTCGGGTTTTAATGCATTTCACTGTAAA GAGTCAAGAACAAGTCATCTCCGTCTTTAGTTTCGAG AATTCCTCCCATCCACGATCAGTTTGCTGATGCGATC ]
[+] EMBL BM646168 [ CCGCCCACGCGTCCG GTGGTTGAAGACGGATCGCACAAGTTGTAGTACATCAGTTCAAAGATATATTAGAAAAAAAAACAGTTACTTCAAGATGAAGATGCTATTAGGAGCAATCGCTTTGACACTAGTGATTAGTGCATTTGCTGCCCCGCTGGATGACTCCCGAAATGCCGAGATCTTGCGGTACAGCAGCGAAAACATTGGAATTGATGG CTAT CGA TTCG AGTTCG CCACAAGCGACGGTACAAGCCGAACGGAGGAGGCTGAGCTGCGTAATCCCGGCACGGATAATGAGGCGATTGCCGTACGAGGATCCTACTCATATACCGGGCCCGATGGGACCGTGTACGTGATCAACTACGTTGCGGATGAGAACGGATTCCAACCGGAAGGTGCACATATTCCCAAGTAGTTTGGTCATTCAAACTCCAAATCAGCCTTATCCAGTAGCCAAATTATAGTGACAAATTCTTTTGCGGGA G AACCTTTCGGGTTTTAATGCATTTCACTGTAAA GAGTCAAGAACAAGTCATCTCCGTCTTTAGTTTCGAG AATTCCTCCCATCCACGATCAGTTTGCTGATGCG ]
[+] EMBL BM582829 [ CCGCCCACGCGTCCGGTAGCTAAGTGGTTGAAGACGGATCGCTCAAGTTGTAGTACATCAGTTCAAAGATATATTAG AAAAACAGTTGCTTCAAGATGAAGATGCTATTAGGAGCAATCGCTTTGACGCTGGTGATTAGTGCATTTGCTGCCCCGCTGGATGACTCCCGAAATGCTGAGATCTTGCGGTACAGCAGCGAAAACATTGGAATTGATGG CTAT CGA TTCG AGTTCG CCACAAGCGACGGTACAAGCCGAACGGAGGAGGCTGAGCTGCGTAATCCCGGCACGGATAATGAGGCGATTGCCGTACGAGGATCCTACTCATATACCGGGCCCGATGGGACCGTGTACGTGATCAACTACGTTGCGGATGAGAACGGATTCCAACCGGAAGGTGCACATATTCCCAAGTAATTTGGTCATTCAAACTCCAAATCAGCCTTATCCAGAAGCCAAATTATAGTGACAAATTCTTTTGCGGGA G AACCTTTCGGGTTTTAATGCATTTCACTGTAGA GATACAAGAACAAGTCATCACCGTCTTTAGCTTCAAG AATTCTTCCTATCCACGATCTGTTTGCTGATGCG ]
[+] EMBL BM644055 [ CCG GTGGTTGAAGACGGATCGCACAAGTTGTAGTACATCAGTTCAAAGATATATTAGAAAAAAAAACAGTTACTTCAAGATGAAGATGCTATTAGGAGCAATCGCTTTGACACTAGTGATTAGTGCATTTGCTGCCCCGCTGGATGACTCCCGAAATGCCGAGATCTTGCGGTACAGCAGCGAAAACATTGGAATTGATGG CTAT CGA TTCG AGTTCG CCACAAGCGACGGTACAAGCCGAACGGAGGAGGCTGAGCTGCGTAATCCCGGCACGGATAATGAGGCGATTGCCGTACGAGGATCCTACTCATATACCGGGCCCGATGGGACCGTGTACGTGATCAACTACGTTGCGGATGAGAACGGATTCCAACCGGAAGGTGCACATATTCCCAAGTAGTTTGGTCATTCAAACTCCAAATCAGCCTTATCCAGTAGCCAAATTATAGTGACAAATTCTTTTGCGGGA G AACCTTTCGGGTTTTAATGCATTTCACTGTAAA GAGTCAAGAACAAGTCATCTCCGTCTTTAGTTTCGAG AATTCCTCCCATCCACGATCAGTTTGCTGATGCGATCATGTTTGATTTAAAAAATAAAAAGCAAAAAATACCTCC]
[+] EMBL BM592255 [ CCG GTGGTTGAAGACGGATCGCACAAGTTGTAGTACATCAGTTCAAAGATATATTAGAAAAAAAAACAGTTACTTCAAGATGAAGATGCTATTAGGAGCAATCGCTTTGACACTAGTGATTAGTGCATTTGCTGCCCCGCTGGATGACTCCCGAAATGCCGAGATCTTGCGGTACAGCAGCGAAAACATTGGAATTGATGG CTAT CGA TTCG AGTTCG CCACAAGCGACGGTACAAGCCGAACGGAGGAGGCTGAGCTGCGTAATCCCGGCACGGATAATGAGGCGATTGCCGTACG ]
[+] EMBL BM626588 [ CCG GTGGTTGAAGACGGATCGCACAAGTTGTAGTACATCAGTTCAAAGATATATTAGAAAAAAAAACAGTTACTTCAAGATGAAGATGCTATTAGGAGCAATCGCTTTGACACTAGTGATTAGTGCATTTGCTGCCCCGCTGGATGACTCCCGAAATGCCGAGATCTTGCGGTACAGCAGCGAAAACATTGGAATTGATGG CTAT CGA TTCG AGTTCG CCACAAGCGACGGTACAAGCCGAACGGAGGAGGCTGAGCTGCGTAATCCCGGCACGGATAATGAGGCGATTGCCGTACGAGGATCCTACTCATATACCGGGCCCGATGGGACCGTGTACGTGATCAACTACGTTGCGGATGAGAACGGATTCCAACCGGAAGGTGCACATATTCCCAAGTAGTTTGGTCATTCAAACTCCAAATCAGCCTTATCCAGTAGCCAAATTATAGTGACAAATTCTTTTGCGGGA G AACCTTTCGGGTTTTAATGCATTTCACTGTAAA GAGTCAAGAACAAGTCATCTCCGTCTTTAGTTTCGAG AATTCCTCCCATCCACGATCAGT ]
[+] EMBL BM654948 [ CCG GTGGTTGAAGACGGATCGCACAAGTTGTAGTACATCAGTTCAAAGATATATTAGAAAAAAAAACAGTTACTTCAAGATGAAGATGCTATTAGGAGCAATCGCTTTGACACTAGTGATTAGTGCATTTGCTGCCCCGCTGGATGACTCCCGAAATGCCGAGATCTTGCGGTACAGCAGCGAAAACATTGGAATTGATGGCCTATCCGAATTTCGAAGTTCGCCCACAA ]
[+] EMBL BM657486 [ ccgctaa GTGGTTGAAGACGGATCGCACAAGTTGTAGTACATCAGTTCAAAGATATATTAGAAAAAAAAACAGTTACTTCAAGATGAAGATGCTATTAGGAGCAATCGCTTTGACACTAGTGATTAGTGCATTTGCTGCCCCGCTGGATGACTCCCGAAATGCCGAGATCTTGCGGTACAGCAGCGAAAACATTGGAATTGATGG CTAT CGA TTCG AGTTCG CCACAAGCGACGGTACAAGCCGAACGGAGGAGGCTGAGCTGCGTAATCCCGGCACGGATAATGAGGCGATTGCCGTACGAGGATCCTACTCATATACCGGGCCCGATGGGACCGTGTACGTGATCAACTACGTTGCGGATGAGAACGGATTCCAACCGGAAGGTGCACATATTCCCAAGTAGTTTGGTCATTCAAACTCCAAATCAGCCTTATCCAGTAGCCAAATTATAGTGACAAATTCTTTTGCGGGA G AACCTTTCGGGTTTTAATGCATTTCACTGTAAA GAGTCAAGAACAAGTCATCTCCGTCTTTAGTTTCGAG AATTCCTCCCATCCACGATCAGTTTGCTGATGCGA ]
[+] EMBL BM647878 [ ccgtaa GTGGTTGAAGACGGATCGCTCAAGTTGTAGTACATCAGTTCAAAGATATATTAG AAAAACAGTTGCTTCAAGATGAAGATGCTATTAGGAGCAATCGCTTTGACGCTGGTGATTAGTGCATTTGCTGCCCCGCTGGATGACTCCCGAAATGCTGAGATCTTGCGGTACAGCAGCGAAAACATTGGAATTGATGG CTAT CGA TTCG AGTTCG CCACAAGCGACGGTACAAGCCGAACGGAGGAGGCTGAGCTGCGTAATCCCGGCACGGATAATGAGGCGATTGCCGTACGAGGATCCTACTCATATACCGGGCCCGATGGGACCGTGTACGTGATCAACTACGTTGCGGATGAGAACGGATTCCAACCGGAAGGTGCACATATTCCCAAGTAATTTGGTCATTCAAACTCCAAATCAGCCTTATCCAGAAGCCAAATTATAGTGACAAATTCTTTTGCGGGA G AACCTTTCGGGTTTTAATGCATTTCACTGTAGA GATACAAGAACAAGTCATCACCGTCTTTAGCTTCAAG AATTCTTCCCATCCACGATCTGTTTGCTGATGCGATCATGTTTGATTT ]
[+] EMBL BM587380 [ ccGGTTGAAGACGGATCGCACAAGTTGTAGTACATCAGTTCAAAGATATATTAGAAAAAAAAACAGTTACTTCAAGATGAAGATGCTATTAGGAGCAATCGCTTTGACACTAGTGATTAGTGCATTTGCTGCCCCGCTGGATGACTCCCGAAATGCCGAGATCTTGCGGTACAGCAGCGAAAACATTGGAATTGATGG CTAT CGA TTCG AGTTCG CCACAAGCGACGGTACAAGCCGAACGGAGGAGGCTGAGCTGCGTAATCCCGGCACGGATAATGAGGCGATTGCCGTACGAGGATCCTACTCATATACCGGGCCCGATGGGACCGTGTACGTGATCAACTACGTTGCGGATGAGAACGGATTCCAACCGGAAGGTGCACATATTCCCAAGTAGTTTGGTCATTCAAACTCCAAATCAGCCTTATCCAGTAGCCAAATTATAGTGACAAATTCTTTTGCGGGA G AACCTTTCGGGTTTTAATGCATTTCACTGTAAA GAGTCAAGAACAAGTCATCTCCGTCTTTAGTTTCGAG AATTCCTCCCATCCACGATCAGTTTGCTGATGCGATCATGTTTGATTTAAAAAATAAAAAGCAAAAAATACCTCC]
[+] EMBL BM622110 [ ccgGGTTGAAGACGGATCGCTCAAGTTGTAGTACATCAGTTCAAAGATATATTAG AAAAACAGTTGCTTCAAGATGAAGATGCTATTAGGAGCAATCGCTTTGACGCTGGTGATTAGTGCATTTGCTGCCCCGCTGGATGACTCCCGAAATGCTGAGATCTTGCGGTACAGCAGCGAAAACATTGGAATTGATGG CTAT CGA TTCG AGTTCG CCACAAGCGACGGTACAAGCCGAACGGAGGAGGCTGAGCTGCGTAATCCCGGCACGGATAATGAGGCGATTGCCGTACGAGGATCCTACTCATATACCGGGCCCGATGGGACCGTGTACGTGATCAACTACGTTGCGGATGAGAACGGATTCCAACCGGAAGGTGCACATATTCCCAAGTAATTTGGTCATTCAAACTCCAAATCAGCCTTATCCAGAAGCCAAATTATAGTGACAAATTCTTTTGCGGGA G AACCTTTCGGGTTTTAATGCATTTCACTGTAGA GATACAAGAACAAGTCATCACCGTCTTTAGCTTCAAG AATTCTTCCCATCCACGATCtg ]
[+] EMBL BM646753 [ ccGGTTGAAGACGGATCGCTCAAGTTGTAGTACATCAGTTCAAAGATATATTAG AAAAACAGTTGCTTCAAGATGAAGATGCTATTAGGAGCAATCGCTTTGACGCTGGTGATTAGTGCATTTGCTGCCCCGCTGGATGACTCCCGAAATGCTGAGATCTTGCGGTACAGCAGCGAAAACATTGGAATTGATGG CTAT CGA TTCG AGTTCG CCACAAGCGACGGTACAAGCCGAACGGAGGAGGCTGAGCTGCGTAATCCCGGCACGGATAATGAGGCGATTGCCGTACGAGGATCCTACTCATATACCGGGCCCGATGGGACCGTGTACGTGATCAACTACGTTGCGGATGAGAACGGATTCCAACCGGAAGGTGCACATATTCCCAAGTAATTTGGTCATTCAAACTCCAAATCAGCCTTATCCAGAAGCCAAATTATAGTGACAAATTCTTTTGCGGGA G AACCTTTCGGGTTTTAATGCATTTCACTGTAGA GATACAAGAACAAGTCATCACCGTCTTTAGCTTCAAG AATTCTTCCCATCCACGATCtg ]
[+] EMBL BM641783 [ ccGGTTGAAGACGGATCGCACAAGTTGTAGTACATCAGTTCAAAGATATATTAGAAAAAAAAACAGTTACTTCAAGATGAAGATGCTATTAGGAGCAATCGCTTTGACACTAGTGATTAGTGCATTTGCTGCCCCGCTGGATGACTCCCGAAATGCCGAGATCTTGCGGTACAGCAGCGAAAACATTGGAATTGATGG CTAT CGA TTCG AGTTCG CCACAAGCGACGGTACAAGCCGAACGGAGGAGGCTGAGCTGCGTAATCCCGGCACGGATAATGAGGCGATTGCCGTACGAGGATCCTACTCATATACCGGGCCCGATGGGACCGTGTACGTGATCAACTACGTTGCGGATGAGAACGGATTCCAACCGGAAGGTGCACATATTCCCAAGTAGTTTGGTCATTCAAACTCCAAATCAGCCTTATCCAGTAGCCAAATTATAGTGACAAATTCTTT ]
[+] EMBL BM638665 [ ccGGTTGAAGACGGATCGCACAAGTTGTAGTACATCAGTTCAAAGATATATTAGAAAAAAAAACAGTTACTTCAAGATGAAGATGCTATTAGGAGCAATCGCTTTGACACTAGTGATTAGTGCATTTGCTGCCCCGCTGGATGACTCCCGAAATGCCGAGATCTTGCGGTACAGCAGCGAAAACATTGGAATTGATGG CTAT CGA TTCG AGTTCG CCACAAGCGACGGTACAAGCCGAACGGAGGAGGCTGAGCTGCGTAATCCCGGCACGGATAATGAGGCGATTGCCGTACGAGGATCCTACTCATATACCGGGCCCGATGGGACCGTGTACGTGATCAACTACGTTGCGGATGAGAACGGATTCCAACCGGAAGGTGCACATATTCCCAAGTAGTTTGGTCATTCAAACTCCAAATCAGCCTTATCCAGTAGCCAAATTATAGTGACAAATTCTTTTGCGGGAGG AACCTTTCGGGTTTTAATGCATTTCACTGTAAA GAGTCAAGAACAAGTCATCTCCGTCTTTAGTTTCGAG AATTCCTCCCATCCACGATCAGTTTGCTGATGCGATCATGTTTGATTTAAAAAATAAAAAGCAAAAAATACCTCC]
[+] EMBL BM632860 [ ccGGTTGAAGACGGATCGCTCAAGTTGTAGTACATCAGTTCAAAGATATATTAG AAAAACAGTTGCTTCAAGATGAAGATGCTATTAGGAGCAATCGCTTTGACGCTGGTGATTAGTGCATTTGCTGCCCCGCTGGATGACTCCCGAAATGCTGAGATCTTGCGGTACAGCAGCGAAAACATTGGAATTGATGG CTAT CGA TTCG AGTTCG CCACAAGCGACGGTACAAGCCGAACGGAGGAGGCTGAGCTGCGTAATCCCGGCACGGATAATGAGGCGATTGCCGTACGAGGATCCTACTCATATACCGGGCCCGATGGGACCGTGTACGTGATCAACTACGTTGCGGATGAGAACGGATTCCAACCGGAAGGTGCACATATTCCCAAGTAATTTGGTCATTCAAACTCCAAATCAGCCTTATCCAGAAGCCAAATTATAGTGACAAATTCTTTTGCGGGA G AACCTTTCGGGTTTTAATGCATTTCACTGTAGA GATACAAGAACAAGTCATCACCGTCTTTAGCTTCAAG AATTCTTCCCATCCACGATCTGTTTGCTGATGCGATCATGTTTGATTTAAAAAATAAAAAGC ]
[+] EMBL BM591224 [ ccgGACGGATCGCTCAAGTTGTAGTACATCAGTTCAAAGATATATTAG AAAAACAGTTGCTTCAAGATGAAGATGCTATTAGGAGCAATCGCTTTGACGCTGGTGATTAGTGCATTTGCTGCCCCGCTGGATGACTCCCGAAATGCTGAGATCTTGCGGTACAGCAGCGAAAACATTGGAATTGATGG CTAT CGA TTCG AGTTCG CCACAAGCGACGGTACAAGCCGAACGGAGGAGGCTGAGCTGCGTAATCCCGGCACGGATAATGAGGCGATTGCCGTACGAGGATCCTACTCATATACCGGGCCCGATGGGACCGTGTACGTGATCAACTACGTTGCGGATGAGAACGGATTCCAACCGGAAGGTGCACATATTCCCAAGTAATTTGGTCATTCAAACTCCAAATCAGCCTTATCCAGAAGCCAAATTATAGTGACAAATTCTTTTGCGGGA GAAACCTTTCGGGTTTTAATGCATTTCACTGTAGA GATACAAGAACAAGTCATCACCGTCTTTAGCTTCAAG AATTCTTCCCATCCACGATCTGTTTGCTGATGCGATC ]
[+] EMBL BM624333 [ CGGATCGCACAAGTTGTAGTACATCAGTTCAAAGATATATTAGAAAAAAAAACAGTTACTTCAAGATGAAGATGCTATTAGGAGCAATCGCTTTGACACTAGTGATTAGTGCATTTGCTGCCCCGCTGGATGACTCCCGAAATGCCGAGATCTTGCGGTACAGCAGCGAAAACATTGGAATTGATGG CTAT CGA TTCG AGTTCG CCACAAGCGACGGTACAAGCCGAACGGAGGAGGCTGAGCTGCGTAATCCCGGCACGGATAATGAGGCGATTGCCGTACGAGGATCCTACTCATATACCGGGCCCGATGGGACCGTGTACGTGATCAACTACGTTGCGGATGAGAACGGATTCCAACCGGAAGGTGCACATATTCCCAAGTAGTTTGGTCATTCAAACTCCAAATCAGCCTTATCCAGTAGCCAAATTATAGTGACAAATTCTTTTGCGGGA G AACCTTTCGGGTTTTAATGCATTTCACTGTAAA GAGTCAAGAACAAGTCATCTCCGTCTTTAGTTTCGAG AATTCCTCCCATCCACGATCAGTTTGCTGATGCGATCATGTT ]
[+] EMBL BX609106 [ AAAGATATATTAGAAAAAAAAACAGTTACTTCAAGATGAAGATGCTATTAGGAGCAATCGCTTTGACACTAGTGATTAGTGCATTTGCTGCCCCGCTGGATGACTCCCGAAATGCCGAGATCTTGCGGTACAGCAGCGAAAACATTGGAATTGATGG CTAT CGA TTCG AGTTCG CCACAAGCGACGGTACAAGCCGAACGGAGGAGGCTGAGCTGCGTAATCCCGGCACGGATAATGAGGCGATTGCCGTACGAGGATCCTACTCATATACCGGGCCCGATGGGACCGTGTACGTGATCAACTACGTTGCGGATGAGAACGGATTCCAACCGGAAGGTGCACATATTCCCAAGTAGTTTGGTCATTCAAACTCCAAATCAGCCTTATCCAGTAGCCAAATTATAGTGACAAATTCTTTTGCGGGA G AACCTTTCGGGTTTTAATGCATTTCACTGTAAA GAGTCAAGAACAAGTCATCTCCGTCTTTAGTTTCGAG AATTCCTCCCATCCACGATCAGTTTGCTGATGCGATCATGTTTGATTTAAAAAATAAAAAGCAAA ]
[+] EMBL BM623060 [ c cgAT CGA TTCG AGTTCG CCACAAGCGACGGTACAAGCCGAACGGAGGAGGCTGAGCTGCGTAATCCCGGCACGGATAATGAGGCGATTGCCGTACGAGGATCCTACTCATATACCGGGCCCGATGGGACCGTGTACGTGATCAACTACGTTGCGGATGAGAACGGATTCCAACCGGAAGGTGCACATATTCCCAAGTAATTTGGTCATTCAAACTCCAAATCAGCCTTATCCAGAAGCCAAATTATAGTGACAAATTCTTTTGCGGGA G AACCTTTCGGGTTTTAATGCATTTCACTGTAGA GATACAAGAACAAGTCATCACCGTCTTTAGCTTCAAG AATTCTTCCCATCCACGATCTGTTTGCTGATGCGATCATGTTTG ]
consensusID : consensus_10159#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 196 fasta sequence
[CAAGTTGTAGTACATCAGTTCAAAGATATATTACAAAAAAAAACAGTTACTTCAAGATGAAGATGGTACACAATATTCTTTCCATCAGTTCCCAATCAACTTTGAATTAACGTCCAAAACTTCTGTGTGTTTATAGCTATTAGGAGCAATCGCTTTGACACTAGTGATTAGTGCATTTGCTGCCCCGCTGGATGAC]
[+] EMBL BM649072 [CAAGTTGTAGTACATCAGTTCAAAGATATATTACAAAAAAAAACAGTTACTTCAAGATGAAGATGGTACACAATATTCTTTCCATCAGTTCCCAATCAACTTTGAATTAACGTCCAAAACTTCTGTGTGTTTATAGCTATTAGGAGCAATCGCTTTGACACTAGTGATTAGTGCATTTGCTGCCCCGCTGGATGAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10159#0 CCGCCCACGCGTCCGCGGACGCGTCCGCTAAGTGGTTGAAGACGGATCGCACAAGTTCTA 60
consensus_10159#1 ---------GAACCGCCCACGCGCC-----GGTGGTTGAAGACGGATCGCACAAGTTGTA 46
consensus_10159#2 ---------------------------------------------------CAAGTTGTA 9
****** **
consensus_10159#0 GTACATCAGTTCAAAGATATATTAGAAAAA----CAGTTACTTCAAGATGAAGATGCTAT 116
consensus_10159#1 GTACATCAGTTCAAAGATATATTAGAAAAAAAAACAGTTACTTCAAGATGAAGATGCTAT 106
consensus_10159#2 GTACATCAGTTCAAAGATATATTACAAAAAAAAACAGTTACTTCAAGATGAAGATGGTAC 69
************************ ***** ********************** **
consensus_10159#0 TAGGAGCAATCGCTTTGACGCTGGTGATTAGTGCATTTGCTGCCCCGCTGGATGACTCCC 176
consensus_10159#1 TAGGAGCAATCGCTTTGACACTAGTGATTAGTGCATTTGCTGCCCCGCTGGATGACTCCC 166
consensus_10159#2 -----ACAATATTCTTTCCATCAGTTCCCAATCAACTT------TGAATTAACG--TCCA 116
**** ** * ** * * * ** * * * ***
consensus_10159#0 GAAATGCTGAGATCTTGCGGTA--CAGCAGCGAAAACATTGGAATTGATGGCTATCGATT 234
consensus_10159#1 GAAATGCCGAGATCTTGCGGTA--CAGCAGCGAAAACATTGGAATTGATGGCTATCGATT 224
consensus_10159#2 AAACTTCTGTGTGTTTATAGCTATTAGGAGCAATCGCTTTGACACTAGTGATTAGTGCAT 176
** * * * * ** * ** *** * * *** * * ** ** * *
consensus_10159#0 CGAGTTCGCCACAAG-CGACGGTACAAGCCGAACGGAGGAGGCTGAGCTGCGTAATCCCG 293
consensus_10159#1 CGAGTTCGCCACAAG-CGACGGTACAAGCCGAACGGAGGAGGCTGAGCTGCGTAATCCCG 283
consensus_10159#2 TTGCTGCCCCGCTGGATGAC---------------------------------------- 196
* * ** * * ***
consensus_10159#0 GCACGGATAATGAGGCGATCGCCGTACGCGGATCCTACTCCTACACCGGGCCCGACGGGA 353
consensus_10159#1 GCACGGATAATGAGGCGATTGCCGTACGAGGATCCTACTCATATACCGGGCCCGATGGGA 343
consensus_10159#2 ------------------------------------------------------------
consensus_10159#0 CGGTGTACGTGATCAATTACGTTGCGGACGAGAACGGATTCCAGCCGGAAGGTGCACATA 413
consensus_10159#1 CCGTGTACGTGATCAACTACGTTGCGGATGAGAACGGATTCCAACCGGAAGGTGCACATA 403
consensus_10159#2 ------------------------------------------------------------
consensus_10159#0 TTCCCAAGTAGTTTGGTCATTTAAACTCCAAATAATCCTTATCCAGAAGCCAAATTATAG 473
consensus_10159#1 TTCCCAAGTAGTTTGGTCATTCAAACTCCAAATCAGCCTTATCCAGTAGCCAAATTATAG 463
consensus_10159#2 ------------------------------------------------------------
consensus_10159#0 TTACAAATTCTTTTGTGGGAGAACCTATCGGGTTTTAAGGCATTTTACTGGAAAGCGTCA 533
consensus_10159#1 TGACAAATTCTTTTGCGGGAGAACCTTTCGGGTTTTAATGCATTTCACTGTAAAGAGTCA 523
consensus_10159#2 ------------------------------------------------------------
consensus_10159#0 AGAAAAAGTAATCTCCGTCTTTAGTTTCACGAATTCTTCCCATCCACGATCAGTTTGCTG 593
consensus_10159#1 AGAACAAGTCATCTCCGTCTTTAGTTTCGAGAATTCCTCCCATCCACGATCAGTTTGCTG 583
consensus_10159#2 ------------------------------------------------------------
consensus_10159#0 ATGCGAT---GTTTGATTTAAAAAATAAAAAGCAAAAAAATACCTCCGATGTAGTGGAAT 650
consensus_10159#1 ATGCGATCATGTTTGATTTAAAAAATAAAAAGCAAAAAA-TACCTCC------------- 629
consensus_10159#2 ------------------------------------------------------------
consensus_10159#0 ACACTGTGCGACTATCAGGCGA 672
consensus_10159#1 ----------------------
consensus_10159#2 ----------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||