These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1559#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 702 fasta sequence [CCGGCAAGCTGATGGAGGATCTGGCGAGCGTCGATCAGAACGATCCCCAGCAGCAACTGATCGGAGGAGATCAGGAGAACAGCTTCCCGCTGGAGTGGTTTGCGAACGAAATGTCCACCAATCCGACCCTGGCCAAATCGATTCTGCAACGTTTCGTCGACACCAATCGCGACGGGCTGCTGGAAACGGGCGAGCTGATGCCGGGCGCGGGAGCGAACGGTAACGAGCTTGGGTCTGAGCTGTTCTAAGAAACGTCTCTTCTCTTCAAAAGCTCACCCAAAGCAAAGTCATTAAGGGATGGCGTCGTCTGCTAGTGGCTTGAACGTGTTTAGACTGGAGTCTGGATGGCATGGACAAAAGGGCACACCAGCAGGACACTTTCTCTGGACGCTACACAGTTATCTACATCTCTCCGCCACTCAACCATCGATTCCTGCACAAGCAACCCGTTTCTTTCAAATCCAAATGAGGCTGGCATTACTCGAATTTCCCCCCGATCTACAACTATATAAACATCCATTTGATTTATTGCAAACAAAAAAACTCCAAGAGCATATAAAATATACACGAATCTTTGAAAAAGATTAAAATCAAATGATCCTCCTCATCTCCTTCTCTCTCTCTTACACTCCTAGAGGTAAAGCAACAGAGCGGCGTTTTCCCCGCAGTTGTCTTGTTTGATTCTTTCGTTTGTACAAAGAC] [+] EMBL BM633862 [CCGGCAAGCTGATGGAGGATCTGGCGAGCGTCGATCAGAACGATCCCCAGCAGCAACTGATCGGAGGAGATCAGGAGAACAGCTTCCCGCTGGAGTGGTTTGCGAACGAAATGTCCACCAATCCGACCCTGGCCAAATCGATTCTGCAACGTTTCGTCGACACCAATCGCGACGGGCTGCTGGAAACGGGCGAGCTGATGCCGGGCGCGGGAGCGAACGGTAACGAGCTTGGGTCTGAGCTGTTCTAAGAAACGTCTCTTCTCTTCAAAAGCTCACCCAAAGCAAAGTCATTAAGGGATGGCGTCGTCTGCTAGTGGCTTGAACGTGTTTAGACTGGAGTCTGGATGGCATGGACAAAAGGGCACACCAGCAGGACACTTTCTCTGGACGCTACACAGTTATCTACATCTCTCCGCCACTCAACCATCGATTCCTGCACAAGCAACCCGTTTCTTTCAAATCCAAATGAGGCTGGCATTACTCGAATTTCCCCCCGATCTACAACTATATAAACATCCATTTGATTTATTGCAAACAAAAAAACTCCAAGAGCATATAAAATATACACGAATCTTTGAAAAAGATTAAAATCAAATGATCCTCCTCATCTCCTTCTCTCTCTCTTACACTCCTAGAGGTAAAGCAACAGAGCGGCGTTTTCCCCGCAGTTGTCTTGTTTGATTCTTTCGTTTGTACAAAGAC] consensusID : consensus_1559#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 231 fasta sequence [CGAGCTGATGCCGGGCGCGGGAGCGAACGGTAACGAGCTGGGGTCTGAGCTGTCCTAAGAAACGTCTCTGCTCTGCAAAAGCTCACCCAAAGCAAAGTCATTAAGGGAAGGCGTCGTCTGCTAGTGGCTTGAACGTGGTTAGACTGGAGTCCGGAAGGCATGGACAAAAGGGCACACCAGCAGGACACCTTCCCCGGACGCCACACAGGTAACCACAACTCCCCGCCACTC] [+] EMBL BX618668 [CGAGCTGATGCCGGGCGCGGGAGCGAACGGTAACGAGCTGGGGTCTGAGCTGTCCTAAGAAACGTCTCTGCTCTGCAAAAGCTCACCCAAAGCAAAGTCATTAAGGGAAGGCGTCGTCTGCTAGTGGCTTGAACGTGGTTAGACTGGAGTCCGGAAGGCATGGACAAAAGGGCACACCAGCAGGACACCTTCCCCGGACGCCACACAGGTAACCACAACTCCCCGCCACTC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1559#0 CCGGCAAGCTGATGGAGGATCTGGCGAGCGTCGATCAGAACGATCCCCAGCAGCAACTGA 60 consensus_1559#1 ------------------------------------------------------------ consensus_1559#0 TCGGAGGAGATCAGGAGAACAGCTTCCCGCTGGAGTGGTTTGCGAACGAAATGTCCACCA 120 consensus_1559#1 ------------------------------------------------------------ consensus_1559#0 ATCCGACCCTGGCCAAATCGATTCTGCAACGTTTCGTCGACACCAATCGCGACGGGCTGC 180 consensus_1559#1 ------------------------------------------------------------ consensus_1559#0 TGGAAACGGGCGAGCTGATGCCGGGCGCGGGAGCGAACGGTAACGAGCTTGGGTCTGAGC 240 consensus_1559#1 ----------CGAGCTGATGCCGGGCGCGGGAGCGAACGGTAACGAGCTGGGGTCTGAGC 50 *************************************** ********** consensus_1559#0 TGTTCTAAGAAACGTCTCTTCTCTTCAAAAGCTCACCCAAAGCAAAGTCATTAAGGGATG 300 consensus_1559#1 TGTCCTAAGAAACGTCTCTGCTCTGCAAAAGCTCACCCAAAGCAAAGTCATTAAGGGAAG 110 *** *************** **** ********************************* * consensus_1559#0 GCGTCGTCTGCTAGTGGCTTGAACGTGTTTAGACTGGAGTCTGGATGGCATGGACAAAAG 360 consensus_1559#1 GCGTCGTCTGCTAGTGGCTTGAACGTGGTTAGACTGGAGTCCGGAAGGCATGGACAAAAG 170 *************************** ************* *** ************** consensus_1559#0 GGCACACCAGCAGGACACTTTCTCTGGACGCTACACAGTTATCTACATCTCTCCGCCACT 420 consensus_1559#1 GGCACACCAGCAGGACACCTTCCCCGGACGCCACACAGGTAACCACAACTCCCCGCCACT 230 ****************** *** * ****** ****** ** * *** *** ******** consensus_1559#0 CAACCATCGATTCCTGCACAAGCAACCCGTTTCTTTCAAATCCAAATGAGGCTGGCATTA 480 consensus_1559#1 C----------------------------------------------------------- 231 * consensus_1559#0 CTCGAATTTCCCCCCGATCTACAACTATATAAACATCCATTTGATTTATTGCAAACAAAA 540 consensus_1559#1 ------------------------------------------------------------ consensus_1559#0 AAACTCCAAGAGCATATAAAATATACACGAATCTTTGAAAAAGATTAAAATCAAATGATC 600 consensus_1559#1 ------------------------------------------------------------ consensus_1559#0 CTCCTCATCTCCTTCTCTCTCTCTTACACTCCTAGAGGTAAAGCAACAGAGCGGCGTTTT 660 consensus_1559#1 ------------------------------------------------------------ consensus_1559#0 CCCCGCAGTTGTCTTGTTTGATTCTTTCGTTTGTACAAAGAC 702 consensus_1559#1 ------------------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||