These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1684#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 585 fasta sequence [ACCCGTGCAGCCAGTTTGGCCAGTTTGGCCAGTTTGAGTGAGCGTCGAGGTCAGCAGGTAGCAGCAGCCAAGCAGTGCGCGTTTGCCCTCGCGTTTTGTGTCCTCCGTGTGTGAATCCTTTTTTCAGTTTCGGTTTTTCCGTTTTTTAATCTTGCGAGCTGCCCGTTACTTGCGCCCGTCCGCTGTCCGCGAAAGTGTGAGTGGGTGGGTGTGTGGGTGGGTGTGCGGGAGTGCGTGTGTGTGTGTGTGTACGTGTGCCCATGGCTGAGCTGTACGTGTGACGAGTCGCTGGTCTGCTCGGGGACTTTTCCCATTACAAGAGACAGGGACTTTTTTTTCTTTGCTCGTGCGATGGCGGTGATGGAGAAAATGCTGCGAAGGAATCGATCGATCCGAAACAAGTTGCTGCTTAGAAGGTGGATTCTGTGAAGTGAAATTGCTGGAACGCGTACTGTGTGAGCCTGCTAGCGCCGTGAAGAAAAGTGCCAATGGTGGAAGTGTTGTTACAGCACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCGGCAGCTCGAGTCGTCGGTGTCAGTGTCGGTGCGGT] [+] EMBL BX610191 [ACCCGTGCAGCCAGTTTGGCCAGTTTGGCCAGTTTGAGTGAGCGTCGAGGTCAGCAGGTAGCAGCAGCCAAGCAGTGCGCGTTTGCCCTCGCGTTTTGTGTCCTCCGTGTGTGAATCCTTTTTTCAGTTTCGGTTTTTCCGTTTTTTAATCTTGCGAGCTGCCCGTTACTTGCGCCCGTCCGCTGTCCGCGAAAGTGTGAGTGGGTGGGTGTGTGGGTGGGTGTGCGGGAGTGCGTGTGTGTGTGTGTGTACGTGTGCCCATGGCTGAGCTGTACGTGTGACGAGTCGCTGGTCTGCTCGGGGACTTTTCCCATTACAAGAGACAGGGACTTTTTTTTCTTTGCTCGTGCGATGGCGGTGATGGAGAAAATGCTGCGAAGGAATCGATCGATCCGAAACAAGTTGCTGCTTAGAAGGTGGATTCTGTGAAGTGAAATTGCTGGAACGCGTACTGTGTGAGCCTGCTAGCGCCGTGAAGAAAAGTGCCAATGGTGGAAGTGTTGTTACAGCACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCGGCAGCTCGAGTCGTCGGTGTCAGTGTCGGTGCGGT] consensusID : consensus_1684#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 442 fasta sequence [CCGGAAATTGGAAAAGTCACCCGTGCAGCCAGTTTGGCCAGTTTGGCCAGTTTGAGTGAGCGTCGAGGTCAGCAGTGCCAATGGTGGAAGTGTTGTTACAGCACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCGGCAGCTCGAGTCGTCGGTGTCAGTGTCGGTGCGGTCGTGGAGCAGTGTCGCTAGTGTGGCGTTTGTCGCCCGCGGTGTCCGTCTGTGTGGGCCCGTGAGCCCGGTTTCGGTGGTGGTGCAGGGTGCGTGCGCGCGTGACCGTTGCGGCCACTAAGAGCGTGAAAAGAGCGTGTAAGAAAGGGAAGCAAGCAGGGCAAACGGCACCGCGCGGAGCGAAAGTAGCAAGAGAAAAGAAAAAGGAAGCAAGCGAGCAAGGTTGTAGAAGCGAGCGAGCGAAGAAGAAAAAGAAAAGAGGGTGCA] [+] EMBL BM634492 [CCGGAAATTGGAAAAGTCACCCGTGCAGCCAGTTTGGCCAGTTTGGCCAGTTTGAGTGAGCGTCGAGGTCAGCAGTGCCAATGGTGGAAGTGTTGTTACAGCACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCGGCAGCTCGAGTCGTCGGTGTCAGTGTCGGTGCGGTCGTGGAGCAGTGTCGCTAGTGTGGCGTTTGTCGCCCGCGGTGTCCGTCTGTGTGGGCCCGTGAGCCCGGTTTCGGTGGTGGTGCAGGGTGCGTGCGCGCGTGACCGTTGCGGCCACTAAGAGCGTGAAAAGAGCGTGTAAGAAAGGGAAGCAAGCAGGGCAAACGGCACCGCGCGGAGCGAAAGTAGCAAGAGAAAAGAAAAAGGAAGCAAGCGAGCAAGGTTGTAGAAGCGAGCGAGCGAAGAAGAAAAAGAAAAGAGGGTGCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1684#0 ------------------ACCCGTGCAGCCAGTTTGGCCAGTTTGGCCAGTTTGAGTGAG 42 consensus_1684#1 CCGGAAATTGGAAAAGTCACCCGTGCAGCCAGTTTGGCCAGTTTGGCCAGTTTGAGTGAG 60 ****************************************** consensus_1684#0 CGTCGAGGTCAGCAGGTAGCAGCAGCCAAGCAGTGCGCGTTTGCCCTCGCGTTTTGTGTC 102 consensus_1684#1 CGTCGAGGTCAGCAG-TGCCAATGGT--GGAAGTG-----TTGTTACAGCACCA-GCAGC 111 *************** * ** * * **** *** ** * * consensus_1684#0 CTCCGTGTGTGAATCCTTTTTTCAGTTTCGGTTTTTCCGTTTTTTAATCTTGCGAGCTGC 162 consensus_1684#1 AGCAGCAGCAGCAGC--------AGCAGCAGCAGCGGCGGCAGCT-------CGAGTCGT 156 * * * * * ** * * ** * **** * consensus_1684#0 CCGTTACTTGCGCCCGTCCGCTGTCCGCGAAAGTGTGAGTGGGTGGGTGTGTGGGTGGGT 222 consensus_1684#1 C-GGTGTCAGTGTCGGTGCGGT---CGTGGAGCAGTGTC---GCTAGTGTGGCGTTTGTC 209 * * * * * * ** ** * ** * * *** * ***** * * * consensus_1684#0 GTGCGGGAGTGCGTGTGTGTGTGTGTGTACGTGTGCCCATGGCTGAGCTGTACGTGTGAC 282 consensus_1684#1 GCCCGCG---GTGTCCGTCTGTGTGGGCCCGTGAGCCC--GGTTTCGGTG---GTGGTGC 261 * ** * * ** ** ****** * **** **** ** * * ** *** * consensus_1684#0 GAGTCGCTGGTCTGCTCGGGGACTTTTCCCATTACAAGAGACAGGGACTTTTTTTTCTTT 342 consensus_1684#1 AGGGTGCGTGCGCGC---GTGACCGTTGCGGCCACTAAGAGCGTGAAAA----------- 307 * ** * ** * *** ** * ** * * * * consensus_1684#0 GCTCGTGCGATGGCGGTGATGGAGAAAATGCTGCGAA-GGAATCGATCGATCCGAAACAA 401 consensus_1684#1 GAGCGTGTAAGAAAGG----GAAGCAAGCAGGGCAAACGGCACCGCGCGGAGCGAAAGTA 363 * **** * ** * ** ** ** ** ** * ** ** ***** * consensus_1684#0 GTTGCTGCTTAGAAGGTGGATTCTGTGAAGTGAAATTGCTGGAACGCGTACTGTGTGAGC 461 consensus_1684#1 GCAAGAGAAAAGAAAAAGGAAGCAAGCGAGCAAGGTTGTAGAAGCGAG-------CGAGC 416 * * **** *** * ** * *** * * ** * **** consensus_1684#0 CTGCTAGCGCCGTGAAGAAAAGTGCCAATGGTGGAAGTGTTGTTACAGCACCAGCAGCAG 521 consensus_1684#1 GAAGAAGAAAAAGAAAAGAGGGTGCA---------------------------------- 442 ** ** * **** consensus_1684#0 CAGCAGCAGCAGCAGCAGCAGCAGCGGCGGCAGCTCGAGTCGTCGGTGTCAGTGTCGGTG 581 consensus_1684#1 ------------------------------------------------------------ consensus_1684#0 CGGT 585 consensus_1684#1 ---- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||