These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1943#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 571 fasta sequence [GATCCCGAGGTTATACGTCACTAAGTGCAGTGCTCGAATCTTCCATTCACGATGGTCGCTAAGCGTTGTTTCCTGGTTGCCGCGTTGGCGGTGGTTGCCTTCGGTGCGGTGGCATACGCCGATTCGGCCAAGGAGGAATCGGCCATGATCAACCTGATCAATGAGATCGACAACGAGCCCCGGTTCCCGCTGTTCGGTGGGCTCGCCGTGGAGCGATCGAACGACTACGAGGTCCGTGCCTACGGCGCCCGCTCGAACGAGGACCTTGCCGAACGGGCGGTCCGCTACCTTGCCTCGCACACGCTCAAGTTCAGCGTTCCGTCCGAGGAGAACACCGTTGAAGAAGCTCGCAGCAGCCGCCTGAAGAAGATGCTGTTGCCTCTGCTGCTGGCAATGAAGCTGAAGATGGCCGTCGTGCTGCCCATCCTGTTGGCCATCGTTAAGTTCATCTCGCTGAAGGGCCTGATCGCCGGTCTGATGGCTCTCAAGTTCTCCATCTTCACCGTGCTGAACGGATCTGTTCCAGAAGAAGCAGGAGCGCGTGACCACCGCTTACATCACTAGCGCCCAG] [+] EMBL AL694832 [GATCCCGAGGTTATACGTCACTAAGTGCAGTGCTCGAATCTTCCATTCACGATGGTCGCTAAGCGTTGTTTCCTGGTTGCCGCGTTGGCGGTGGTTGCCTTCGGTGCGGTGGCATACGCCGATTCGGCCAAGGAGGAATCGGCCATGATCAACCTGATCAATGAGATCGACAACGAGCCCCGGTTCCCGCTGTTCGGTGGGCTCGCCGTGGAGCGATCGAACGACTACGAGGTCCGTGCCTACGGCGCCCGCTCGAACGAGGACCTTGCCGAACGGGCGGTCCGCTACCTTGCCTCGCACACGCTCAAGTTCAGCGTTCCGTCCGAGGAGAACACCGTTGAAGAAGCTCGCAGCAGCCGCCTGAAGAAGATGCTGTTGCCTCTGCTGCTGGCAATGAAGCTGAAGATGGCCGTCGTGCTGCCCATCCTGTTGGCCATCGTTAAGTTCATCTCGCTGAAGGGCCTGATCGCCGGTCTGATGGCTCTCAAGTTCTCCATCTTCACCGTGCTGAACGGATCTGTTCCAGAAGAAGCAGGAGCGCGTGACCACCGCTTACATCACTAGCGCCCAG] consensusID : consensus_1943#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 187 fasta sequence [AAGTGTTGTTCTCCGTACCGTCCACTAAGTGCAGTGCTCGAATCCTTCCATTCACGATGGTCGCTAAGCGTTGTTTCCTGGTTGCCGCGTTGGCGGTGGTTGCCTTCGGTGCGGTGGCATACGCCGATTCGGCCAAGGANGAATCGGCCATGATCAACCTGATCAATGAGATCGACAACGAGCCCCC] [+] EMBL BX628701 [AAGTGTTGTTCTCCGTACCGTCCACTAAGTGCAGTGCTCGAATCCTTCCATTCACGATGGTCGCTAAGCGTTGTTTCCTGGTTGCCGCGTTGGCGGTGGTTGCCTTCGGTGCGGTGGCATACGCCGATTCGGCCAAGGANGAATCGGCCATGATCAACCTGATCAATGAGATCGACAACGAGCCCCC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1943#0 ----GATCCCGAGGTTATACGTCACTAAGTGCAGTGCTCGAATC-TTCCATTCACGATGG 55 consensus_1943#1 AAGTGTTGTTCTCCGTACCGTCCACTAAGTGCAGTGCTCGAATCCTTCCATTCACGATGG 60 * * ** ********************** *************** consensus_1943#0 TCGCTAAGCGTTGTTTCCTGGTTGCCGCGTTGGCGGTGGTTGCCTTCGGTGCGGTGGCAT 115 consensus_1943#1 TCGCTAAGCGTTGTTTCCTGGTTGCCGCGTTGGCGGTGGTTGCCTTCGGTGCGGTGGCAT 120 ************************************************************ consensus_1943#0 ACGCCGATTCGGCCAAGGAGGAATCGGCCATGATCAACCTGATCAATGAGATCGACAACG 175 consensus_1943#1 ACGCCGATTCGGCCAAGGANGAATCGGCCATGATCAACCTGATCAATGAGATCGACAACG 180 ******************* **************************************** consensus_1943#0 AGCCCCGGTTCCCGCTGTTCGGTGGGCTCGCCGTGGAGCGATCGAACGACTACGAGGTCC 235 consensus_1943#1 AGCCCCC----------------------------------------------------- 187 ****** consensus_1943#0 GTGCCTACGGCGCCCGCTCGAACGAGGACCTTGCCGAACGGGCGGTCCGCTACCTTGCCT 295 consensus_1943#1 ------------------------------------------------------------ consensus_1943#0 CGCACACGCTCAAGTTCAGCGTTCCGTCCGAGGAGAACACCGTTGAAGAAGCTCGCAGCA 355 consensus_1943#1 ------------------------------------------------------------ consensus_1943#0 GCCGCCTGAAGAAGATGCTGTTGCCTCTGCTGCTGGCAATGAAGCTGAAGATGGCCGTCG 415 consensus_1943#1 ------------------------------------------------------------ consensus_1943#0 TGCTGCCCATCCTGTTGGCCATCGTTAAGTTCATCTCGCTGAAGGGCCTGATCGCCGGTC 475 consensus_1943#1 ------------------------------------------------------------ consensus_1943#0 TGATGGCTCTCAAGTTCTCCATCTTCACCGTGCTGAACGGATCTGTTCCAGAAGAAGCAG 535 consensus_1943#1 ------------------------------------------------------------ consensus_1943#0 GAGCGCGTGACCACCGCTTACATCACTAGCGCCCAG 571 consensus_1943#1 ------------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||