cluster # 1755

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Anopheles gambiae
cluster # 1755 cluster # 1755 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1755#0 length = 1482 sequences # 1

consensus_1755#1 length = 721 sequences # 1

consensusID : consensus_1755#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1482
fasta sequence

                              [CCAGAATTGCCCNAGGTGTTAAAGTAAAATCCTATTGTACTGTATCAAAACGGTCTCCTGTTTTCGGTTCTCTATTTAGTGATTAATGCAGTAATATGTACATTTGAAGCAAAGTCGAGGTTTTCAGCTAAGTAAACAAAGTGACAAACGTCCCAAAAACGCAATACTGCAAAAACAAGACAGGACTACAATGGGTGTAACGACACAACACTGGANTTTTCATCCATACTTGAAAAAGTGACACNCNCGGGACTGAAACGCACCCATATTGCCTTGGGGTTGGTTAGCCGACACAGCAAAAGGTGGTTCCAACGCACCAAAAATTTTAGAATTACCCGGGGCAAGCTCCTAAAAGCCTCCGGAACCGAGGGCATTACTTGGGGCNGCATTGATTCCAATTACCCAAGGGGTTGGTTCCANACGCTTGGCCTTGGNACAAAACCCGGGCAAGCATTGGAAACCAAATACGAAGCGGCCTTAAAGGTTTTCCCNAATTTGGAAAACCGGCCTCTACTTNCCGGCGGGACAAGNGCCTTGANATAGTAAANCCTTGGACTTATTGGACAACAGCGTCTAACTNTATCCCCTTATATACCTATTACCGCCAAANTTGGGTCACGGTCTGGCACCAAATTGGGTNTNGCNGNTNNNTGGGTCGGCCCCCTTAACTTACTGGCTAATAGGCCCGGGTTAACTATCCTGGCAACCANAACGTTTCCCTATTATTGGCCCCATTCCTGNCACACTTTGGCACAGCGCCCCACCNNCNTCGCGCNCACANACGGGNACCANTNTCTGGGAACCCCTCTTCAAGCCCACCCCCAAACAGGAACCAGGGCCAACCGGGTTTTGGTGCCCTATCACCNCCACCCGCANAAAAAAAACCGCACCTTTAGCCNCCCCTTACACCGCAAAGCCAANANAACCATAATTATNCCTTCTGGGGTTCGCACCACACAANTTCGGNGCGCCNANTTTAGGGGCGGACTTATCACCTTATACCTTTAAACCAGTATATAACCNNTTTGGGGACAGCANGCAAGACNATTATATGACCCCCCAACACNCCAGTTAATGCGGGACCCAGCAACAACCGGCAACAACNNAACAAGTACGNGCNCTCTTACATGCNGCANAAACACTAGCTCCNGNGCCCNCCAAAAACAGCACATCGGAAACAGNTAAGGGGAGCACCCCAAACAGAAGCTCTAGCGCCCAAAATCTACAGCCTACCATANGGGGGTCCCGGCACGCCCCACTAACAAGGCTACATTCNCTACCAACACCCAANCCGANNCNACANTTACACCNACCCCCCCCCTGAGAACAACCCACCAGGGNGGGCACACACACCACGGCCAAACGACGTNTCAAGGNCACCAACATNGAGCNCAGCCATNGAGCANCAAACAGAACANATCACCCCTGGACAAANCAATAAACGGTGAGGTCNACCNCTGAGACACAACAATAGANAGACGA]

[+] EMBL AL693907             [CCAGAATTGCCCNAGGTGTTAAAGTAAAATCCTATTGTACTGTATCAAAACGGTCTCCTGTTTTCGGTTCTCTATTTAGTGATTAATGCAGTAATATGTACATTTGAAGCAAAGTCGAGGTTTTCAGCTAAGTAAACAAAGTGACAAACGTCCCAAAAACGCAATACTGCAAAAACAAGACAGGACTACAATGGGTGTAACGACACAACACTGGANTTTTCATCCATACTTGAAAAAGTGACACNCNCGGGACTGAAACGCACCCATATTGCCTTGGGGTTGGTTAGCCGACACAGCAAAAGGTGGTTCCAACGCACCAAAAATTTTAGAATTACCCGGGGCAAGCTCCTAAAAGCCTCCGGAACCGAGGGCATTACTTGGGGCNGCATTGATTCCAATTACCCAAGGGGTTGGTTCCANACGCTTGGCCTTGGNACAAAACCCGGGCAAGCATTGGAAACCAAATACGAAGCGGCCTTAAAGGTTTTCCCNAATTTGGAAAACCGGCCTCTACTTNCCGGCGGGACAAGNGCCTTGANATAGTAAANCCTTGGACTTATTGGACAACAGCGTCTAACTNTATCCCCTTATATACCTATTACCGCCAAANTTGGGTCACGGTCTGGCACCAAATTGGGTNTNGCNGNTNNNTGGGTCGGCCCCCTTAACTTACTGGCTAATAGGCCCGGGTTAACTATCCTGGCAACCANAACGTTTCCCTATTATTGGCCCCATTCCTGNCACACTTTGGCACAGCGCCCCACCNNCNTCGCGCNCACANACGGGNACCANTNTCTGGGAACCCCTCTTCAAGCCCACCCCCAAACAGGAACCAGGGCCAACCGGGTTTTGGTGCCCTATCACCNCCACCCGCANAAAAAAAACCGCACCTTTAGCCNCCCCTTACACCGCAAAGCCAANANAACCATAATTATNCCTTCTGGGGTTCGCACCACACAANTTCGGNGCGCCNANTTTAGGGGCGGACTTATCACCTTATACCTTTAAACCAGTATATAACCNNTTTGGGGACAGCANGCAAGACNATTATATGACCCCCCAACACNCCAGTTAATGCGGGACCCAGCAACAACCGGCAACAACNNAACAAGTACGNGCNCTCTTACATGCNGCANAAACACTAGCTCCNGNGCCCNCCAAAAACAGCACATCGGAAACAGNTAAGGGGAGCACCCCAAACAGAAGCTCTAGCGCCCAAAATCTACAGCCTACCATANGGGGGTCCCGGCACGCCCCACTAACAAGGCTACATTCNCTACCAACACCCAANCCGANNCNACANTTACACCNACCCCCCCCCTGAGAACAACCCACCAGGGNGGGCACACACACCACGGCCAAACGACGTNTCAAGGNCACCAACATNGAGCNCAGCCATNGAGCANCAAACAGAACANATCACCCCTGGACAAANCAATAAACGGTGAGGTCNACCNCTGAGACACAACAATAGANAGACGA]




>consensus_1755#0
CCAGAATTGCCCNAGGTGTTAAAGTAAAATCCTATTGTACTGTATCAAAACGGTCTCCTG
TTTTCGGTTCTCTATTTAGTGATTAATGCAGTAATATGTACATTTGAAGCAAAGTCGAGG
TTTTCAGCTAAGTAAACAAAGTGACAAACGTCCCAAAAACGCAATACTGCAAAAACAAGA
CAGGACTACAATGGGTGTAACGACACAACACTGGANTTTTCATCCATACTTGAAAAAGTG
ACACNCNCGGGACTGAAACGCACCCATATTGCCTTGGGGTTGGTTAGCCGACACAGCAAA
AGGTGGTTCCAACGCACCAAAAATTTTAGAATTACCCGGGGCAAGCTCCTAAAAGCCTCC
GGAACCGAGGGCATTACTTGGGGCNGCATTGATTCCAATTACCCAAGGGGTTGGTTCCAN
ACGCTTGGCCTTGGNACAAAACCCGGGCAAGCATTGGAAACCAAATACGAAGCGGCCTTA
AAGGTTTTCCCNAATTTGGAAAACCGGCCTCTACTTNCCGGCGGGACAAGNGCCTTGANA
TAGTAAANCCTTGGACTTATTGGACAACAGCGTCTAACTNTATCCCCTTATATACCTATT
ACCGCCAAANTTGGGTCACGGTCTGGCACCAAATTGGGTNTNGCNGNTNNNTGGGTCGGC
CCCCTTAACTTACTGGCTAATAGGCCCGGGTTAACTATCCTGGCAACCANAACGTTTCCC
TATTATTGGCCCCATTCCTGNCACACTTTGGCACAGCGCCCCACCNNCNTCGCGCNCACA
NACGGGNACCANTNTCTGGGAACCCCTCTTCAAGCCCACCCCCAAACAGGAACCAGGGCC
AACCGGGTTTTGGTGCCCTATCACCNCCACCCGCANAAAAAAAACCGCACCTTTAGCCNC
CCCTTACACCGCAAAGCCAANANAACCATAATTATNCCTTCTGGGGTTCGCACCACACAA
NTTCGGNGCGCCNANTTTAGGGGCGGACTTATCACCTTATACCTTTAAACCAGTATATAA
CCNNTTTGGGGACAGCANGCAAGACNATTATATGACCCCCCAACACNCCAGTTAATGCGG
GACCCAGCAACAACCGGCAACAACNNAACAAGTACGNGCNCTCTTACATGCNGCANAAAC
ACTAGCTCCNGNGCCCNCCAAAAACAGCACATCGGAAACAGNTAAGGGGAGCACCCCAAA
CAGAAGCTCTAGCGCCCAAAATCTACAGCCTACCATANGGGGGTCCCGGCACGCCCCACT
AACAAGGCTACATTCNCTACCAACACCCAANCCGANNCNACANTTACACCNACCCCCCCC
CTGAGAACAACCCACCAGGGNGGGCACACACACCACGGCCAAACGACGTNTCAAGGNCAC
CAACATNGAGCNCAGCCATNGAGCANCAAACAGAACANATCACCCCTGGACAAANCAATA
AACGGTGAGGTCNACCNCTGAGACACAACAATAGANAGACGA

consensusID : consensus_1755#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 721
fasta sequence

                              [TGCTGTATCAAAACGGTCTCCTGTTTTCGGCTCTCTATTTAGTGATTAATGCAGTAATATGTACATTTGAAGCAAAGTCGAGGTTTTCAGCTAAGTAAAAAAGTGACAAACGCCCAAAAACGCAATCCTCTCACGAAGCATTGACAATGTAAGTGTGGTCATTGCGCATGGTAATAGCCTATATTGAGCAGTCTTTAAAGGAAGGAAGAAAGAAAGGAATATTACGCGGCAACGGATGGTAATACAGGTCACCAAATGGGTCAAAACGGTTAAAGGCCAATCGTTGCGATCTGATCGAGACGAAACGTGTAGAAAACAAACGAACCGGCAGTCGTTGAAATGTGATGCATGCATAATATCTAGCTAACCTCGTTCATCGACACCGAGAACAGCGCCGGAAACAACAATTGGTGTGACTTAGTCATCGAGAAGCGCATTTGGAAGCAAAGCAAAGCAGCGCCAAAAGAACATAACAACCAAAGTTTAGTCAAATGGTTGTAACCGCGTAGAATGTAGAACAAATCCGTTAAATATTAGAAATGGCATCGTACCTAGCACACGGTGTGCCTTTGTATGTCTAAACCATTGTATTTCTTAACGCCTTAAGCCTAGTGGTGTGTGCAAACTGGTGCCATAGCAAGCGCGCCCAAAAGACCATGTGTTAGTGTTATAGCGCCATATGTGATCTCTTCCTTTCTGATGGTGGTGGTGGTGGTGGTGG]

[+] EMBL BX626174             [TGCTGTATCAAAACGGTCTCCTGTTTTCGGCTCTCTATTTAGTGATTAATGCAGTAATATGTACATTTGAAGCAAAGTCGAGGTTTTCAGCTAAGTAAAAAAGTGACAAACGCCCAAAAACGCAATCCTCTCACGAAGCATTGACAATGTAAGTGTGGTCATTGCGCATGGTAATAGCCTATATTGAGCAGTCTTTAAAGGAAGGAAGAAAGAAAGGAATATTACGCGGCAACGGATGGTAATACAGGTCACCAAATGGGTCAAAACGGTTAAAGGCCAATCGTTGCGATCTGATCGAGACGAAACGTGTAGAAAACAAACGAACCGGCAGTCGTTGAAATGTGATGCATGCATAATATCTAGCTAACCTCGTTCATCGACACCGAGAACAGCGCCGGAAACAACAATTGGTGTGACTTAGTCATCGAGAAGCGCATTTGGAAGCAAAGCAAAGCAGCGCCAAAAGAACATAACAACCAAAGTTTAGTCAAATGGTTGTAACCGCGTAGAATGTAGAACAAATCCGTTAAATATTAGAAATGGCATCGTACCTAGCACACGGTGTGCCTTTGTATGTCTAAACCATTGTATTTCTTAACGCCTTAAGCCTAGTGGTGTGTGCAAACTGGTGCCATAGCAAGCGCGCCCAAAAGACCATGTGTTAGTGTTATAGCGCCATATGTGATCTCTTCCTTTCTGATGGTGGTGGTGGTGGTGGTGG]




>consensus_1755#1
TGCTGTATCAAAACGGTCTCCTGTTTTCGGCTCTCTATTTAGTGATTAATGCAGTAATAT
GTACATTTGAAGCAAAGTCGAGGTTTTCAGCTAAGTAAAAAAGTGACAAACGCCCAAAAA
CGCAATCCTCTCACGAAGCATTGACAATGTAAGTGTGGTCATTGCGCATGGTAATAGCCT
ATATTGAGCAGTCTTTAAAGGAAGGAAGAAAGAAAGGAATATTACGCGGCAACGGATGGT
AATACAGGTCACCAAATGGGTCAAAACGGTTAAAGGCCAATCGTTGCGATCTGATCGAGA
CGAAACGTGTAGAAAACAAACGAACCGGCAGTCGTTGAAATGTGATGCATGCATAATATC
TAGCTAACCTCGTTCATCGACACCGAGAACAGCGCCGGAAACAACAATTGGTGTGACTTA
GTCATCGAGAAGCGCATTTGGAAGCAAAGCAAAGCAGCGCCAAAAGAACATAACAACCAA
AGTTTAGTCAAATGGTTGTAACCGCGTAGAATGTAGAACAAATCCGTTAAATATTAGAAA
TGGCATCGTACCTAGCACACGGTGTGCCTTTGTATGTCTAAACCATTGTATTTCTTAACG
CCTTAAGCCTAGTGGTGTGTGCAAACTGGTGCCATAGCAAGCGCGCCCAAAAGACCATGT
GTTAGTGTTATAGCGCCATATGTGATCTCTTCCTTTCTGATGGTGGTGGTGGTGGTGGTG
G

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_1755#0      CCAGAATTGCCCNAGGTGTTAAAGTAAAATCCTATTGTACTGTATCAAAACGGTCTCCTG 60
consensus_1755#1      -------------------------------------TGCTGTATCAAAACGGTCTCCTG 23
                                                           * *********************

consensus_1755#0      TTTTCGGTTCTCTATTTAGTGATTAATGCAGTAATATGTACATTTGAAGCAAAGTCGAGG 120
consensus_1755#1      TTTTCGGCTCTCTATTTAGTGATTAATGCAGTAATATGTACATTTGAAGCAAAGTCGAGG 83
                      ******* ****************************************************

consensus_1755#0      TTTTCAGCTAAGTAAACAAAGTGACAAACGTCCCAAAAACGCAATACT---GCAAAAACA 177
consensus_1755#1      TTTTCAGCTAAGTAAA-AAAGTGACAAACG-CCCAAAAACGCAATCCTCTCACGAAGCAT 141
                      **************** ************* ************** **    * **    

consensus_1755#0      AGACAGGACTACAATGGGTGTAACGACACAACACTGGANTTT-TCATCCATACTTGAAA- 235
consensus_1755#1      TGACAATGTAAGTGTGGTCATTGCG-CATGGTAATAGCCTATATTGAGCAGTCTTTAAAG 200
                       ****     *   ***   *  ** **    * * *  * * *    **  *** *** 

consensus_1755#0      -AAGTGACACNCNCGGGACTGAAACGCACCCATATTGCCTTGGGGTTGGTTAGCCGACAC 294
consensus_1755#1      GAAGGAAGAAAGAAAGGAATATTACGCGGCAACGG-ATGGTAATACAGGTCACCAAATGG 259
                       ***  * *      *** *   ****  * *        *      *** * *  *   

consensus_1755#0      AGCAAAAGGTGGTTCCAACGCACCAAAAATTTTAGAATTACCCGGGGCAAGCTCCTAAAA 354
consensus_1755#1      GTCAAAA--CGGTT---AAAGGCCAATCGTTGCGATCTGATCGAGACGAAACGTGTAGAA 314
                        *****   ****   *    ****   **      * * *  *   ** *   ** **

consensus_1755#0      GCCTCCGGAACCGAGGGCATTACTTGGGGCNGCATTGATTCCAATTACCCAAGGGGTTGG 414
consensus_1755#1      AACAAACGAACCG---GCAGTCGTTGAAATGTGATGCATGCATAATATCTA----GCTAA 367
                        *    ******   *** *  ***       **  ** *  * ** * *    * *  

consensus_1755#0      TTCCANACGCTTGGCCTTGGNACAAAACCCGGGCAAGCATTGGAAACCAAATACGAAGCG 474
consensus_1755#1      CCTCGTTCATCGACACCGAGAACAGCGCCGGAAACAACAATTGGTGTGACTTAGTCATCG 427
                         *   *       *   * ***   ** *    * ** * *     *  **   * **

consensus_1755#0      GCCTTAAAGGTTTTCCCNAATTTGGAAAACCGGCCTCTACTTNCCGGCGGGACAAGNGCC 534
consensus_1755#1      AG---AAGCGCATTTGGAAGCAAAGCAAAGCAGCGCCAAAAGAAC------ATAACAACC 478
                           **  *  **    *     * *** * **  * *     *      * **   **

consensus_1755#0      TTGANATAGTAAANCCTTGGACTTATTGGACAACAGCGTCTAACTNTATCCCCTTATATA 594
consensus_1755#1      AAAGTTTAGTCAAA---TGGTTGTAACCGCGTAGAATGTAGAACAAATCCGTTAAATATT 535
                            **** **    ***   **   *   * *  **  ***     *     **** 

consensus_1755#0      CCTATTACCGCCAAANTTGGGTCACGGTCTGGCACCAAATTGGGTNTNGCNGNTNNNTGG 654
consensus_1755#1      AGAAATGGCATCGTACCTAGCACACGGTGTGCCTTTGTAT--GTCTAAACCATTGTATTT 593
                         * *  *  *  *  * *  ****** ** *     **  *      *   *   *  

consensus_1755#0      GTCGGCCCCCTTAACTTACTGGCTAATAGGCCCGGGTTAACTATCCTGGCAACCANAACG 714
consensus_1755#1      CTTAACGCCTTAAGCCTAGTGGTGTGTGCAAACTGGTGCCATAGCAAGCGCGCCCAAAAG 653
                       *   * ** * * * ** ***    *     * ***    ** *  *    **  ** *

consensus_1755#0      TTTCCCTATTATTGGCCCCATTCCTGNCACACTTTGGCACAGCGCCCCACCNNCNTCGCG 774
consensus_1755#1      ACCATGTGTTAGTG-------TTATAGCGCCATATGTGAT----CTCTTCCTTTCTGATG 702
                            * *** **       *  *  * *  * **  *     * *  **    *   *

consensus_1755#0      CNCACANACGGGNACCANTNTCTGGGAACCCCTCTTCAAGCCCACCCCCAAACAGGAACC 834
consensus_1755#1      GTGGTGGT--GGTGGTGGTGG--------------------------------------- 721
                                **      *                                         

consensus_1755#0      AGGGCCAACCGGGTTTTGGTGCCCTATCACCNCCACCCGCANAAAAAAAACCGCACCTTT 894
consensus_1755#1      ------------------------------------------------------------
                                                                                  

consensus_1755#0      AGCCNCCCCTTACACCGCAAAGCCAANANAACCATAATTATNCCTTCTGGGGTTCGCACC 954
consensus_1755#1      ------------------------------------------------------------
                                                                                  

consensus_1755#0      ACACAANTTCGGNGCGCCNANTTTAGGGGCGGACTTATCACCTTATACCTTTAAACCAGT 1014
consensus_1755#1      ------------------------------------------------------------
                                                                                  

consensus_1755#0      ATATAACCNNTTTGGGGACAGCANGCAAGACNATTATATGACCCCCCAACACNCCAGTTA 1074
consensus_1755#1      ------------------------------------------------------------
                                                                                  

consensus_1755#0      ATGCGGGACCCAGCAACAACCGGCAACAACNNAACAAGTACGNGCNCTCTTACATGCNGC 1134
consensus_1755#1      ------------------------------------------------------------
                                                                                  

consensus_1755#0      ANAAACACTAGCTCCNGNGCCCNCCAAAAACAGCACATCGGAAACAGNTAAGGGGAGCAC 1194
consensus_1755#1      ------------------------------------------------------------
                                                                                  

consensus_1755#0      CCCAAACAGAAGCTCTAGCGCCCAAAATCTACAGCCTACCATANGGGGGTCCCGGCACGC 1254
consensus_1755#1      ------------------------------------------------------------
                                                                                  

consensus_1755#0      CCCACTAACAAGGCTACATTCNCTACCAACACCCAANCCGANNCNACANTTACACCNACC 1314
consensus_1755#1      ------------------------------------------------------------
                                                                                  

consensus_1755#0      CCCCCCCTGAGAACAACCCACCAGGGNGGGCACACACACCACGGCCAAACGACGTNTCAA 1374
consensus_1755#1      ------------------------------------------------------------
                                                                                  

consensus_1755#0      GGNCACCAACATNGAGCNCAGCCATNGAGCANCAAACAGAACANATCACCCCTGGACAAA 1434
consensus_1755#1      ------------------------------------------------------------
                                                                                  

consensus_1755#0      NCAATAAACGGTGAGGTCNACCNCTGAGACACAACAATAGANAGACGA 1482
consensus_1755#1      ------------------------------------------------