These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1769#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 639 fasta sequence [GAATCCCNCGAGGTCGCATTGAAGGACTTGACATGAGCGGCAGTTTGAACTATTCGCCTTAATCCCACCATGGGACGCTTCCAGGCGAACCCATCCCCATTTGCCGACTGTCCGACCTGCCTCGCGCAAAGCGTTATTCTACGAGGTACTGGGCTTCTCCATCCGCATTGCGCACACAATAACCGATACGAGCCATATTGTTGTTTTACCACCTTTTTTGTGAAACTGTTTGTTGTTGTTTTCTTCGTCCCCATTGCCCGATTCAGCTTGGCCGGCTCTGGGCTCTGGACCGGGTTGACCATTCAATCCCCGGTTACTAATCCGGTGGCTTAACGGTCTGGAAGGAATCCGATTTTATTGTTTATTTCTTTTTTATGGCTTTTTAAACGGTGCCGTGCTTTCGCTGTGCGAGTTGATGTAGTTTTTTTTTGTTGTGTGGCAAAACGTGTACGAATTGTTGGATTTAATGCTGAGGAAAAGTCACAAGTGAGCCGTTGATGCGGCGTGCCGGTTTTGATCATATTGGTTGAGGGTTGGCTGAATTATTTACTACCCCGCAATGGTGGTGCCAGCGGTGCCAATAAAAACAACCATTACACCTACCTGAAGGAGTTCCGCGTGGAGCAGTGCCCCTCCTTT] [+] EMBL AL932386 [GAATCCCNCGAGGTCGCATTGAAGGACTTGACATGAGCGGCAGTTTGAACTATTCGCCTTAATCCCACCATGGGACGCTTCCAGGCGAACCCATCCCCATTTGCCGACTGTCCGACCTGCCTCGCGCAAAGCGTTATTCTACGAGGTACTGGGCTTCTCCATCCGCATTGCGCACACAATAACCGATACGAGCCATATTGTTGTTTTACCACCTTTTTTGTGAAACTGTTTGTTGTTGTTTTCTTCGTCCCCATTGCCCGATTCAGCTTGGCCGGCTCTGGGCTCTGGACCGGGTTGACCATTCAATCCCCGGTTACTAATCCGGTGGCTTAACGGTCTGGAAGGAATCCGATTTTATTGTTTATTTCTTTTTTATGGCTTTTTAAACGGTGCCGTGCTTTCGCTGTGCGAGTTGATGTAGTTTTTTTTTGTTGTGTGGCAAAACGTGTACGAATTGTTGGATTTAATGCTGAGGAAAAGTCACAAGTGAGCCGTTGATGCGGCGTGCCGGTTTTGATCATATTGGTTGAGGGTTGGCTGAATTATTTACTACCCCGCAATGGTGGTGCCAGCGGTGCCAATAAAAACAACCATTACACCTACCTGAAGGAGTTCCGCGTGGAGCAGTGCCCCTCCTTT] consensusID : consensus_1769#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 417 fasta sequence [CCGCGTCAACCGATCCAACGAAATCTTTGTTTACTACGCAAACGGAGAAGCCCAACCATTACACCTACCTGAAGGAGTTCCGCGTGGAGCAGTGCCCCTCCTTTCTGCAGCACAAGTGCAACCAGCACCGGCCGTTCGTCTGCTTCAACTGGCACTTTATGAACCAGCGGCGGCGGCGCCCGGTCCGGCGGCGCGACGGCTCGTTCAACTACAGCGCGGACAACTACTGCCCGAAGTACGACGAGACGACCGGCATCTGTCCGGACGGGGACGACTGTCCGTTTCTGCACCGGACGGCGGGCGATACCGAGCGGCGCTACCATCTGCGCTACTACAAAACGTGCATGTGCGTGCACGATACGGACGCGCGCGGCTACTGCGTGAAGAACGGGCATCACTGTGCGTTCGCGCACGGCA] [+] EMBL BM595124 [CCGCGTCAACCGATCCAACGAAATCTTTGTTTACTACGCAAACGGAGAAGCCCAACCATTACACCTACCTGAAGGAGTTCCGCGTGGAGCAGTGCCCCTCCTTTCTGCAGCACAAGTGCAACCAGCACCGGCCGTTCGTCTGCTTCAACTGGCACTTTATGAACCAGCGGCGGCGGCGCCCGGTCCGGCGGCGCGACGGCTCGTTCAACTACAGCGCGGACAACTACTGCCCGAAGTACGACGAGACGACCGGCATCTGTCCGGACGGGGACGACTGTCCGTTTCTGCACCGGACGGCGGGCGATACCGAGCGGCGCTACCATCTGCGCTACTACAAAACGTGCATGTGCGTGCACGATACGGACGCGCGCGGCTACTGCGTGAAGAACGGGCATCACTGTGCGTTCGCGCACGGCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1769#0 GAATCCCNCGAGGTCGCATTGAAGGACTTGACATGAGCGGCAGTTTGAACTATTCGCCTT 60 consensus_1769#1 -----------------------------------------------------CCGCGTC 7 *** * consensus_1769#0 AATCCCACCATGGGACGCTTCCAGGCGAACCCATCCCCATTTGCC-GACTGTCCGACCTG 119 consensus_1769#1 AACCGATCCAACGAAATCTTTGTTTACTACGCAAACGGAGAAGCCCAACCATTACACCTA 67 ** * *** * * *** ** ** * * *** ** * **** consensus_1769#0 CCTCGCGCAAAGCGTTATTCTACGAGGTACTGGGCTTCTCCATCCGCATTGCGCACACAA 179 consensus_1769#1 CCTGAAGGAG-------TTCCGCGTGGAGCAGTGCCCCTCCTTTC-TGCAGCACA-AGTG 118 *** * * *** ** ** * * ** **** * * ** ** * consensus_1769#0 TAACCGATACGAGCCATATTGTTGTTTTACCACCTTTTTTGTGAAACTGTTTGTTGTTGT 239 consensus_1769#1 CAACCAGCACCGGCCGTTCGTCTGCTTCAACTGGCACTTTATGAACCAGCG----GCGGC 174 **** ** *** * ** ** * * *** **** * * * * consensus_1769#0 TTTCTTCGTCCCCATTGCCCGATTCAGCTTGGCCGGCTCTGGGCTCTGGACCGGGTTGAC 299 consensus_1769#1 GGCGCCCGGTCCGGCGGCGCGA--CGGCTCGTTCAACTACAG--CGCGGAC---AACTAC 227 ** ** ** *** * *** * * ** * **** ** consensus_1769#0 CATTCAATCCCCGGTTACTAATCCGGTGGCTTAACGGTCTGGAAGGAATCCGATTTTATT 359 consensus_1769#1 TGCCCGAAGTACGACGAGACGACCGGCATCT-----GTCCGGACGGGGACG------ACT 276 * * ** * **** ** *** *** ** * * * consensus_1769#0 GTTTATTTCTTTTTT--ATGGCTTTTTAAACGGTGCCGTGCTTTCGCTGTGCGAGTTGAT 417 consensus_1769#1 GTCCGTTTCTGCACCGGACGGCGGGCGATACCGAGCGGCGCT---ACCATCTGCGCTACT 333 ** ***** * *** * ** * ** * *** * * * * * * consensus_1769#0 GTAGTTTTTTTTTGTTGTGTGGCAAAACGTGTACGAATTGTTGGATTTAATGC-TGAGGA 476 consensus_1769#1 ACAAAACGTGCATGT-GCGTGC----ACG-ATACGGACGCGCGCGGCTACTGCGTGAAGA 387 * * *** * *** *** **** * * ** *** *** ** consensus_1769#0 AAAGTCACAAGTGAGCCGTTGATGCGGCGTGCCGGTTTTGATCATATTGGTTGAGGGTTG 536 consensus_1769#1 ACGGGCATCACTGTGC-GTTCGCGCACGGCA----------------------------- 417 * * ** * ** ** *** ** * consensus_1769#0 GCTGAATTATTTACTACCCCGCAATGGTGGTGCCAGCGGTGCCAATAAAAACAACCATTA 596 consensus_1769#1 ------------------------------------------------------------ consensus_1769#0 CACCTACCTGAAGGAGTTCCGCGTGGAGCAGTGCCCCTCCTTT 639 consensus_1769#1 ------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||