These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1636#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 616 fasta sequence [GCAACTACTCCTTCCCGGAACCTGGCGAGCAACGAAGAGGAGCACCGTCAGTCTTCTGCCCTGTCCGAGCATTTGGTGCACCATTTTTTGCACACTTTCGAAACGAGCATGGATCCGGTAATTGAAGACTTGGATGCCCATCTGCCCGATCAGCATCCAGCGTCGGGCATGTTTTCGTTTCCGAGCGACGCGCTTGCCAGCATGACGACGGCGGCGGCAAGCGCACCCTACCGGCAGACGGCGAAAGCACCGCACGATGCGGGCGGCGCACCGATGCGGCGGGGTCGCTCCCGGGGCGGCCGCTCCCAGTCGCGCGGCCGTCGCATGGCAATGAAGGCAGCCCAGGAGCAGCAGCAGCACGAACAGCCGTCGAGCCCGTCGCCGGCGCGCCGAGGACGCAGGAGCCGCTCCCGGTCGGCCGCGGCGTCGCACAAGCCCGCCCGCAGCCAGTCGAGGCGCCGGAGCCGCAGCCGGGCCCGCTCTCGGTCCCGGTCCCGCCCCGCCCGCAAGCGGTCGCAGAGNGGTGGCCGTCGTACCAGCCGCTCCCGCCGTCGCTAGGTGTCGCTGGATGGAAGAATTCGCAACAACGACAACAACGGTTTCGCGGGTACGCTCT] [+] EMBL BX623065 [GCAACTACTCCTTCCCGGAACCTGGCGAGCAACGAAGAGGAGCACCGTCAGTCTTCTGCCCTGTCCGAGCATTTGGTGCACCATTTTTTGCACACTTTCGAAACGAGCATGGATCCGGTAATTGAAGACTTGGATGCCCATCTGCCCGATCAGCATCCAGCGTCGGGCATGTTTTCGTTTCCGAGCGACGCGCTTGCCAGCATGACGACGGCGGCGGCAAGCGCACCCTACCGGCAGACGGCGAAAGCACCGCACGATGCGGGCGGCGCACCGATGCGGCGGGGTCGCTCCCGGGGCGGCCGCTCCCAGTCGCGCGGCCGTCGCATGGCAATGAAGGCAGCCCAGGAGCAGCAGCAGCACGAACAGCCGTCGAGCCCGTCGCCGGCGCGCCGAGGACGCAGGAGCCGCTCCCGGTCGGCCGCGGCGTCGCACAAGCCCGCCCGCAGCCAGTCGAGGCGCCGGAGCCGCAGCCGGGCCCGCTCTCGGTCCCGGTCCCGCCCCGCCCGCAAGCGGTCGCAGAGNGGTGGCCGTCGTACCAGCCGCTCCCGCCGTCGCTAGGTGTCGCTGGATGGAAGAATTCGCAACAACGACAACAACGGTTTCGCGGGTACGCTCT] consensusID : consensus_1636#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 349 fasta sequence [GCAAGACTCGCCACGAGGTGAAATTGTCTACGGTTCGTGCACTTCACAGTGCAACTACTCCTTCCCGGAACCTGGCTGAGCAACGAAGAGGAGCACCGGTCAGTCTTCTGCCCTGTCCGAGCATNTGGTGCACCAGTTTTTTGCACACTTTCGAAACGAGCATGGATCCGGTAAGTTGAAGATTTGGATGCCCATCGTGCCCGATCAGCGACGAAGCGTCGGGCATGTATTAGTCGTTATCCGAGCGACGCGCGTTGCCGGCATGACGACGGCAGGCGGCAAGCGCACCCTACCGGCAGACGGCAAAAGCACCGGACGAGTGCGGGCGGCGCACCGATGACGGCGGGGG] [+] EMBL BX469200 [GCAAGACTCGCCACGAGGTGAAATTGTCTACGGTTCGTGCACTTCACAGTGCAACTACTCCTTCCCGGAACCTGGCTGAGCAACGAAGAGGAGCACCGGTCAGTCTTCTGCCCTGTCCGAGCATNTGGTGCACCAGTTTTTTGCACACTTTCGAAACGAGCATGGATCCGGTAAGTTGAAGATTTGGATGCCCATCGTGCCCGATCAGCGACGAAGCGTCGGGCATGTATTAGTCGTTATCCGAGCGACGCGCGTTGCCGGCATGACGACGGCAGGCGGCAAGCGCACCCTACCGGCAGACGGCAAAAGCACCGGACGAGTGCGGGCGGCGCACCGATGACGGCGGGGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1636#0 --------------------------------------------------GCAACTACTC 10 consensus_1636#1 GCAAGACTCGCCACGAGGTGAAATTGTCTACGGTTCGTGCACTTCACAGTGCAACTACTC 60 ********** consensus_1636#0 CTTCCCGGAACCTGGC-GAGCAACGAAGAGGAGCACCG-TCAGTCTTCTGCCCTGTCCGA 68 consensus_1636#1 CTTCCCGGAACCTGGCTGAGCAACGAAGAGGAGCACCGGTCAGTCTTCTGCCCTGTCCGA 120 **************** ********************* ********************* consensus_1636#0 GCATTTGGTGCACCA-TTTTTTGCACACTTTCGAAACGAGCATGGATCCGGTAA-TTGAA 126 consensus_1636#1 GCATNTGGTGCACCAGTTTTTTGCACACTTTCGAAACGAGCATGGATCCGGTAAGTTGAA 180 **** ********** ************************************** ***** consensus_1636#0 GACTTGGATGCCCATC-TGCCCGATCAGCATCCA-GCGTCGGGCATGTTTTCGTT----T 180 consensus_1636#1 GATTTGGATGCCCATCGTGCCCGATCAGCGACGAAGCGTCGGGCATGTATTAGTCGTTAT 240 ** ************* ************ * * ************* ** ** * consensus_1636#0 CCGAGCGACGCGC-TTGCCAGCATGACGACGGC-GGCGGCAAGCGCACCCTACCGGCAGA 238 consensus_1636#1 CCGAGCGACGCGCGTTGCCGGCATGACGACGGCAGGCGGCAAGCGCACCCTACCGGCAGA 300 ************* ***** ************* ************************** consensus_1636#0 CGGCGAAAGCACCGCACGA-TGCGGGCGGCGCACCGATG-CGGCGGGGTCGCTCCCGGGG 296 consensus_1636#1 CGGCAAAAGCACCGGACGAGTGCGGGCGGCGCACCGATGACGGCGGGGG----------- 349 **** ********* **** ******************* ******** consensus_1636#0 CGGCCGCTCCCAGTCGCGCGGCCGTCGCATGGCAATGAAGGCAGCCCAGGAGCAGCAGCA 356 consensus_1636#1 ------------------------------------------------------------ consensus_1636#0 GCACGAACAGCCGTCGAGCCCGTCGCCGGCGCGCCGAGGACGCAGGAGCCGCTCCCGGTC 416 consensus_1636#1 ------------------------------------------------------------ consensus_1636#0 GGCCGCGGCGTCGCACAAGCCCGCCCGCAGCCAGTCGAGGCGCCGGAGCCGCAGCCGGGC 476 consensus_1636#1 ------------------------------------------------------------ consensus_1636#0 CCGCTCTCGGTCCCGGTCCCGCCCCGCCCGCAAGCGGTCGCAGAGNGGTGGCCGTCGTAC 536 consensus_1636#1 ------------------------------------------------------------ consensus_1636#0 CAGCCGCTCCCGCCGTCGCTAGGTGTCGCTGGATGGAAGAATTCGCAACAACGACAACAA 596 consensus_1636#1 ------------------------------------------------------------ consensus_1636#0 CGGTTTCGCGGGTACGCTCT 616 consensus_1636#1 -------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||