These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2014#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 966 fasta sequence [GCAAGAATCGGCCGAGGGTAGCTAAGCATCTCGAAATCTACGCCCACGCGCATGGAGCGCGAGTACAACTGTCCGGTAACGCTCGGCAAGCCCAAGGTTAGCGTTCCGCGAAACGCTCATCGGACCGTGCGAGTTTTGACTATCTGCACAAGAAAGCCAGTCCGGGCGGGCAAGGGACAGTTATTGCGCGCCGTTTNCGGGGAAATTACTGGAAACCGCTGCCACCGGGAGCCAAAAAAACCAACGGAATTCGGAGGTTCCGGTTGGAACGAAAACGAATTGGGCAACCGAAAATTGTTCCCGGAAAACCAAGTTTCATTCCCCCGGGTTATTCGAAGAACAAGGGAATTNCCGGCCCAGGAATTTGGCCGGGAACAACACAGGGGGGTTCCTTCCCCTTAATTTCCGGGGGGCCCAACAAAAGGCCTTGGTTACCGGGCANTTTAACAGGTTTTCCCCCGGACCTTGCAAGGGAACCCGGGGTTGGCCCCCAACCNCAACAATTCGGTTAAGGAACCTTGCCGAAGGCCGGAAACCTTTGGCGGTTTTCAATTGGCCTTGGGACCGGGGCCCCCAAAGGAGGGCNGCCCAAGTTCGAAAGGAAGGTTGGTGGTTTCCGAAAAAACACGGGGTTAAGCCTGGCCCANGAGTAACGTTGGNAAACCCGAGTCNATGAATTAGGTTGGCACGGAGTGAACCGTGCCAACCNGGAAAGGAAGGTTCCCAAAGGTGGGCCAACNGGGTGGAATTTGGGGGGNCAACGGCATTTGAAAACCANAGCCGGGCCACCGGGNGGTTAATTCCAATTTTAACCGGGGGGTTACCCGGAGGACATGGGGGGGTTGGCCCGAAGAGGAGATTTTGCGGTTATAACCCGGTAGGTAACNNGCCAGGAAAGTGGTTTCCCACGGCGTTGTANACCGGACACCATTTGTTACCGGGGGTTTAACAGACACCCGTGGNGTT] [+] EMBL BX468842 [GCAAGAATCGGCCGAGGGTAGCTAAGCATCTCGAAATCTACGCCCACGCGCATGGAGCGCGAGTACAACTGTCCGGTAACGCTCGGCAAGCCCAAGGTTAGCGTTCCGCGAAACGCTCATCGGACCGTGCGAGTTTTGACTATCTGCACAAGAAAGCCAGTCCGGGCGGGCAAGGGACAGTTATTGCGCGCCGTTTNCGGGGAAATTACTGGAAACCGCTGCCACCGGGAGCCAAAAAAACCAACGGAATTCGGAGGTTCCGGTTGGAACGAAAACGAATTGGGCAACCGAAAATTGTTCCCGGAAAACCAAGTTTCATTCCCCCGGGTTATTCGAAGAACAAGGGAATTNCCGGCCCAGGAATTTGGCCGGGAACAACACAGGGGGGTTCCTTCCCCTTAATTTCCGGGGGGCCCAACAAAAGGCCTTGGTTACCGGGCANTTTAACAGGTTTTCCCCCGGACCTTGCAAGGGAACCCGGGGTTGGCCCCCAACCNCAACAATTCGGTTAAGGAACCTTGCCGAAGGCCGGAAACCTTTGGCGGTTTTCAATTGGCCTTGGGACCGGGGCCCCCAAAGGAGGGCNGCCCAAGTTCGAAAGGAAGGTTGGTGGTTTCCGAAAAAACACGGGGTTAAGCCTGGCCCANGAGTAACGTTGGNAAACCCGAGTCNATGAATTAGGTTGGCACGGAGTGAACCGTGCCAACCNGGAAAGGAAGGTTCCCAAAGGTGGGCCAACNGGGTGGAATTTGGGGGGNCAACGGCATTTGAAAACCANAGCCGGGCCACCGGGNGGTTAATTCCAATTTTAACCGGGGGGTTACCCGGAGGACATGGGGGGGTTGGCCCGAAGAGGAGATTTTGCGGTTATAACCCGGTAGGTAACNNGCCAGGAAAGTGGTTTCCCACGGCGTTGTANACCGGACACCATTTGTTACCGGGGGTTTAACAGACACCCGTGGNGTT] consensusID : consensus_2014#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 585 fasta sequence [CCGCCCACGCGTCCGGGGCGATACGTTCGTCACCAATCCAAAGCTGGAACTGTCGATGGAATCGATTTTCGTACCCGATCCGGTCGTTTCGATGGCAATCAAACCGACCAACTCGAAGGATCGTGACAACTTCGCCAAAGCGATCGCGCGCTTCACCAAGGAAGATCCAACGTTCCACTTCGAGTACGACGCGGACGTGAAGGAAACGCTCGTCTCGGGTATGGGTGAGCTGCATCTCGAAATCTACGCCCAGCGCATGGAGCGCGAGTACAACTGTCCGGTAACGCTCGGCAAGCCCAAGGTAGCGTTCCGCGAAACGCTCATCGGACCGTGCGAGTTTGACTATCTGCACAAGAAGCAGTCTGGCGGGCAAGGACAGTATGCGCGCGTTTCGGGAATACTGGAACCGCTGCCCCCGCACCAAAACACCACGATCGAGTTCGTGGACGAAACGATGGGCACGAATGTGCCGAAACAGTTCATCCCCGGTATCGAGAAAGGATTCCGCCAGATGGCGGAAAAGGGTCTCCTATCGGGCCACAAGCTGTCCGGCATTAAGTTCCGCCTGCAGGACGGTGCCCACCA] [+] EMBL BM651337 [CCGCCCACGCGTCCGGGGCGATACGTTCGTCACCAATCCAAAGCTGGAACTGTCGATGGAATCGATTTTCGTACCCGATCCGGTCGTTTCGATGGCAATCAAACCGACCAACTCGAAGGATCGTGACAACTTCGCCAAAGCGATCGCGCGCTTCACCAAGGAAGATCCAACGTTCCACTTCGAGTACGACGCGGACGTGAAGGAAACGCTCGTCTCGGGTATGGGTGAGCTGCATCTCGAAATCTACGCCCAGCGCATGGAGCGCGAGTACAACTGTCCGGTAACGCTCGGCAAGCCCAAGGTAGCGTTCCGCGAAACGCTCATCGGACCGTGCGAGTTTGACTATCTGCACAAGAAGCAGTCTGGCGGGCAAGGACAGTATGCGCGCGTTTCGGGAATACTGGAACCGCTGCCCCCGCACCAAAACACCACGATCGAGTTCGTGGACGAAACGATGGGCACGAATGTGCCGAAACAGTTCATCCCCGGTATCGAGAAAGGATTCCGCCAGATGGCGGAAAAGGGTCTCCTATCGGGCCACAAGCTGTCCGGCATTAAGTTCCGCCTGCAGGACGGTGCCCACCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2014#0 GCAAGAATCGGCCGAGGGTAGCTAAGCATCTCGAAATCTACGCCCACGCGCATGGAGCGC 60 consensus_2014#1 ------------------------------------------------------------ consensus_2014#0 GAGTACAACTGTCCGGTAACGCTCGGCAAGCCCAAGGTTAGCGTTCCGCGAAACGCTCAT 120 consensus_2014#1 ------------------------------------------------------------ consensus_2014#0 CGGACCGTGCGAGTTTTGACTATCTGCACAAGAAAGCCAGTCCGGGCGGGCAAGGGACAG 180 consensus_2014#1 ------------------------------------------------------------ consensus_2014#0 TTATTGCGCGCCGTTTNCGGGGAAATTACTGGAAACCGCTGCCACCGGGAGCCAAAAAAA 240 consensus_2014#1 ---------------------------------------------------------CCG 3 consensus_2014#0 CCAACGGAATTCGGAGGTTCCGGTTGGAACGAAAACGAATTGGGCAACCGAAAATTGTTC 300 consensus_2014#1 CCCACGCGTCCGGGGCGATACGTTCGTCACCAATCCAAAGCTGG--------AACTGTCG 55 ** *** ** * * ** * * ** ** * ** ** ** *** consensus_2014#0 CCGGAAAACCAAGTTTCATTCCC--CCGGGTTATTCGAAGAACAAGGGAATTN-CCGGCC 357 consensus_2014#1 ATGGAA--TCGATTTTCGTACCCGATCCGGTCGTTTCGATGGCAATCAAACCGACCAACT 113 **** * * **** * *** * *** ** * *** ** ** * consensus_2014#0 CAGGAATTTGGCCGGGAACAACACAGGGGGGTTCCTTCCCCTTAATTTCCGGGGGGCCCA 417 consensus_2014#1 CGAAGGATCG--TGACAACTTCGCCAAAGCGATCGCGCGCTTCA--CCAAGGAAGATCCA 169 * * * * *** * * * * ** * * * * ** * *** consensus_2014#0 ACAAAAGGCCTTGGTTAC----CGGGCANTTTAACAGGTTTTCCCCCGGACCT---TGCA 470 consensus_2014#1 ACGTTCCACTTCGAGTACGACGCGGACGTGAAGGAAACGCTCGTCTCGGGTATGGGTGAG 229 ** * * * *** *** * * * * *** * ** consensus_2014#0 AGGGAACCCGGGGTTGGCCCCCAACCNCAACAATTCGGTTAAGGAACCTTGCCGAAGGCC 530 consensus_2014#1 CTGCATCTCGAAATCTACGCCCAGCGCATGGAGCGCGAGTACAACTGTCCGGTAACGCTC 289 * * * ** * * **** * * ** ** * * * * consensus_2014#0 GG-AAACCTTTGGCGGTTTTCAATTGGCCTTGGGACCGGGGCCCCCAAAGGAGGGCNGCC 589 consensus_2014#1 GGCAAGCCCAAGGTAGCGTTCCGCGAAACGCTCATC--GGACCGTGCGAGTTTGACTATC 347 ** ** ** ** * *** * * ** ** ** * * * consensus_2014#0 CAAGTTCGAAAGGAAGGTTGGTGGTTTCCGAAAAAACACGGG-GTTAAGCCTGGCCCANG 648 consensus_2014#1 T--GCACAAGAAGCAGTCTGGCGGGCAAGGACAGTATGCGCGCGTTTCGGGAATACTGGA 405 * * * * * ** *** ** ** * * ** * *** * * consensus_2014#0 AGTAACGTTGGNAAACCCGAGT-CNATGAATTAGGTTG-GCACGGAGTGAACCGTGCCAA 706 consensus_2014#1 ACCGCTGCCCCCGCACCAAAACACCACGATCGAGTTCGTGGACGAAACGATGGGCACGAA 465 * * *** * * * ** ** * * * *** * ** * * ** consensus_2014#0 CCNGGAAAGGAAGGTTCCCAAAGGTGGGCCAACNGGGTGGAATTTGGGGGGNCAACGGCA 766 consensus_2014#1 TGTGCCGAAACAGTTCATCCCCGGTATCGAGAAAGGATTCCGCCAGATGGCGGAAAAGGG 525 * * ** * * *** * ** * * ** ** * consensus_2014#0 TTTGAAAACCANAGCCGGGCCACCGGGNGGTTAATTCCAATTTTAACCGGGGGGTTACCC 826 consensus_2014#1 TCTCCTATCGGGCCACAAGCTGTCCGGCATTAAGTTCCGCCTGCAGGACGGTGCCCACCA 585 * * * * * ** * ** * * **** * * ** * *** consensus_2014#0 GGAGGACATGGGGGGGTTGGCCCGAAGAGGAGATTTTGCGGTTATAACCCGGTAGGTAAC 886 consensus_2014#1 ------------------------------------------------------------ consensus_2014#0 NNGCCAGGAAAGTGGTTTCCCACGGCGTTGTANACCGGACACCATTTGTTACCGGGGGTT 946 consensus_2014#1 ------------------------------------------------------------ consensus_2014#0 TAACAGACACCCGTGGNGTT 966 consensus_2014#1 -------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||