These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10173#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 26 consensus length = 1194 fasta sequence [CCAAGAATCGCCCACG----G-GTC--GATTGAACG-GTGCGAACGCGCGCGCTC--GTG--GTCCAAGTGCGCACAAACAAACTTTACCAGACACGGGCACACACATACAGACAGATGCGATCATGTCGCTCACGGTGGAGCTGTTCGATCTTCCGGCACACCAGTTCCGGGTGTTTTGGGGC-GCCTCCGG-CAGCATGTG-GCAGTCGC-TGTGGGACCGTTTCCTCGACTTCACCGGTGATAACCCGCTCGCCCTTTGGACCGTCGGGTCGTACGTGTACACCTCGCTGGTCTACTGGAGCATCGGGCTGGCCTACACGCTGCTGGACGTGACC-GGGC-GGCC-GGCGGCCCTGCGCCGGTACAAGGTGCAGCCC-GGCACGAACGAACCGGTCGA--CCCAG-CCC-GGCTGCGCACCG-TCATCCGGCAGGTGCTGTTCAA-CCAGTTCTGCACCGGGCTGCC-G-CTGCTCTTCC-T-CATGTACTACCTGCTGCC-GGGGCAGACGC-GC-GACA-CGA-TCC-GCCAGCTG-CCC-A-CC-TTCGTGACGGTCGT-CTGGCAGCTCGGCGTGTGC-ATCCT-GATCG-AGGAGGTGATGTTCTACTACAG-CCACCGGTTGCTGCACGACGGCCG-C-ATCTACC-GG-TACATCCA-CAAGCGGCACCACGAGT-GGACGGCCCCGATCGC-GATCACCGCGATGTACGCGCACCC-GGTCG-AG-AAC-GTGC-TCA-GC-AATCT-GCTG-CCGA-TTG-CGGTCGGCGTGTGG-ACG-ACCGGG--TGCC-ACATC--TCGGT---CGCGTGGCTGTGGTTCACGCT-C-GCCATCT-CG-AACACGCT---GCACG-TGCACTCCGGCTACCATTTGCCGCTGCTGCCCAG-CCCGGAGCAGCACGATTTCCATCATCTGAAGTTCAACCAATGCTACGGCGTGCTCGGTGTGCTGGACTGGCTGCACGGCACGAGCGAAATGTTTCACCGGTCGAAGCAGGCGAAGCGGGACTACATCATGACCAGCCTGGAGCCGGTGCGAGAAACCCATCCCGATCAGTAGCTCCTGTAACGCACCGAGGGTGTCCAGAGGGGAAATCGTCTTCCAAGGACCATTCAATATGTTGATGGCGATGTTATTATGTTAGAGCAGCCGCTATATGACTAAGCTTGGCTGGTATCAAGCCCAGCGAAAAGCCTGTTTTGAACCAATGGAACAGGAGCAAAGCAATTACAATGAGAGTACATATCTATATATAT] [+] EMBL BX467488 [CCAAGAATCGCGCACGAGGCGAGTC GATTGAACG GTGCGAACACGCGCGCTC GTG GTCCAAGTGCGCACAAACAAACTTTACCAGACACGGGCACACACATACAGACAGATGCGATCATGTCGCTCACGGTGGAGCTGTTCGATCTTCCGGCACACCAGTTCCGGGTGTTTTGGGGC GCCTCCGG CAGCATGTG GCAGTCGC TGTGGGACCGTTTCCTCGACTTCACCGGTGATAACCCGCTCGCCCTTTGGACCGTCGGGTCGTACGTGTACACCTCGCTGGTCTACTGGAGCATCGGGCTGGCCTACACGCTGCTGGACGTGACC GGGC GGCC GGCGGCCCTGCGCCGGTACAAGGTGCAGCCC GGCACGAACGAACCGGTCGA CCCAG CCC GGCTGCGCACCG TCATCCGGCAGGTGCTGTTCAA CCAGTTCTGCACCGGGCTGCC G CTGCTCTTCC T CATGTACTACCTGCTGCC GGGGCAGACGC GC GACA CGA TCC GCCAGCTG CCCGA CC TTCGTGACGGTCGT CTGGCAGCTCGGCGTGTGC ATCCT GATCG AGGAGGTGATGTTCTACTACAG CACCGGTTGCTGCACGACGGCCG CNATCTACC GG TACATCCAGCAAGCGGNACCACGAGTGGGACGGNCCCGATCGCGGATCACCGCGATGTACGCGCACCC GGTCGAAGAAACGGTGCGTCAGGCNAATCTGGCTGNCGGATTTGCCGGTCNGGGTGTGGAACGAACCGGGGTTGCCAACATCTNTCGGTCCNCACGTGGCTGTGGGTCACGCTNCGGCCATCTCCGAAACACGNTTGCGCACGTTGCACTC ] [+] EMBL AL931412 [ CAAGAATTGCCC CGA G GNT GATTGAACG GTGCGAACGCGCGCGCGC GTGTTGTCCAAGTGCGCACAAACAAACTTTACCAGACACGGGCACACACATACAGACAGATGCGATCATGTCGCTCACGGTGGAGCTGTTCGATCTTCCGGCACACCAGTTCCGGGTGTTTTGGGGC GCCTCCGG CAGCATGTGTGCAGTCGC TGTGGGACCGTTTCCTCGACTTCACCGGTGATAACCCGCTCGCCCTTTGGACCGTCGGGTCGTACGTGTACACCTCGCTGGTCTACTGGAGCATCGGGCT GCCTACACGCTGCTGGACGTGACCTGGGCTGGCCTGGCGGCCCTGCGCCGGTACAAGGTGCAGCCCTGGCACGAACGAACCGGTCGA CCCAG CCCTGGCTGCGCACCG TCATCCGGCAGGTGCTGTTCAA CCAGTTCTGCACCGGGCTGCCTG CTGCTCTTCC T CATGTACTACCTGCTGCCTGGGGCAGACGC GCTGACA CGA TCCTGCCAGCTG CCC A CC TTCGTGACGGTCGT CTGGCAGCTCGCCGTGTGC ATCCT GATCG AGGAGGTGATGTTCTACTACAG CACCGGTTGCTGCACGACGGCCG C ATCTACC GG TACATCCA CAAGCGGCACC ] [+] EMBL BX468271 [ gcAGAATTCCGCACG A NT GTTANAACG GTGCGAACACGCGCGCTC GTG GTCCAAGTGCGCACAAACAAACTTTACCAGACACGGGCACACACATACAGACAGATGCGATCATGTCGCTCACGGTGGAGCTGTTCGATCTTCCGGCACACCAGTTCCGGGTGTTTTGGGGC GCCTCCGG CAGCATGTG GCAGTCGC TGTGGGACCGTTTCCTCGACTTCACCGGTGATAACCCGCTCGCCCTTTGGACCGTCGGGTCGTACGTGTACACCTCGCTGGTCTACTGGAGCATCGGGCTGGCCTACACGCTGCTGGACGTGACC GGGCAGGCC GGCGGGCCTGCGCCGGTACAAGGTGCAGGCC GGCACGAACGAACCGGTCGAGNACCAGNCCC GGCTGCGCACCG TCATCCGGCAGGTGCTGTTCAAGCCAGTTCTGCACCGGGCTGNC G NTGCTCTTCCGT CATGTACTANCTGCTGCC GGGGCAGACGCTGC GACA CGAGTCC GCCAGCTGNNCC A CCGTTCGTGACGGTCGTACTGGCAGCTCGGCGTGTGCGATCCT GATCG AGGAGGTGATGTTCTACTACAGANCACCGGTTGCTGCACGACGGCCGNG ATCTACCTGGTTACATCCA CAAGC ] [+] EMBL AL695778 [ ATTGCCCA G G C TTNTGAACG GTGCGAACACGCGCGCTC GTG GTCCAAGTGTGCACAAACAAACTTTACCAGACACGGGCACACACATACAGACAGATGCGATCATGTCGCTCACGGTGGAGCTGTTCGATCTTCCGGCACACCAGTTCCGGGTGTTTTGGGGCTGCCTCCGG CAGCATGTG GCAGTCGC TGTGGGACCGTTTCCTCGACTTCACCGGTGATAACCCGCTCGCCCTTTGGACCGTCGGGTCGTACGTGTACACCTCGCTGGTCTACTGGAGCATCGGGCTGGCCTACACGCTGCTGGACGTGACC GGGC GGCC GGCGGCCCTGCGCCGGTACAAGGTGCAGCCC GGCACGAACGAACCGGTCGA CCCAG CCC GGCTGCGCACCG TCATCCGGCAGGTGCTGTTCAA CCAGTTCTGCACCGGGCTGCC G CTGCTCTTCC T CATGTACTACCTGCTGCC GGGGCAGACGC GC GACA CGA TCC GCCAGCTG CCC A CC T ] [+] EMBL AL934670 [ ATCGCCC CGA G GTN TNNTGAACG GTGCGAACACGCGCGCTC GTG GTCCAAGTGCGCACAAACAAACTTTACCAGACACGGGCACACACATACAGACAGATGCGATCATGTCGCTCACGGTGGAGCTGTTCGATCTTCCGGCACACCAGTTCCGGGTGTTTTGGGGC GCCTCCGG CAGCATGTG GCAGTCGC TGTGGGACCGTTTCCTCGACTTCACCGGTGATAACCCGCTCGCCCTTTGGACCGTCGGGTCGTACGTGTACACCTCGCTGGTCTACTGGAGCATCGGGCTGGCCTACACGCTGCTGGACGTGACC GGGC GG C GGCGGCCCTGCGCCGGTACAAGGTGCAGCCC GGCACGAACGAACCGGTCGA CCCAG CCC GGCTGCGCAC ] [+] EMBL BM623169 [ cCGCCCACG C GTCCGGATTGAACG GTGCGAACGCGCGCGCGT GTG GTCCAAGTGCGCACAAACAAACTTTACCAGACACGGGCACACACATACAGACAGATGCGATCATGTCGCTCACGGTGGAGCTGTTCGATCTTCCGGCACACCAGTTCCGGGTGTTTTGGGGC GCCTCCGG CAGCATGTG GCAGTCGC TGTGGGACCGTTTCCTCGACTTCACCGGTGATAACCCGCTCGCCCTTTGGACCGTCGGGTCGTACGTGTACACCTCGCTGGTCTACTGGAGCATCGGGCTGGCCTACACGCTGCTGGACGTGACC GGGC GGCC GGCGGCCCTGCGCCGGTACAAGGTGCAGCCC GGCACGAACGAACCGGTCGA CCCAG CCC GGCTGCGC ] [+] EMBL BM577410 [ cCGCCCACG C GTC CGGAAC GCG CGCGCGCG T GTG GTCCAAGTGCGCACAAACAAACTTTACCAGACACGGGCACACACATACAGACAGATGCGATCATGTCGCTCACGGTGGAGCTGTTCGATCTTCCGGCACACCAGTTCCGGGTGTTTTGGGGC GCCTCCGG CAGCATGTG GCAGTCGC TGTGGGACCGTTTCCTCGACTTCACCGGTGATAACCCGCTCGCCCTTTGGACCGTCGGGTCGTACGTGTACACCTCGCTGGTCTACTGGAGCATCGGGCTGGCCTACACGCTGCTGGACGTGACC GGGC GGCC GGCGGCCCTGCGCCGGTACAAGGTGCAGCCC GGCACGAACGAACCGGTCGA CCCAG CCC GGCTGCGCACCG TCATCCGGCAGGTGCTGTTCAA CCAGTTCTGCACCGGGCTGCC G CTGCTCTTCC T CATGTACTACCTGCTGCC GGGGCAGACGC GC GACA CGA TCC GCCAGCTG CCC A CC TTCGTGACGGTCGT CTGGCAGCTCGCCGTGTGC ATCCT GATCG AGGAGGTGATGTTCTACTACAG CCACCGGTTGCTGCACGACGGCCG C ATCTACC GG TACATCCA CAAGCGGCACCACGAGT GGACGGCCCCGATCGC GATCACCGCGATGTACGCGCACCCGGGTCG AG AAC GTGC TCA GC AATCT GC ] [+] EMBL BM603142 [ ccggCG A GTC GATTGAACG GTGCGAACGCGCGCGCGT GTG GTCCAAGTGCGCACAAACAAACTTTACCAGACACGGGCACACACATACAGACAGATGCGATCATGTCGCTCACGGTGGAGCTGTTCGATCTTCCGGCACACCAGTTCCGGGTGTTTTGGGGC GCCTCCGG CAGCATGTG GCAGTCGC TGTGGGACCGTTTCCTCGACTTCACCGGTGATAACCCGCTCGCCCTTTGGACCGTCGGGTCGTACGTGTACACCTCGCTGGTCTACTGGAGCATCGGGCTGGCCTACACGCTGCTGGACGTGACC GGGC GGCC GGCGGCCCTGCGCCGGTACAAGGTGCAGCCC GGCACGAACGAACCGGTCGA CCCAG CCC GGCTGCGCACCG TCATCCGGCAGGTGCTGTTCAA CCAGTTCTGCACCGGGCT ] [+] EMBL BM639833 [ cc G GTC GATTGAACG GTGCGAACGCGCGCGCGCGTGTG GTCCAAGTGCGCACAAACAAACTTTACCAGACACGGGCACACACATACAGACAGATGCGATCATGTCGCTCACGGTGGAGCTGTTCGATCTTCCGGCACACCAGTTCCGGGTGTTTTGGGGC GCCTCCGG CAGCATGTG GCAGTCGC TGTGGGACCGTTTCCTCGACTTCACCGGTGATAACCCGCTCGCCCTTTGGACCGTCGGGTCGTACGTGT ] [+] EMBL BM588004 [ cc G GTC GATTGAACG GTGCGAACGCGCGCGCGT GTG GTCCAAGTGCGCACAAACAAACTTTACCAGACACGGGCACACACATACAGACAGATGCGATCATGTCGCTCACGGTGGAGCTGTTCGATCTTCCGGCACACCAGTTCCGGGTGTTTTGGGGC GCCTCCGG CAGCATGTG GCAGTCGC TGTGGGACCGTTTCCTCGACTTCACCGGTGATAACCCGCTCGCCCTTTGGACCGTCGGGTCGTACGTGTACACCTCGCTGGTCTACTGGAGCATCGGGCTGGCCTACACGCTGCTGGACGTGACC GGGC GGCC GGCGGCCCTGCGCCGGTACAAGGTGCAGCCC GGCACGAACGAACCGGTCGA CCCAG CCC GGCTGCGCACCG TCATCCGGCAGGTGCTGTTCAA CCAGTTCTGCACCGGGCTGCC G CTGCTCTTCC T CATGTACTACCTGCTGCC GGGGCAGACGC GC GACA CGA TCC GCCAGCTG CCC A CC TTCGTGACGGTCGT CTGGCAGCTCGCCGTGTGC ATCCT GATCG AGGAGGTGATGTTCTACTACAG CCACCGGTTGC ] [+] EMBL BM588894 [ ccg GATTGAACG GTGCGAACGCGCGCGCGCGTGTG GTCCAAGTGCGCACAAACAAACTTTACCAGACACGGGCACACACATACAGACAGATGCGATCATGTCGCTCACGGTGGAGCTGTTCGATCTTCCGGCACACCAGTTCCGGGTGTTTTGGGGC GCCTCCGG CAGCATGTG GCAGTCGC TGTGGGACCGTTTCCTCGACTTCACCGGTGATAACCCGCTCGCCCTTTGGACCGTCGGGTCGTACGTGTACACCTCGCTGGTCTACTGGAGCATCGGGCTGGCCTACACGCTGCTGGACGTGACC GGGC GGCC GGCGGCCCTGCGCCGGTACAAGGTGCAGCCC GGCACGAACGAACCGGTCGA CCCAG CCC GGCTGCGCACCG TCATCCGGCAGGTGCTGTTCAA CCAGTTCTGCACCGGGCTGCC G CTGCTCTTCC T CATGTACTACCTGCTGCC GGGGCAGACGC GC GACA CGA TCC GCCAGCTG CCC A CC TTCGTGACGGTCGT CTGGCAGCTCGCCGTGTGC ATCCT GATCG AGGAGGTGATGTTCTACTACAG CCAC ] [+] EMBL BM622665 [ ACG GTGCGAACGCGCGCGCGCGTGTG GTCCAAGTGCGCACAAACAAACTTTACCACACACGGGCACACACATACAGACAGATGCGATCATGTCGCTCACGGTGGAGCTGTTCGATCTTCCGGCACACCAGTTCCGGGTGTTTTGGGGC GCCTCCGG CAGCATGTG GCAGTCTC TGTGGGACCGTTTCCTCGACTTCACCGGTGA ] [+] EMBL BM653268 [ ccgcggACGCGTGGG CGCGCGCGCGT GTG GTCCAAGTGCGCACAAACAAACTTTACCAGACACGGGCACACACATACAGACAGATGCGATCATGTCGCTCACGGTGGAGCTGTTCGATCTTCCGGCACACCAGTTCCGGGTGTTTTGGGGC GCCTCCGG CAGCATGTG GCAGTCGC TGTGGGACCGTTTCCTCGACTTCACCGGTGATAACCCGCTCGCCCTTTGGACCGTCGGGTCGTACGTGTACACCTCGCTGGTCTACTGGAGCATCGGGCTGGCCTACACGCTGCTGGACGTGACC GGGC GGCC GGCGGCCCTGCGCCGGTACAAGGTGCAGCCC GGCACGAACGAACCGGTCGA CCCAG CCC GGCTGCGCACCG TCATCCGGCAGGTGCTGTTCAA CCAGTTCTGCACCGGGCTGCC G CTGCTCTTCC T CATGTACTACCTGCTGCC GGGGCAGACGC GC GACA CGA TCC GCCAGCTG CCC ACCC TTCGTGACGGTCGT CTGGCAGCTCGCCGTGTGC ATCCTGGATCGAAGGAGGTGATGTTCTACTACAG CCACCGGTTGCTGCACGACGGCCG C ATCTACC GG TACATCCA CAAGCGGCACCACGAG ] [+] EMBL BX628854 [ GCGAACACGCGCGCTC GTG GTCCAAGTGCGCACAAACAAACTTTACCAGACACGGGCACACACATACAGACAGATGCGATCATGTCGCTCACGGTGGAGCTGTTCGATCTTCCGGCACACCAGTTCCGGGNGNTTTGGGGC GCCTCCGG CAGCATGTG GCAGTCGC TGTGGGACCGTTTCCTCGACTTCACCGGTGATAACCCGCTCGCCCTTTGGACCGTCGGGTCGTACGTGTACACCTCGCTGGTCTACTGGAGCATCGGGCTGGCCTACACGCTGCTGGACGTGACC GGGC GGCC GGCGGCCCTGCGCCGGTACAAGGTGCAGCCC GGCACGAACGAANCGGTCGA CCCAG CCC GGCTGCGCACCG TCATCCGGCAGGTGCTGTTCAA CCAGTTCTGCACCGGGCTGCC G CTGCTCTTCC T CATGTACTACCTGCTGCC GGGGCAGACGC GC GACA CGA TCC GCCAGCTG CCC A CC TTCGTGACGGTCGT CTGGCAGCTCGGCGTGTGC ATCCT GATCG AGGAGGTGATGTTCTACTACAG CCACCGGTTGCTGCACGACGGCCG C ATCTACC GG TACATCCA CAAGCGGCACCACGAGT GGACGGCCCCGATCGC GATCACCGCGATGTACGCGCACCC GGTCG AG AAC GTGC TCA NC AATC ] [+] EMBL BX619639 [ CGCGCGCTC GTG GTCCAAGTGCGCACAAACAAACTTTACCAGACGCGGGCACACACATACAGACAGATGCGATCATGTCGCTCACGGTGGAGCTGTTCGATCTTCCGGCACACCAGTTCCGGGTGTTTTGGGGC GCCTCCGG CAGCATGTG GCAGTCGC TGTGGGACCGTTTCCTCGACTTCACCGGTGATAACCCGCTCGCCCTTTGGACCGTCGGGTCGTACGTGTACACCTCGCTGGTCTACTGGAGCATCGGGCTGGCCTACACGCTGCTGGACGTGACC GGGC GGCC GGCGGCCCTGCGCCGGTACAAGGTGCAGCCC GGCACGAACGAACCGGTCGA CCCAG CCC GGCTGCGCACCGNTCATCCGGCAGGTGCTGTTCAACCCAGTTCTGCACCGGGCTGCC GCCTGCTCTTCC TCCATGTACTACCTGCTGCC GGGGCAGACGC GC GACACCGA TCC GCCAGCTG CCCNN CCTTTCGTGACGGTC ] [+] EMBL BX621917 [ CGCGCTC GTG GTCCAAGTGCGCACAAACAAACTTTACCAGACACGGGCACACACATACAGACAGATGCGATCATGTCGCTCACGGTGGAGCTGTTCGATCTTCCGGCACACCAGTTCCGGGTGTTTTGGGGC GCCTCCGG CAGCATGTG GCAGTCGCTTGTGGGACCGTTTCCTCGACTTCACCGGTGATAACCCGCTCGCCCTTTGGACCGTCGGGTCGTACGTGTACACCTCGCTGGTCTACTGGAGCATCGGGCTGGCCTACACGCTGCTGGACGTGACC GGGC GGCC GGCGGCCCTGCGCCGGTACAAGGTGCAGCCC GGCACGAACGAACCGGTCGA CCCAG CCC GGCTGCGCACCG TCATCCGGCAGGTGCTGTTCAA CCAGTTCTGCACCGGGCTGCC G CTGCTCTTCC T CATGTACTACCTGCTGCC GGGGCAGACGC GC GACA CGA TCC GCCAGCTG CCC A CC TTCGTGACGGTCGT CTGGCAGCTCGGCGTGTGC ATCCT GATCG AGGAGGTGATGTTCTACTACAG CCACCGGTTGCTGCACGACGGCCG C ATCTACC GG TACATCCA CAAGCGGCACCACGAGT GGACGGCCCCGATCGC GATCACCGCGATGTACGCGCACCC GGTCG AG AAC GTGC TCA GC AATCT GCTG CCGA TTG CGGTCGGCGTGTGG ACG ACCGGG TGCC ACATC TCGGT CGCGTGGCTGTGGGTCACGCT C GCCATCT CG AACACGCT GCACG TGCACTCCNGCTACATTTTGCCGCTG ] [+] EMBL BX622987 [ CTC GTG GTCCAAGTGCGCACAAACAAACTTTACCAGACACGGGCACACACATACAGACAGATGCGATCATGTCGCTCACGGTGGAGCTGTTCGATCTTCCGGCACACCAGTTCCGGGTGTTTTGGGGC GCCTCCGG CAGCATGTG GCAGTCGC TGTGGGACCGTTTCCTCGACTTCACCGGTGATAACCCGCTCGCCCTTTGGACCGTCGGGTCGTACGTGTACACCTCGCTGGTCTACTGGAGCATCGGGCTGGCCTACACGCTGCTGGACGTGACC GGGC GGCC GGCGGCCCTGCGCCGGTACAAGGTGCAGCCC GGCACGAACGAACCGGTCGA CCCAG CCC GGCTGCGCACCG TCATCCGGCAGGTGCTGTTCAA CCAGTTCTGCACCGGGCTGCC G CTGCTCTTCC T CATGTACTACCTGCTGCC GGGGCAGACGC GC GACA CGA TCC GCCAGCTG CCC A CC TTCGTGACGGTCGT CTGGCAGCTCGGCGTGTGC ATCCT GATCG AGGAGGTGATGTTCTACTACAG CCACCGGTTGCTGCACGACGGCCG C ATCTACC GG TACATCCA CAAGCGGCACCACGAGT GGACGGCCCCGATCGC GATCACCGCGATGTACGCGCACCC GGTCG AG AAC GTGC TCA GC AATCT GCTG CCGA TTG CGGT ] [+] EMBL BX621222 [ CTC GTG GTCCAAGTGCGCACAAACAAACTTTACCAGACACGGGCACACACATACAGACAGATGCGATCATGTCGCTCACGGTGGAGCTGTTCGATCTTCCGGCACACCAGTTCCGGGTGTTTTGGGGC GCCTCCGG CAGCATGTG GCAGTCGC TGTGGGACCGTTTCCTCGACTTCACCGGTGATAACCCGCTCGCCCTTTGGACCGTCGGGTCGTACGTGTACACCTCGCTGGTCTACTGGAGCATCGGGCTGGCCTACACGCTGCTGGACGTGACC GGGC GGCC GGCGGCCCTGCGCCGGTACAAGGTGCAGCCC GGCACGAACGAACCGGTCGA CCCAG CCC GGCTGCGCACCG TCATCCGGCAGGTGCTGTTCAA CCAGTTCTGCACCGGGCTGCC G CTGCTCTTCC T CATGTACTACCTGCTGCC GGGGCAGACGC GC GACA CGA TCC GCCAGCTG CCC A CC TTCGTGACGGTCGT CTGGCAGCTCGGCGTGTGC ATCCT GATCG AGGAGGTGATGTTCTACTACAG CCACCGGTTGCTGCACGACGGCCG C ATCTACC GG TACATCCA CAAGCGGCACCACGAGT GGACGGCCCCGATCGC GATCACCGCGATGTACGCGCACCC GGTCG AG AAC GTGC TCA GC AATCT GCTG CCGA TTG CGGTCGGCGTGTGG ACG ACCGGG TGCC ACATC TCGGT CGCGTGGCTGTGGNTCACGCT C GCCATCT CG AACACGCT GCACG TGCACTCCGGCTACCATTTGCCGCTGCTGNCCAGCCCCGAAGCAGCACGANTTCCATCATCTGAAGTTCAACCAATGCTA ] [+] EMBL BX628924 [ GTCCAAGTGCGCACAAACAAACTTTACCAGACACGGGCACACACATACAGACAGATGCGATCATGTCGCTCACGGTGGAGCTGTTCGATCTTCCGGCACACCAGTTCCGGGTGTTTTGGGGC GCCTCCGG CAGCATGTG GCAGTCGC TGTGGGACCGTTTCCTCGACTTCACCGGTGATAACCCGCTCGCCCTTTGGACCGTCGGGTCGTACGTGTACACCTCGCTGGTCTACTGGAGCATCGGGCTGGCCTACACGCTGCTGGACGTGACC GGGC GGCC GGCGGCCCTGCGCCGGTACAAGGTGCAGCCC GGCACGAACGAACCGGTCGA CCCAG CCC GGCTGCGCACCG TCATCCGGCAGGTGCTGTTCAA CCAGTTCTGCACCGGGCTGCC G CTGCTCTTCC T CATGTACTACCTGCTGCC GGGGCAGACGC GC GACA CGA TCC GCCAGCTG CCC A C ] [+] EMBL BX622074 [ TGCGATCATGTCGCTCACGGTGGAGCTGTTCGATCTTCCGGCACACCAGTTCCGGGTGTTTTGGGGC GCCTCCGGACAGCATGTG GCAGTCGC TGTGGGACCGTTTCCTCGACTTCACCGGTGATAACCCGCTCGCCCTTTGGACCGTCGGGTCGTACGTGTACACCTCGCTGGTCTACTGGAGCATCGGGCTGGCCTACACGCTGCTGGACGTGACC GGGC GGCC GGCGGCCCTGCGCCGGTACAAGGTGCAGCCC GGCACGAACGAACCGGTCGA CCCAG CCC GGCTGCGCACCG TCATCCGGCAGGTGCTGTTCAA CCAGTTCTGCACCGGGCTGCC G CTGCTCTTCC T CATGTACTACCTGCTGCC GGGGCAGACGC GC GACA CGA TCC GCCAGCTG CCC A CC TTCGTGACGGTCGT CTGGCAGCTCGGCGTGTGC ATCCT GATCG AGGAGGTGATGTTCTACTACAG CCACCGGTTGCTGCACGACGGCCG C ATCTACC GG TACATCCA CAAGCGGCACCACGAGT GGACGGCCCCGATCGC GATCACCGCGATGTACGCGCACCC GGTCG AG AAC GTGC TCA GC AATCT GCTG CCGA TTG CGGTCGGCGTGTGG ACG ACCGGG TGCC ACATC TCGGT CGCGTGGCTGTGGTTCACGCT C GCCATCT CG AACACGCT GCACG TGCACTCCGGCTACCATTTGCCGCTGCTGCCCAG CCCGGAGCAGCACGATTTCCATCATCTGAAGTTCAACCAATGCTACGGCGTGCTCGGTGTGCTGGA ] [+] EMBL BX617863 [ CGATCATGTCGCTCACGGTGGAGCTGTTCGATCTTCCGGCACACCAGTTCCGGGTGTTTTGGGGC GCCTCCGG CAGCATGTG GCAGTCGC TGTGGGACCGTTTCCTCGACTTCACCGGTGATAACCCGCTCGCCCTTTGGACCGTCGGGTCGTACGTGTACACCTCGCTGGTCTACTGGAGCATCGGGCTGGCCTACACGCTGCTGGACGTGACC GGGC GGCC GGCGGCCCTGCGCCGGTACAAGGTGCAGCCC GGCACGAACGAACCGGTCGA CCCAG CCC GGCTGCGCACCG TCATCCGGCAGGTGCTGTTCAA CCAGTTCTGCACCGGGCTGCC G CTGCTCTTCC T CATGTACTACCTGCTGCC GGGGCAGACGC GC GACA CGA TCC GCCAGCTG CCC A CC TTCGTGACGGTCGT CTGGCAGCTCGGCGTGTGC ATCCT GATCG AGGAGGTGATGTTCTACTACAG CCACCGGTTGCTGCACGACGGCCG C ATCTACC GG TACATCCA CAAGCGGCACCACGAGT GGACGGCCCCGATCGC GATCACCGCGATGTACGCGCACCC GGTCG AG AAC GTGC TCA GC AATCT GCTG CCGA TTG CGGTC ] [+] EMBL BX609759 [ GGTGGAGCTGTTCGATCTTCCGGCACACCAGTTCCGGGTGTTTTGGGGC GCCTCCGG CAGCATGTG GCAGTCGC TGTGGGACCGTTTCCTCGACTTCACCGGTGATAACCCGCTCGCCCTTTGGACCGTCGGGTCGTACGTGTACACCTCGCTGGTCTACTGGAGCATCGGGCTGGCCTACACGCTGCTGGACGTGACC GGGC GGCC GGCGGCCCTGCGCCGGTACAAGGTGCAGCCC GGCACGAACGAACCGGTCGA CCCAG CCC GGCTGCGCACCG TCATCCGGCAGGTGCTGTTCAA CCAGTTCTGCACCGGGCTGCC G CTGCTCTTCC T CATGTACTACCTGCTGCC GGGGCAGACGC GC GAC ] [+] EMBL BM642069 [ ccGACCGTTTCCTCGACTTCACCGGTGATAACCCGCTCGCCCTTTGGACCGTCGGGTCGTACGTGTACACCTCGCTGGTCTACTGGAGCATCGGGCTGGCCTACACGCTGCTGGACGTGACC GGGC GGCC GGCGGCCCTGCGCCGGTACAAGGTGCAGCCC GGCACGAACGAACCGGTCGA CCCAG CCC GGCTGCGCACCG TCATCCGGCAGGTGCTGTTCAA CCAGTTCTGCACCGGGCTGCC G CTGCTCTTCC T CATGTACTACCTGCTGCC GGGGCAGACGC GC GACA CGA TCC GCCAGCTG CCC A CC TTCGTGACGGTCGT CTGGCAGCTCGGCGTGTGC ATCCT GATCG AGGAGGTGATGTTCTACTACAG CCACCGGTTGCTGCACGACGGCCG C ATCTACC GG TACATCCA CAAGCGGCACCACGAGT GGACGGCCCCGATCGC GATCACCGCGATGTACGCGCACCC GGTCG AG AAC GTGC TCA GC AATCT GCTG CCGA TTG CGGTCGGCGTGTGG ACG ACCGGG TGCC ACATC TCGGT CGCGTGGCTGTGGTTCACGCT C GCCATCT CG AACACGCT GCACG TGCACTCCGGCTACCATTTGCCGCTGCTGCCCAG CCCGGAGCAGCACGATTT ] [+] EMBL BM585078 [ ccgCCCGCTCGCCCTTTGGACCGTCGGGTCGTACGTGTACACCTCGCTGGTCTACTGGAGCATCGGGCTGGCCTACACGCTGCTGGACGTGACC GGGC GGCC GGCGGCCATGCGCCGGTACAAGGTGCAGCCC GGCACGAACGAACCGGTCGA CCCAG CCC GGCTGCGCACCG TCATCCGGCAGGTGCTGTTCAA CCAGTTCTGCACCGGGCTGCC G CTGCTCTTCC T CATGTACTACCTGCTGCC GGGGCAGACGC GC GACA CGA TCC GCCAGCTG CCC A CC TTCGTGACGGTCGT CTGGCAGCTCGCCGTGTGC ATCCT GATCG AGGAGGTGATGTTCTACTACAG CCACCGGTTGCTGCACGACGGCCG C ATCTACC GG TACATCCA CAAGCGGCACCACGAGT GGACGGCCCCGATCGC GATCACCGCGATGTACGCGCACCC GGTCG AG AAC GTGC TCA GC AATCT GCTG CCGA TTG CGGTCGGCGTGTGG ACG ACCGGG TGCC ACATC TCGGT CGCGTGGCTGTGGTTCACGCT C GCCATCT CG AACACGCT GCACG TGCACTCCGGCTACCATTTGCCGCTGCTGCCCAG CCCGGAGCAGCACGATTTCCATCATCTGAAGTTCAACC ] [+] EMBL BX628954 [ CTGGTCTACTGGAGCATCGGGCTGGCCTACACGCTGCTGGACGTGACC GGGC GGCC GGCGGCCCTGCGCCGGTACAAGGTGCAGCCC GGCACGAACGAACCGGTCGA CCCAG CCC GGCTGCGCACCG TCATCCGGCAGGTGCTGTTCAA CCAGTTCTGCACCGGGCTGCC G CTGCTCTTCC T CATGTACTACCTGCTGCC GGGGCAGACGC GC GACA CGA TCC GCCAGCTG CCC A CC TTCGTGACGGTCGT CTGGCAGCTCGGCGTGTGC ATCCT GATCG AGGAGGTGATGTTCTACTACAG CCACCGGTTGCTGCACGACGGCCG C ATCTACC GG TACATCCA CAAGCGGCACCACGAGT GGACGGCCCCGATCGC GATCACCGCGATGTACGCGCACCC GGTCG AG AAC GTGC TCA GC AATCT GCTG CCGA TTG CGGTCGGCGTGTGG ACG ACCGGG TGCC ACATC TCGGT CGCGTGGCTGTGGTTCACGCT C GCCATCT CG AACACGCT GCACG TGCACTCCGGCTACCATTTGCCGCTGCTGCCCAG CCCGGAGCAGCACGATTTCCATCATCTGAAGTTCAACCAATGCTACGGCGTGCTCGGTGTGCTGGA ] [+] EMBL BX609885 [ GGCCCCGATCGC GATCACCGCGATGTACGCGCACCC GGTCG AG AAC GTGC TCA GC AATCT GCTG CCGA TTG CGGTCGGCGTGTGG ACG ACCGGG TGCC ACATC TCGGT CGCGTGGCTGTGGTTCACGCT C GCCATCT CG AACACGCT GCACG TGCACTCCGGCTACCATTTGCCGCTGCTGCCCAG CCCGGAGCAGCACGATTTCCATCATCTTAAGTTCAACCAATGCTACGGCGTGCTCGGTGTGCTGGACTGGCTGCACGGCACGAGCGAAATGTTTCACCGGTCGAAGCAGGCGAAGCGGGACTACATCATGACCAGCCTGGAGCCGGTGCGAGAAACCCATCCCGATCAGTAGCTCCTGTAACGCACCGAGGGTGTCCAGAGGGGAAATCGTCTTCCAAGGACCATTCAATATGTTGATGGCGATGTTATTATGTTAGAGCAGCCGCTATATGACTAAGCTTGGCTGGTATCAAGCCCAGCGAAAAGCCTGTTTTGAACCAATGGAACAGGAGCAAAGCAATTACAATGAGAGTACATATCTATATATAT] consensusID : consensus_10173#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 776 fasta sequence [GCCAGAATCGGCACNGAGGGTCNATTGAACGGTGCGAACACGCGCGCTCGTGGTCCAAGTGCGCACAAACAAACTTTACCAGACACGGGCACACACATACAGACAGATGCGATCATGTCGCTCACGGTGGAGCTGTTCGATCTTCCGGCACACCAGTTCCGGGTGTTTTGGGGCGCCTCCGGCAGCATGTGGCAGTCGCTGTGGGACCGTTTCCTCGACTTCACCGGTGATAACCCGCTCGCCCTTTGGACCGTCGGGTCGTACGTGTACACCTCGCTGGTCTACTGGAGCATCGGGCTGGCCTACACGCTGCTGGACGTGACCGGGCGGCCGGCGGCCCTGCGCCGGTACAAGGTGCAGCCCGGCACGAACGAACCGGTCGACCCAGCCCGGCTGCGCACCGTCATCCGGCAGGTGCTGTTCAACCAGTTCTGCGACCGGGCTGCCGCTGCTCTTCCTCATGTACTACCTGCTGCCGGGGCAGACGCGCGACACGATCCGCCAGCTGCCCACCTTCGTGACGGTCGTCTGGCAGCTCGGCGTGTGCATCCTGATCGAGGAGGTGATGTTCTACTACAGCCAGCCGGTTGCTGCACGACGGCCGCATCTACCGGTACATCCACAAGCGGNACCACCGAGTGGACGGCCCCGATCGCNATCACCGCCGATGTACGCCGCACCCAGNNTCGCACGAACATGCTCAGCCAAACTCTGCTGCCCATTTGCCGCGCTACGACGCCGCTNTGCNACCAAACCGGGGTTGCCCNACAATCTCC] [+] EMBL BX466362 [GCCAGAATCGGCACNGAGGGTCNATTGAACGGTGCGAACACGCGCGCTCGTGGTCCAAGTGCGCACAAACAAACTTTACCAGACACGGGCACACACATACAGACAGATGCGATCATGTCGCTCACGGTGGAGCTGTTCGATCTTCCGGCACACCAGTTCCGGGTGTTTTGGGGCGCCTCCGGCAGCATGTGGCAGTCGCTGTGGGACCGTTTCCTCGACTTCACCGGTGATAACCCGCTCGCCCTTTGGACCGTCGGGTCGTACGTGTACACCTCGCTGGTCTACTGGAGCATCGGGCTGGCCTACACGCTGCTGGACGTGACCGGGCGGCCGGCGGCCCTGCGCCGGTACAAGGTGCAGCCCGGCACGAACGAACCGGTCGACCCAGCCCGGCTGCGCACCGTCATCCGGCAGGTGCTGTTCAACCAGTTCTGCGACCGGGCTGCCGCTGCTCTTCCTCATGTACTACCTGCTGCCGGGGCAGACGCGCGACACGATCCGCCAGCTGCCCACCTTCGTGACGGTCGTCTGGCAGCTCGGCGTGTGCATCCTGATCGAGGAGGTGATGTTCTACTACAGCCAGCCGGTTGCTGCACGACGGCCGCATCTACCGGTACATCCACAAGCGGNACCACCGAGTGGACGGCCCCGATCGCNATCACCGCCGATGTACGCCGCACCCAGNNTCGCACGAACATGCTCAGCCAAACTCTGCTGCCCATTTGCCGCGCTACGACGCCGCTNTGCNACCAAACCGGGGTTGCCCNACAATCTCC] [+] EMBL BX606734 [ ATTGAACGGTGCGAACACGCGCGCTCGTGGTCCAAGTGCGCACAAACAAACTTTACCAGACACGGGCACACACATACAGACAGATGCG ] consensusID : consensus_10173#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 161 fasta sequence [CAGCCACCGGTGGCTGCACGACGGCCGCATCTACCGGTACAGCCACAAGCGGCACCACGAGGGGACGGCCCCGATCGCGATCACCGCGAACACCGCGCGCACCCGGGCGAGAACGTGCTCAGCAATCTGCTGCCGAAGGCGGTCGGCGGGTGGACGACCGG] [+] EMBL BX610287 [CAGCCACCGGTGGCTGCACGACGGCCGCATCTACCGGTACAGCCACAAGCGGCACCACGAGGGGACGGCCCCGATCGCGATCACCGCGAACACCGCGCGCACCCGGGCGAGAACGTGCTCAGCAATCTGCTGCCGAAGGCGGTCGGCGGGTGGACGACCGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10173#0 ---CCAAGAATCGCCCACGGGTCGATTGAACGGTGCGAACGCGCGCGCTCGTGGTCCAAG 57 consensus_10173#2 ------------------------------------------------------------ consensus_10173#1 GCCAGAATCGGCACNGAGGGTCNATTGAACGGTGCGAACACGCGCGCTCGTGGTCCAAGT 60 consensus_10173#0 TGCGCACAAACAAACTTTACCAGACACGGGCACACACATACAGACAGATGCGATCATGTC 117 consensus_10173#2 ------------------------------------------------------------ consensus_10173#1 GCGCACAAACAAACTTTACCAGACACGGGCACACACATACAGACAGATGCGATCATGTCG 120 consensus_10173#0 GCTCACGGTGGAGCTGTTCGATCTTCCGGCACACCAGTTCCGGGTGTTTTGGGGCGCCTC 177 consensus_10173#2 ------------------------------------------------------------ consensus_10173#1 CTCACGGTGGAGCTGTTCGATCTTCCGGCACACCAGTTCCGGGTGTTTTGGGGCGCCTCC 180 consensus_10173#0 CGGCAGCATGTGGCAGTCGCTGTGGGACCGTTTCCTCGACTTCACCGGTGATAACCCGCT 237 consensus_10173#2 ------------------------------------------------------------ consensus_10173#1 GGCAGCATGTGGCAGTCGCTGTGGGACCGTTTCCTCGACTTCACCGGTGATAACCCGCTC 240 consensus_10173#0 CGCCCTTTGGACCGTCGGGTCGTACGTGTACACCTCGCTGGTCTACTGGAGCATCGGGCT 297 consensus_10173#2 ------------------------------------------------------------ consensus_10173#1 GCCCTTTGGACCGTCGGGTCGTACGTGTACACCTCGCTGGTCTACTGGAGCATCGGGCTG 300 consensus_10173#0 GGCCTACACGCTGCTGGACGTGACCGGGCGGCCGGCGGCCCTGCGCCGGTACAAGGTGCA 357 consensus_10173#2 ------------------------------------------------------------ consensus_10173#1 GCCTACACGCTGCTGGACGTGACCGGGCGGCCGGCGGCCCTGCGCCGGTACAAGGTGCAG 360 consensus_10173#0 GCCCGGCACGAACGAACCGGTCGACCCAGCCCGGCTGCGCACCGTCATCCGGCAGGTGCT 417 consensus_10173#2 ------------------------------------------------------------ consensus_10173#1 CCCGGCACGAACGAACCGGTCGACCCAGCCCGGCTGCGCACCGTCATCCGGCAGGTGCTG 420 consensus_10173#0 GTTCAACCAGTTCTGCACCGGGCTGCCGCTGCTCTTCCTCATGTACTACCTGCTGCCGGG 477 consensus_10173#2 ------------------------------------------------------------ consensus_10173#1 TTCAACCAGTTCTGCGACCGGGCTGCCGCTGCTCTTCCTCATGTACTACCTGCTGCCGGG 480 consensus_10173#0 GCAGACGCGCGACACGATCCGCCAGCTGCCCACCTTCGTGACGGTCGTCTGGCAGCTCGG 537 consensus_10173#2 ------------------------------------------------------------ consensus_10173#1 GCAGACGCGCGACACGATCCGCCAGCTGCCCACCTTCGTGACGGTCGTCTGGCAGCTCGG 540 consensus_10173#0 CGTGTGCATCCTGATCGAGGAGGTGATGTTCTACTACAGCCA-CCGGTTGCTGCACGACG 596 consensus_10173#2 ------------------------------------CAGCCA-CCGGTGGCTGCACGACG 23 consensus_10173#1 CGTGTGCATCCTGATCGAGGAGGTGATGTTCTACTACAGCCAGCCGGTTGCTGCACGACG 600 ****** ***** *********** consensus_10173#0 GCCGCATCTACCGGTACATCCACAAGCGGCACCAC-GAGTGGACGGCCCCGATCGCGATC 655 consensus_10173#2 GCCGCATCTACCGGTACAGCCACAAGCGGCACCAC-GAGGGGACGGCCCCGATCGCGATC 82 consensus_10173#1 GCCGCATCTACCGGTACATCCACAAGCGGNACCACCGAGTGGACGGCCCCGATCGCNATC 660 ****************** ********** ***** *** **************** *** consensus_10173#0 ACCGC----GATG--TACGCGCACCCGGTCGAGAACGTGCTCAGCAA---TCTGCTGCCG 706 consensus_10173#2 ACCGC----GAACACCGCGCGCACCCGGGCGAGAACGTGCTCAGCAA---TCTGCTGCCG 135 consensus_10173#1 ACCGCCGATGTACGCCGCACCCAGNNTCGCACGAACATGCTCAGCCAAACTCTGCTGCCC 720 ***** * * * ** * **** ******** * ********* consensus_10173#0 ATT----GCGGT-CGGCG--TGTGGACGACCGGGTGCCACATCTCGGTCGCGTGGCTGTG 759 consensus_10173#2 AAG----GCGGT-CGGCG--GGTGGACGACCGG--------------------------- 161 consensus_10173#1 ATTTGCCGCGCTACGACGCCGCTNTGCNACCAAACCGGGGTTGCCCNACAATCTCC---- 776 * *** * ** ** * * *** consensus_10173#0 GTTCACGCTCGCCATCTCGAACACGCTGCACGTGCACTCCGGCTACCATTTGCCGCTGCT 819 consensus_10173#2 ------------------------------------------------------------ consensus_10173#1 ------------------------------------------------------------ consensus_10173#0 GCCCAGCCCGGAGCAGCACGATTTCCATCATCTGAAGTTCAACCAATGCTACGGCGTGCT 879 consensus_10173#2 ------------------------------------------------------------ consensus_10173#1 ------------------------------------------------------------ consensus_10173#0 CGGTGTGCTGGACTGGCTGCACGGCACGAGCGAAATGTTTCACCGGTCGAAGCAGGCGAA 939 consensus_10173#2 ------------------------------------------------------------ consensus_10173#1 ------------------------------------------------------------ consensus_10173#0 GCGGGACTACATCATGACCAGCCTGGAGCCGGTGCGAGAAACCCATCCCGATCAGTAGCT 999 consensus_10173#2 ------------------------------------------------------------ consensus_10173#1 ------------------------------------------------------------ consensus_10173#0 CCTGTAACGCACCGAGGGTGTCCAGAGGGGAAATCGTCTTCCAAGGACCATTCAATATGT 1059 consensus_10173#2 ------------------------------------------------------------ consensus_10173#1 ------------------------------------------------------------ consensus_10173#0 TGATGGCGATGTTATTATGTTAGAGCAGCCGCTATATGACTAAGCTTGGCTGGTATCAAG 1119 consensus_10173#2 ------------------------------------------------------------ consensus_10173#1 ------------------------------------------------------------ consensus_10173#0 CCCAGCGAAAAGCCTGTTTTGAACCAATGGAACAGGAGCAAAGCAATTACAATGAGAGTA 1179 consensus_10173#2 ------------------------------------------------------------ consensus_10173#1 ------------------------------------------------------------ consensus_10173#0 CATATCTATATATAT 1194 consensus_10173#2 --------------- consensus_10173#1 --------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||