These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1409#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 644 fasta sequence [CCGGTGCGAACGATTTACAGTGTGTAAGGAATGCAAATAAACAAACAAGAAAATATTGTAAGCCGAAAACAAATTTGAGTGTGTGTGTATGAGCAAATTATGCGAAGTGTGCAAGTGTGTGTGTTAAAGAGTGTAAATGCGAAAAAGAAGAAGAATAAACATAAAACAACAAACAAGAACAAAACTAAAACTTAGAAGAAAAAATAAGAAGCAAGAAATAAACACACACACAGACACATACCAAACAAGATGGTAGAGCACCGTTTGCTGCACGTACGGTGAAGAAGAAGAAAAAAGCGGTACGAATAGCTAAAATAAATAAAAGAAAATGAAAAGGTAACTAAATTTAAAGCAAACAGCAATTGTAGGAAACATTAACAATTAACAACACGGAATAATTGCATCAAACACTCTCACACACATACACACTCGCAAACACATACATTCTGAAAACACGTGGAAAAGAAAATGAAATGAAATAACATACTTAAAGAAATAACAAAACAAAATGAAACAAACAAGCAAACAACAAAGAACAACAAAGGAGATGCAAACAAAAAAGATGCAAAATAGTGGAAAATCACATAGTGGTACACGGAAAAGAGGGGGTAAGGAAGGTCATTGCGGATGGGTAACGGGGGAAG] [+] EMBL BM575758 [CCGGTGCGAACGATTTACAGTGTGTAAGGAATGCAAATAAACAAACAAGAAAATATTGTAAGCCGAAAACAAATTTGAGTGTGTGTGTATGAGCAAATTATGCGAAGTGTGCAAGTGTGTGTGTTAAAGAGTGTAAATGCGAAAAAGAAGAAGAATAAACATAAAACAACAAACAAGAACAAAACTAAAACTTAGAAGAAAAAATAAGAAGCAAGAAATAAACACACACACAGACACATACCAAACAAGATGGTAGAGCACCGTTTGCTGCACGTACGGTGAAGAAGAAGAAAAAAGCGGTACGAATAGCTAAAATAAATAAAAGAAAATGAAAAGGTAACTAAATTTAAAGCAAACAGCAATTGTAGGAAACATTAACAATTAACAACACGGAATAATTGCATCAAACACTCTCACACACATACACACTCGCAAACACATACATTCTGAAAACACGTGGAAAAGAAAATGAAATGAAATAACATACTTAAAGAAATAACAAAACAAAATGAAACAAACAAGCAAACAACAAAGAACAACAAAGGAGATGCAAACAAAAAAGATGCAAAATAGTGGAAAATCACATAGTGGTACACGGAAAAGAGGGGGTAAGGAAGGTCATTGCGGATGGGTAACGGGGGAAG] consensusID : consensus_1409#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 581 fasta sequence [GTTTCCTTCTTAAGAAACCTTCGTCACAACTGCTGCTCTCTACAGCGCATAAGCACACACCAAAAACAAACAAAACAAAGTAAAAGAAGAAGAAGAAAAAAAACCATTAGGCATTAAAACGTAAAAGTTATACAACAGCAAGCAACCGAAAACTGAAAACAAAAGAAAAAAAAAAGAACAACAACATGAAGCAAACCATCATCCGTAGTGTGCGAACGATTTACAGTGTGTAAGGAATGCAAATAAACAAACAAGAAAATATTGTAAGCCGAAAACAAATTTGAGTGTGTGTGTATGAGCAAATTATGCGAAGTGTGCAAGTGTGTGTGTTAAAGAGTGAAAAAAAACCATTAGGCATTAAAACGTAAAAGTTATACAACAGCAAGCAACCGAAAACTGAAAACAAAAGAAAAAAAAAAGAACAACAACATGAAGCAAACCATCATCCGTAGTGTGCGAACGATTTACAGTGTGTAAGGAATGCAAATAAACAAACAAGAAAATATTGTAAGCCGAAAACAAATTTGAGTGTGTGTGTATGAGCAAATTATGCGAAGTGTGCAAGTGTGTGTGTTAAAGAG] [+] EMBL BX611197 [GTTTCCTTCTTAAGAAACCTTCGTCACAACTGCTGCTCTCTACAGCGCATAAGCACACACCAAAAACAAACAAAACAAAGTAAAAGAAGAAGAAGAAAAAAAACCATTAGGCATTAAAACGTAAAAGTTATACAACAGCAAGCAACCGAAAACTGAAAACAAAAGAAAAAAAAAAGAACAACAACATGAAGCAAACCATCATCCGTAGTGTGCGAACGATTTACAGTGTGTAAGGAATGCAAATAAACAAACAAGAAAATATTGTAAGCCGAAAACAAATTTGAGTGTGTGTGTATGAGCAAATTATGCGAAGTGTGCAAGTGTGTGTGTTAAAGAGTGAAAAAAAACCATTAGGCATTAAAACGTAAAAGTTATACAACAGCAAGCAACCGAAAACTGAAAACAAAAGAAAAAAAAAAGAACAACAACATGAAGCAAACCATCATCCGTAGTGTGCGAACGATTTACAGTGTGTAAGGAATGCAAATAAACAAACAAGAAAATATTGTAAGCCGAAAACAAATTTGAGTGTGTGTGTATGAGCAAATTATGCGAAGTGTGCAAGTGTGTGTGTTAAAGAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1409#0 CCGGTGCGAACGATTTACAGTGTGTAAGGAATGCAAATAAACAAACAA--GAAAATATTG 58 consensus_1409#1 ----------------------------GTTTCCTTCTTAAGAAACCTTCGTCACAACTG 32 * * * * ** **** * * * ** consensus_1409#0 TAAGCCGAAAACAAATTTGAGTGTGTGTGTATGAGCAAATTATGCGAAGTGTGCAAGTGT 118 consensus_1409#1 CTGCTCTCTACAGCGCATAAGCACACAC-CAAAAACAAACAAAACAAAGTAAAAGAAGAA 91 * * * ** * * **** * * **** * consensus_1409#0 GTGTGTTAAAGAGTGTAAATGCGAAAAAGAAGAAGAATAAACATAAAACAACAAACAAGA 178 consensus_1409#1 GAAGAAAAAAAACCATTAG-GCATTAAAACGTAAAAGT---TATACAACAGCAAGCAACC 147 * *** * * * ** *** ** * * *** **** *** *** consensus_1409#0 ACAAAACTAAAACTTAGAAGAAAAAATAAGAAGCAAGAAATAAACACACACACAGACACA 238 consensus_1409#1 GAAAACTGAAAAC--AAAAGAAAAAAAAAAGAACAACAACATGAAGCAAACCATCATCCG 205 *** ***** * ********* ** * *** ** * ** ** * * consensus_1409#0 TACCAAACAAGATGGTAGAGCACCGTTTGCTGCACGTACGGTGAAGAAGAAGAAAAAAGC 298 consensus_1409#1 TAGTGTGCGA-ACGATTTA-CAGTGTGTAAGGAATGCA-AATAAACAA--ACAAGAAAAT 260 ** * * * * * * ** ** * * * * * * ** ** * ** *** consensus_1409#0 GGTACGAATAGCTAAAATAAATAAAAGAAAATGAAAAGGTAACTAAATTTAAAGCAAACA 358 consensus_1409#1 ATTGTAAGCCGAAAACAAATTTGAGTGTGTGTGTATGAGCAAATTA-TGCGAAGTGTGCA 319 * * * ** * * * * * ** * * ** * * * *** ** consensus_1409#0 GCAAT-TGTAGGAAACATTAACAATTAACAACACGGAATAATTGCATCAAACACTCTCAC 417 consensus_1409#1 AGTGTGTGTGTTAAAGAGTGAAAAAAAACCATTAGGCATTAAAACGTAAAAG--TTATAC 377 * *** *** * * * ** *** * ** ** * * * *** * ** consensus_1409#0 ACACATACACACTCGCAAAC-ACATACATTCTGAAAACACGTGGAAAAGAAAATGAAATG 476 consensus_1409#1 AACAGCAAGCAACCGAAAACTGAAAACAAAAGAAAAAAAAAAGAACAACAACATGAAGCA 437 * * ** ** **** * *** **** * * * ** ** ***** consensus_1409#0 AAATAACATACTTAAAGAAATAACAAAACAAAATGAAACAAACAAGCAAACAA-CAAAGA 535 consensus_1409#1 AACCATCATCCGTAGTGTGCGAACGATTTACAGTGTGTAAGGAATGCAAATAAACAAACA 497 ** * *** * ** * *** * * * ** * * ***** ** **** * consensus_1409#0 ACAACAAAGGAGATGCAAACAAAAAAGATGCAAAATAGTGGAAAATCACATAGTGGTACA 595 consensus_1409#1 AGAAAATATTGTAAGCCGAAAACAAATTTGAGTGTGTGTGTATGAGCAAATTATGCGAAG 557 * ** * * * ** * ** *** ** *** * * ** ** ** * consensus_1409#0 CGGAAAAGAGGGGGTAAGGAAGGTCATTGCGGATGGGTAACGGGGGAAG 644 consensus_1409#1 TGTGCAAGTGTGTGTGTTAAAGAG------------------------- 581 * *** * * ** *** |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||