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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1958#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 706 fasta sequence
[GACCCACGCGTCCGACGAGGCCCACAACAGCAGCACGGATCTTGTGCTTTAACGTGTGCTGGGAATGAGATTAAGATTTACGTGTGCGTGTAGTACTTGCCTGGCGAGCAAGAAGATATGAGATACCCGCTCATTCAGTTACAAAATTAGTGTGATCGTGTGTGTTTTATGTGATTGTGCAGTGATGATTGTCCAATTAACGTAAAGATAGCAGATTTAAGAATTTTATCAAAAGGAGTGCTTCAAAAATATATATTTGATCTCCCAAACCTTAGCACCAACGCTTCCTCGACCAACCAATACCGACAGCCCGAGAACGATCGTACCCGAGTGGAAAACACATTGTATTTTCGCAGCAAAAACAACACAGAAATCTTTAAATATTTTAAGATAAACTCCATGTCCCGACAAATCTGCTTTTTTGCGATTACATAGTAAAGAAACACAGTAGTGAGGAGCTTACTTTTGCTCGTGCTCGTACCACCTTTTAAAAAAACCCGGAGGGACAATGCCGCAACGCACCACGGCCAACGATTTGCGCGAGCTCGATGTAGCGCCGGCAAGTGTAACGTTTGATCAAGCTTCCAGATGTTGAGAGTCGAAGTCACAATACGTCCACAACTGTCGGTTCGTCCAATCTGTACATTGTGTGGTCGGTGTTTGGTGGGGAATGACAACGGTGTGTCCTCTTCGAAGGTGCTAAAAG]
[+] EMBL BM603046 [GACCCACGCGTCCGACGAGGCCCACAACAGCAGCACGGATCTTGTGCTTTAACGTGTGCTGGGAATGAGATTAAGATTTACGTGTGCGTGTAGTACTTGCCTGGCGAGCAAGAAGATATGAGATACCCGCTCATTCAGTTACAAAATTAGTGTGATCGTGTGTGTTTTATGTGATTGTGCAGTGATGATTGTCCAATTAACGTAAAGATAGCAGATTTAAGAATTTTATCAAAAGGAGTGCTTCAAAAATATATATTTGATCTCCCAAACCTTAGCACCAACGCTTCCTCGACCAACCAATACCGACAGCCCGAGAACGATCGTACCCGAGTGGAAAACACATTGTATTTTCGCAGCAAAAACAACACAGAAATCTTTAAATATTTTAAGATAAACTCCATGTCCCGACAAATCTGCTTTTTTGCGATTACATAGTAAAGAAACACAGTAGTGAGGAGCTTACTTTTGCTCGTGCTCGTACCACCTTTTAAAAAAACCCGGAGGGACAATGCCGCAACGCACCACGGCCAACGATTTGCGCGAGCTCGATGTAGCGCCGGCAAGTGTAACGTTTGATCAAGCTTCCAGATGTTGAGAGTCGAAGTCACAATACGTCCACAACTGTCGGTTCGTCCAATCTGTACATTGTGTGGTCGGTGTTTGGTGGGGAATGACAACGGTGTGTCCTCTTCGAAGGTGCTAAAAG]
consensusID : consensus_1958#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 683 fasta sequence
[CCGGCGAGCTGAAAAGGGCCGTGCGCGTGTGTTTGTGCGAAACGTATGTGTGTGTGTGTGAGTGTGTTTGCGTAAATGCACATTTATCAGTGCAGTTCCGCGTACTCGCCGCTTCGCAATCGCAATCTGGTCTTTAATCGAGGAGGCAACATTTGACCATCGCTCGTTGGCAGTTGCCGTTTACTACTGGGGCGGGTGTAACGAGGCCCACAACAGCAGCACGGATCTTGTGCTTTAACGTGTGCTGGGAATGAGATTAAGATTTACGTGTGCGTGTAGTACTTGCCTGGCGAGCAAGAAGATATGAGATACCCGCTCATTCAGTTACAAAATTAGTGTGATCGTGTGTGTTTTATGTGATTGTGCAGTGATGATTGTCCAATTAACGTAAAGATAGCAGATTTAAGAATTTTATCAAAAGGAGTGCTTCAAAAATATATATTTGATCTCCCAAACCTTAGCACCAACGCTTCCTCGACCAACCAATACCGACAGCCCGAGAACGATCGTACCCGAGTGGAAAACACATTGTATTTTCGCAGCAAAAACAACACAGAAATCTTTAAATATTTTAAGATAAACTCCATGTCCCGACAAATCTGCTTTTTTGCGATTACATAGTAAAGAAACCCAGTAGTGAGGAGCTTACTTTTGCTCGTGCTCGTACCACCTTTTAAAAAAAC]
[+] EMBL BM616339 [CCGGCGAGCTGAAAAGGGCCGTGCGCGTGTGTTTGTGCGAAACGTATGTGTGTGTGTGTGAGTGTGTTTGCGTAAATGCACATTTATCAGTGCAGTTCCGCGTACTCGCCGCTTCGCAATCGCAATCTGGTCTTTAATCGAGGAGGCAACATTTGACCATCGCTCGTTGGCAGTTGCCGTTTACTACTGGGGCGGGTGTAACGAGGCCCACAACAGCAGCACGGATCTTGTGCTTTAACGTGTGCTGGGAATGAGATTAAGATTTACGTGTGCGTGTAGTACTTGCCTGGCGAGCAAGAAGATATGAGATACCCGCTCATTCAGTTACAAAATTAGTGTGATCGTGTGTGTTTTATGTGATTGTGCAGTGATGATTGTCCAATTAACGTAAAGATAGCAGATTTAAGAATTTTATCAAAAGGAGTGCTTCAAAAATATATATTTGATCTCCCAAACCTTAGCACCAACGCTTCCTCGACCAACCAATACCGACAGCCCGAGAACGATCGTACCCGAGTGGAAAACACATTGTATTTTCGCAGCAAAAACAACACAGAAATCTTTAAATATTTTAAGATAAACTCCATGTCCCGACAAATCTGCTTTTTTGCGATTACATAGTAAAGAAACCCAGTAGTGAGGAGCTTACTTTTGCTCGTGCTCGTACCACCTTTTAAAAAAAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1958#0 ------------------------------------------------------------
consensus_1958#1 CCGGCGAGCTGAAAAGGGCCGTGCGCGTGTGTTTGTGCGAAACGTATGTGTGTGTGTGTG 60
consensus_1958#0 ------------------------------------------------------------
consensus_1958#1 AGTGTGTTTGCGTAAATGCACATTTATCAGTGCAGTTCCGCGTACTCGCCGCTTCGCAAT 120
consensus_1958#0 ------------------------------------------------------------
consensus_1958#1 CGCAATCTGGTCTTTAATCGAGGAGGCAACATTTGACCATCGCTCGTTGGCAGTTGCCGT 180
consensus_1958#0 ----GACCCACGCG--TCCGACGAGGCCCACAACAGCAGCACGGATCTTGTGCTTTAACG 54
consensus_1958#1 TTACTACTGGGGCGGGTGTAACGAGGCCCACAACAGCAGCACGGATCTTGTGCTTTAACG 240
** *** * ****************************************
consensus_1958#0 TGTGCTGGGAATGAGATTAAGATTTACGTGTGCGTGTAGTACTTGCCTGGCGAGCAAGAA 114
consensus_1958#1 TGTGCTGGGAATGAGATTAAGATTTACGTGTGCGTGTAGTACTTGCCTGGCGAGCAAGAA 300
************************************************************
consensus_1958#0 GATATGAGATACCCGCTCATTCAGTTACAAAATTAGTGTGATCGTGTGTGTTTTATGTGA 174
consensus_1958#1 GATATGAGATACCCGCTCATTCAGTTACAAAATTAGTGTGATCGTGTGTGTTTTATGTGA 360
************************************************************
consensus_1958#0 TTGTGCAGTGATGATTGTCCAATTAACGTAAAGATAGCAGATTTAAGAATTTTATCAAAA 234
consensus_1958#1 TTGTGCAGTGATGATTGTCCAATTAACGTAAAGATAGCAGATTTAAGAATTTTATCAAAA 420
************************************************************
consensus_1958#0 GGAGTGCTTCAAAAATATATATTTGATCTCCCAAACCTTAGCACCAACGCTTCCTCGACC 294
consensus_1958#1 GGAGTGCTTCAAAAATATATATTTGATCTCCCAAACCTTAGCACCAACGCTTCCTCGACC 480
************************************************************
consensus_1958#0 AACCAATACCGACAGCCCGAGAACGATCGTACCCGAGTGGAAAACACATTGTATTTTCGC 354
consensus_1958#1 AACCAATACCGACAGCCCGAGAACGATCGTACCCGAGTGGAAAACACATTGTATTTTCGC 540
************************************************************
consensus_1958#0 AGCAAAAACAACACAGAAATCTTTAAATATTTTAAGATAAACTCCATGTCCCGACAAATC 414
consensus_1958#1 AGCAAAAACAACACAGAAATCTTTAAATATTTTAAGATAAACTCCATGTCCCGACAAATC 600
************************************************************
consensus_1958#0 TGCTTTTTTGCGATTACATAGTAAAGAAACACAGTAGTGAGGAGCTTACTTTTGCTCGTG 474
consensus_1958#1 TGCTTTTTTGCGATTACATAGTAAAGAAACCCAGTAGTGAGGAGCTTACTTTTGCTCGTG 660
****************************** *****************************
consensus_1958#0 CTCGTACCACCTTTTAAAAAAACCCGGAGGGACAATGCCGCAACGCACCACGGCCAACGA 534
consensus_1958#1 CTCGTACCACCTTTTAAAAAAAC------------------------------------- 683
***********************
consensus_1958#0 TTTGCGCGAGCTCGATGTAGCGCCGGCAAGTGTAACGTTTGATCAAGCTTCCAGATGTTG 594
consensus_1958#1 ------------------------------------------------------------
consensus_1958#0 AGAGTCGAAGTCACAATACGTCCACAACTGTCGGTTCGTCCAATCTGTACATTGTGTGGT 654
consensus_1958#1 ------------------------------------------------------------
consensus_1958#0 CGGTGTTTGGTGGGGAATGACAACGGTGTGTCCTCTTCGAAGGTGCTAAAAG 706
consensus_1958#1 ----------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||