These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1377#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 473 fasta sequence [AAGCGGAGACGATAAAAAAGACGAGAAGATTTTTTCATTTTATTCCACGGGTGTATTAAAGATAGTGAGTGTGTGCACAAAGCAGGAAGGAAAACAGGAAGCAAACAAACACAACAAAATGTATGCATTGTGAGATCTTGATAGTGTGAATTAAGGAAATTAGAAAACAAACAGAACAAACAGAACAAAACACTCGATAAATCTTTCAGCACGAGTGTGTAGAAGAAAGCAACGAAATCAACTAACGACAAGAAAGCTCCACACGGGTGAAAAATGCTGCCAAAGAAAACTCTGCACGAGAGCAAATGAAAGGAGCAATTTCAGTGGATCGTTTTGTGATCGTACGAAAACCAATCGAAAAGGGCAGAAAAGTCTATAAACATGCGTAGAATATTTTGAAAAGTATCTGAGATAGATTCAGGTAAAGGAGAAAAAGAGATACAGAAAGAGATACATATAGCAAAATGTAATAC] [+] EMBL AGA285483 [AAGCGGAGACGATAAAAAAGACGAGAAGATTTTTTCATTTTATTCCACGGGTGTATTAAAGATAGTGAGTGTGTGCACAAAGCAGGAAGGAAAACAGGAAGCAAACAAACACAACAAAATGTATGCATTGTGAGATCTTGATAGTGTGAATTAAGGAAATTAGAAAACAAACAGAACAAACAGAACAAAACACTCGATAAATCTTTCAGCACGAGTGTGTAGAAGAAAGCAACGAAATCAACTAACGACAAGAAAGCTCCACACGGGTGAAAAATGCTGCCAAAGAAAACTCTGCACGAGAGCAAATGAAAGGAGCAATTTCAGTGGATCGTTTTGTGATCGTACGAAAACCAATCGAAAAGGGCAGAAAAGTCTATAAACATGCGTAGAATATTTTGAAAAGTATCTGAGATAGATTCAGGTAAAGGAGAAAAAGAGATACAGAAAGAGATACATATAGCAAAATGTAATAC] consensusID : consensus_1377#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 448 fasta sequence [CCGCGGATGGATCCAAGCACGATGCTTACCATATTTCAAACCATTGCTAGATGAATAGTTCTACCCATTTTAAAGCCCATACGAGGGGGGAGACGAGAAGATTTTTTCATTTTATTCCAAGGGTGTATTAAAGATATTGAGTGTGTGCACAAAGCAGGAAGGAAAACAGGAAGCAAACAAACACAACAAAATGTATGCATTGTGAGATCTTGATAGTGTGAATTAAGGAAATTATAAAACAAACTGAACAAACAGAACAAAACACTCGATAAATCTTTCAGCACGAGTGTGTACAAGAAAGCGACGAAATCAACTAACGACTAGAAAGCTCCACACGGGTGAAAAATGCTGCCAAAGAAAACTCTGCACGATATAACACGTTTTCCACTCGAACGGGGAAAAGTGCGATAAGAGATGACATGCTTAAACACACAAATAGAATTGGAAA] [+] EMBL BM644784 [CCGCGGATGGATCCAAGCACGATGCTTACCATATTTCAAACCATTGCTAGATGAATAGTTCTACCCATTTTAAAGCCCATACGAGGGGGGAGACGAGAAGATTTTTTCATTTTATTCCAAGGGTGTATTAAAGATATTGAGTGTGTGCACAAAGCAGGAAGGAAAACAGGAAGCAAACAAACACAACAAAATGTATGCATTGTGAGATCTTGATAGTGTGAATTAAGGAAATTATAAAACAAACTGAACAAACAGAACAAAACACTCGATAAATCTTTCAGCACGAGTGTGTACAAGAAAGCGACGAAATCAACTAACGACTAGAAAGCTCCACACGGGTGAAAAATGCTGCCAAAGAAAACTCTGCACGATATAACACGTTTTCCACTCGAACGGGGAAAAGTGCGATAAGAGATGACATGCTTAAACACACAAATAGAATTGGAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1377#0 ------------------------------------------------------------ consensus_1377#1 CCGCGGATGGATCCAAGCACGATGCTTACCATATTTCAAACCATTGCTAGATGAATAGTT 60 consensus_1377#0 ------------AAGCGGAGACGATAAAAAAGACGAGAAGATTTTTTCATTTTATTCCAC 48 consensus_1377#1 CTACCCATTTTAAAGCCCATACGAGGGGGGAGACGAGAAGATTTTTTCATTTTATTCCAA 120 **** * **** ***************************** consensus_1377#0 GGGTGTATTAAAGATAGTGAGTGTGTGCACAAAGCAGGAAGGAAAACAGGAAGCAAACAA 108 consensus_1377#1 GGGTGTATTAAAGATATTGAGTGTGTGCACAAAGCAGGAAGGAAAACAGGAAGCAAACAA 180 **************** ******************************************* consensus_1377#0 ACACAACAAAATGTATGCATTGTGAGATCTTGATAGTGTGAATTAAGGAAATTAGAAAAC 168 consensus_1377#1 ACACAACAAAATGTATGCATTGTGAGATCTTGATAGTGTGAATTAAGGAAATTATAAAAC 240 ****************************************************** ***** consensus_1377#0 AAACAGAACAAACAGAACAAAACACTCGATAAATCTTTCAGCACGAGTGTGTAGAAGAAA 228 consensus_1377#1 AAACTGAACAAACAGAACAAAACACTCGATAAATCTTTCAGCACGAGTGTGTACAAGAAA 300 **** ************************************************ ****** consensus_1377#0 GCAACGAAATCAACTAACGACAAGAAAGCTCCACACGGGTGAAAAATGCTGCCAAAGAAA 288 consensus_1377#1 GCGACGAAATCAACTAACGACTAGAAAGCTCCACACGGGTGAAAAATGCTGCCAAAGAAA 360 ** ****************** ************************************** consensus_1377#0 ACTCTGCACGAGAGCAAATGAAAGGAGCAATTTCAGTGGATCGTTTTGTGATCGTACGAA 348 consensus_1377#1 ACTCTGCACGATA-----------------------TAACACGTTTTCCACTCGAACGGG 397 *********** * * ****** *** *** consensus_1377#0 AACCAAT-CGAAAAGGGCAGAAAAGTCTATAAACATGCGTAGAATATTTTGAAAAGTATC 407 consensus_1377#1 GAAAAGTGCGATAAGAGATGACATGCTTAAACACACAAATAGAAT----TGGAAA----- 448 * * * *** *** * ** * * ** * *** ****** ** *** consensus_1377#0 TGAGATAGATTCAGGTAAAGGAGAAAAAGAGATACAGAAAGAGATACATATAGCAAAATG 467 consensus_1377#1 ------------------------------------------------------------ consensus_1377#0 TAATAC 473 consensus_1377#1 ------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||