These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_168#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 757 fasta sequence [TTCAATTTGCGCGCACAATGCTGGTGCCTCTCGGGAAAAGTGTGCGTATGATTAGTTCGGAATCGGTCAATCATAAGCAAAGCGATATGCTGTGTGTATGTGTTAATGTGAGTGTTTGTGTGTCCAATGTCAGCGTGAAGATGTTGCTGTGTTCCACATTGTTCACCAAATCGACGCTCGGTGCAAGTGCACAGCAGCGCACATCACACAGCGCCAGCTCCAGACACAACACACTCTGCCCTTTAACCCATTTGACATTCCTAGAAACGCACTTGAACTCACACCACACACACATATTTACAAATTTAATCTTATCTTGTCGAGCATATCGTGCTGTCGCAGGACAGACAACACAATGTTTGAGGCCATTATGCGCGCGGGAAGGAAATTAATAACGTAAAAGCTGTTTACCATAATCGACTAGCAAATGAGCTTCTTGCAGATGATGATGCTGTTGTCAATAATGGTTGGAAAAGTTCGGCCAGGAACTCGGTGAGTTGATCCAGCACTTGGAAAAGCCAGTTGGTTTCGTAGGCGAACAAACTCCGTCGAGGGAGGTAGTCGTCGCGGTTATCCCTTTCTCTCTACTGTTGGTATTGACCACACGCACACACCTACGAGCTTCTGTGAAAATGAGACACAAACACACGCGCGCGCAAGAGGCAGATGGGTGATGATAAAGCAAAACAGGCAAAAATACATCGATCCCCCGTAGGTGGGAACGGGATGAATTATATATTGAATTATAGAGACCACA] [+] EMBL BX618350 [TTCAATTTGCGCGCACAATGCTGGTGCCTCTCGGGAAAAGTGTGCGTATGATTAGTTCGGAATCGGTCAATCATAAGCAAAGCGATATGCTGTGTGTATGTGTTAATGTGAGTGTTTGTGTGTCCAATGTCAGCGTGAAGATGTTGCTGTGTTCCACATTGTTCACCAAATCGACGCTCGGTGCAAGTGCACAGCAGCGCACATCACACAGCGCCAGCTCCAGACACAACACACTCTGCCCTTTAACCCATTTGACATTCCTAGAAACGCACTTGAACTCACACCACACACACATATTTACAAATTTAATCTTATCTTGTCGAGCATATCGTGCTGTCGCAGGACAGACAACACAATGTTTGAGGCCATTATGCGCGCGGGAAGGAAATTAATAACGTAAAAGCTGTTTACCATAATCGACTAGCAAATGAGCTTCTTGCAGATGATGATGCTGTTGTCAATAATGGTTGGAAAAGTTCGGCCAGGAACTCGGTGAGTTGATCCAGCACTTGGAAAAGCCAGTTGGTTTCGTAGGCGAACAAACTCCGTCGAGGGAGGTAGTCGTCGCGGTTATCCCTTTCTCTCTACTGTTGGTATTGACCACACGCACACACCTACGAGCTTCTGTGAAAATGAGACACAAACACACGCGCGCGCAAGAGGCAGATGGGTGATGATAAAGCAAAACAGGCAAAAATACATCGATCCCCCGTAGGTGGGAACGGGATGAATTATATATTGAATTATAGAGACCACA] consensusID : consensus_168#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 189 fasta sequence [CGACCCACGCGTCCGAACCGCTACGAACGACTGTTCCTTTCCGGTAATCGGGTACCTCTGTACAACTTCCATCCTCGATCAAGGGCGCAGTGGATAGCTGCGTTGTTTGAACTGTAACTTCGACATTGCTATGATGCTCGCTTCCGCCGTACGTAATTTGTCCCGTCGGTCATTCTCGACCTCCAAAGC] [+] EMBL BM621009 [CGACCCACGCGTCCGAACCGCTACGAACGACTGTTCCTTTCCGGTAATCGGGTACCTCTGTACAACTTCCATCCTCGATCAAGGGCGCAGTGGATAGCTGCGTTGTTTGAACTGTAACTTCGACATTGCTATGATGCTCGCTTCCGCCGTACGTAATTTGTCCCGTCGGTCATTCTCGACCTCCAAAGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_168#0 TTCAATTTGCGCGCACAATGCTGGTGCCTCTCGGGAAAAGTGTGCGTATGATTAGTTCGG 60 consensus_168#1 ------------------------------------------------------------ consensus_168#0 AATCGGTCAATCATAAGCAAAGCGATATGCTGTGTGTATGTGTTAATGTGAGTGTTTGTG 120 consensus_168#1 ------------------------------------------------------------ consensus_168#0 TGTCCAATGTCAGCGTGAAGATGTTGCTGTGTTCCACATTGTTCACCAAATCGACGCTCG 180 consensus_168#1 ------------------------------------------------------------ consensus_168#0 GTGCAAGTGCACAGCAGCGCACATCACACAGCGCCAGCTCCAGACACAACACACTCTGCC 240 consensus_168#1 ------------------------------------------------------------ consensus_168#0 CTTTAACCCATTTGACATTCCTAGAAACGCACTTGAACTCACACCACACACACATATTTA 300 consensus_168#1 ------------------------------------------------------------ consensus_168#0 CAAATTTAATCTTATCTTGTCGAGCATATCGTGCTGTCGCAGGACAGACAACACAATGTT 360 consensus_168#1 ------------------------------------------------------------ consensus_168#0 TGAGGCCATTATGCGCGCGGGAAGGAAATTAATAACGTAAAAGCTGTTTACCATAATCGA 420 consensus_168#1 ---------------------------------------CGACCCACGCGTCCGAACCGC 21 * * * ** ** consensus_168#0 CTAGCAAATGAGCTTCTTGCAGATGATGATGCTGTTGTCAATAATGGTTGGAAAAGTTCG 480 consensus_168#1 TACGAACGACTGTTCCTTTCCGGTAATCGGGTACCTCTGTACAACTTCC----ATCCTCG 77 * * * * *** * * * ** * * * * ** * *** consensus_168#0 GCCAGGAACTCGGTGAGTTGATCCAGCACTTGGAAAAGCCAGTTGGTTTCG-TAGGCGAA 539 consensus_168#1 ATCAAGGGCGCAGTGGATAGCTGCGTTGTTTGAACTGTAACTTCGACATTGCTATGATGC 137 ** * * * *** * * * * *** * * * * * ** * consensus_168#0 CAAACTCCGTCG-AGGGAGGTAGTCGTCGCGGTTATCCCTTTCTCTCTACTGTTGGTATT 598 consensus_168#1 TCGCTTCCGCCGTACGTAATTTGTCCCGTCGGTCATTC-TCGACCTCCAAAGC------- 189 **** ** * * * * *** **** ** * * *** * * consensus_168#0 GACCACACGCACACACCTACGAGCTTCTGTGAAAATGAGACACAAACACACGCGCGCGCA 658 consensus_168#1 ------------------------------------------------------------ consensus_168#0 AGAGGCAGATGGGTGATGATAAAGCAAAACAGGCAAAAATACATCGATCCCCCGTAGGTG 718 consensus_168#1 ------------------------------------------------------------ consensus_168#0 GGAACGGGATGAATTATATATTGAATTATAGAGACCACA 757 consensus_168#1 --------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||