These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1845#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 530 fasta sequence [CAGATCGCAGAGGTAACGTACTCGGTGTACAATCCGACCGTGGGCTACTGTCAGGCACAGGCCCCGATCGCCGCCTTCCTGCTGATGCAGCTGCCCTCCGAGCAGGCGTTCTGGTGCTTCGTCGCTATTTGTGACAAATACCTCGAAAACTACTTCACACCCTGGCTCGAGATGTTGCAGCGCGACGCGGGCATGCTGAACCGGCTGCTAAAGAAAACGTCCCCGGCCGCTTACCGCACCTGCAGAAGCACAACGTCGATCCGCTGCTGTACATGACCGACTGGTTCCTGTGTGCGATGACGCGCACGCTGCCCTGGGACACGCTGCTGCGCGTGTGGGACTGCTTCCTTTGCGAAGGGGTGCGAATCTTTTTCAAGGTAGCACTCGTCATCATCGGAGCCACGCTTGGGCCGCAGAAGGTGCGGTCCCAGTGCAACGGGCTGTGCGAAACGCTGGCGGTGCTGCGCTCACCGCCGAAGAAGTTTCTCGAGGAGGATTTCATCATGCACCACATCTTTCGGCTGAACATC] [+] EMBL AL696929 [CAGATCGCAGAGGTAACGTACTCGGTGTACAATCCGACCGTGGGCTACTGTCAGGCACAGGCCCCGATCGCCGCCTTCCTGCTGATGCAGCTGCCCTCCGAGCAGGCGTTCTGGTGCTTCGTCGCTATTTGTGACAAATACCTCGAAAACTACTTCACACCCTGGCTCGAGATGTTGCAGCGCGACGCGGGCATGCTGAACCGGCTGCTAAAGAAAACGTCCCCGGCCGCTTACCGCACCTGCAGAAGCACAACGTCGATCCGCTGCTGTACATGACCGACTGGTTCCTGTGTGCGATGACGCGCACGCTGCCCTGGGACACGCTGCTGCGCGTGTGGGACTGCTTCCTTTGCGAAGGGGTGCGAATCTTTTTCAAGGTAGCACTCGTCATCATCGGAGCCACGCTTGGGCCGCAGAAGGTGCGGTCCCAGTGCAACGGGCTGTGCGAAACGCTGGCGGTGCTGCGCTCACCGCCGAAGAAGTTTCTCGAGGAGGATTTCATCATGCACCACATCTTTCGGCTGAACATC] consensusID : consensus_1845#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 415 fasta sequence [CCGAGGTTACGACGACAGCCGGGCCAGAAGGAGCTGTTCAACGTGCTGAAAGCGTACTCGGTGTACAATCCGACCGTGGGCTACTGTCAGGCACAGGCCCCGATCGCCGCCTTCCTGCTGATGCAGCTGCCCTCCGAGCAGGCGTTCTGGTGCTTCGTCGCTATTTGTGACAAATACCTCGAAAACTACTTCACACCCGGGCTCGAGATGTTGCAGCGCGACGCGGGCATGCTGAACCGGTGCTAAAGAAAACGTTCCCGGGCCGCTTACCGCACCTGCAGAAGCACAACGTCGATCCGCTGCTGTACATGACCGACTGGTTCCTGTGTGCGATGACGCGCACGCTGCCTGGGACACGCTGCTGCGCGTGTGGGACTGGTTCCTTTGCGAAGGGGTGCGAATCTTTTTCAAGGTA] [+] EMBL AL694386 [CCGAGGTTACGACGACAGCCGGGCCAGAAGGAGCTGTTCAACGTGCTGAAAGCGTACTCGGTGTACAATCCGACCGTGGGCTACTGTCAGGCACAGGCCCCGATCGCCGCCTTCCTGCTGATGCAGCTGCCCTCCGAGCAGGCGTTCTGGTGCTTCGTCGCTATTTGTGACAAATACCTCGAAAACTACTTCACACCCGGGCTCGAGATGTTGCAGCGCGACGCGGGCATGCTGAACCGGTGCTAAAGAAAACGTTCCCGGGCCGCTTACCGCACCTGCAGAAGCACAACGTCGATCCGCTGCTGTACATGACCGACTGGTTCCTGTGTGCGATGACGCGCACGCTGCCTGGGACACGCTGCTGCGCGTGTGGGACTGGTTCCTTTGCGAAGGGGTGCGAATCTTTTTCAAGGTA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1845#0 ------------------------------------CAGATCGCAGAGGTAACGTACTCG 24 consensus_1845#1 CCGAGGTTACGACGACAGCCGGGCCAGAAGGAGCTGTTCAACGTGCTGAAAGCGTACTCG 60 * ** * * ******** consensus_1845#0 GTGTACAATCCGACCGTGGGCTACTGTCAGGCACAGGCCCCGATCGCCGCCTTCCTGCTG 84 consensus_1845#1 GTGTACAATCCGACCGTGGGCTACTGTCAGGCACAGGCCCCGATCGCCGCCTTCCTGCTG 120 ************************************************************ consensus_1845#0 ATGCAGCTGCCCTCCGAGCAGGCGTTCTGGTGCTTCGTCGCTATTTGTGACAAATACCTC 144 consensus_1845#1 ATGCAGCTGCCCTCCGAGCAGGCGTTCTGGTGCTTCGTCGCTATTTGTGACAAATACCTC 180 ************************************************************ consensus_1845#0 GAAAACTACTTCACACCCTGGCTCGAGATGTTGCAGCGCGACGCGGGCATGCTGAACCGG 204 consensus_1845#1 GAAAACTACTTCACACCCGGGCTCGAGATGTTGCAGCGCGACGCGGGCATGCTGAACCGG 240 ****************** ***************************************** consensus_1845#0 CTGCTAAAGAAAACGTCCCCGG-CCGCTTACCGCACCTGCAGAAGCACAACGTCGATCCG 263 consensus_1845#1 -TGCTAAAGAAAACGTTCCCGGGCCGCTTACCGCACCTGCAGAAGCACAACGTCGATCCG 299 *************** ***** ************************************* consensus_1845#0 CTGCTGTACATGACCGACTGGTTCCTGTGTGCGATGACGCGCACGCTGCCCTGGGACACG 323 consensus_1845#1 CTGCTGTACATGACCGACTGGTTCCTGTGTGCGATGACGCGCACGCTGCC-TGGGACACG 358 ************************************************** ********* consensus_1845#0 CTGCTGCGCGTGTGGGACTGCTTCCTTTGCGAAGGGGTGCGAATCTTTTTCAAGGTAGCA 383 consensus_1845#1 CTGCTGCGCGTGTGGGACTGGTTCCTTTGCGAAGGGGTGCGAATCTTTTTCAAGGTA--- 415 ******************** ************************************ consensus_1845#0 CTCGTCATCATCGGAGCCACGCTTGGGCCGCAGAAGGTGCGGTCCCAGTGCAACGGGCTG 443 consensus_1845#1 ------------------------------------------------------------ consensus_1845#0 TGCGAAACGCTGGCGGTGCTGCGCTCACCGCCGAAGAAGTTTCTCGAGGAGGATTTCATC 503 consensus_1845#1 ------------------------------------------------------------ consensus_1845#0 ATGCACCACATCTTTCGGCTGAACATC 530 consensus_1845#1 --------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||