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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2022#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1298 fasta sequence
[CAGCAATTCCCTGCAGGTTANTGCTGAAGAAACTGAACTGGGCTGACGTTTCCTGATTTACAAGTACAGCTGGGATCTGAGCCTGAACCAACTTTGCCCTGCCTGCTGCTGCTGCCCTGGGCTGGAGTGCTGGTCAACCTGGACGCTCTACTCGACGCCCTTCCCTGGCCCAGCTCCTGCCGTCCAGTCTGTATACCTGTCCTGTTAGCAGCTGAGTCCCACGACAGTGCCCATGTNTCCACAACTGCACATATTCTCGGGTAATACAGCTGACTGNCTGCAGNCTTGCCNCCACGTACGAGCTACCTATCTATCNGGAATGNGAGNAGCAGACAGACAAGAGCAGNNAGNAGAAAGNAAAGAGGAATTTTGGACTGCAAACGCAAAAAAGGGAACCCCAGAACATGCTACAGNTCNCGCTCTTTCCGCCCTGAGNGCCAAGNCCACACCCTGNGCCTATCAACGGCCAACCCTGCAAACTCTGTGTTTGCNCATTNCTCNGATACCTAAACTACCCNTGCATCTTCGCCCCGATTGTANAAAAAACTATCCGGNTTCANNACCCTGGCCCCAAGCAAAGNGGTATCCCAATATTGGTTCACGCCANATNTCACACNAATNNAAAGACANTTCCCCAAAGCAATATTTGCGGGTATNGCCAAAGCNNNCNGGANCCATAGATNATNATGCACTTTGGCGANCGNAGCAAGGTATAACNCCAGGAAGGGAAAACANAGCCNTGAGAGAGTGAACTTAACCCCCGGCCATTGAATAACACCAACAAACAACACGAAACTTCGATGACGAAATGGCGNAAACATACNACACAAACAAATATCAANAATAAAANNTCCANTAGTGCAAAANGACACNCGACCANACGACCTTGGCNATAAGACCATAANGANGACTCNANCACCCCAAGAAATGTGTNTGTGCTATACCGTGGGANAAGGCCATNNCGTGNNACAANCAGGAANAAAATTNCAAGGCNNTAATNNGGGTNATCAAATTAAATCCNGAACNNTGCANCGACCNAAAAAGGGGGANTGNAAACCACCGGNTGNCAACCAACNNCNAGNANCACAACANCCCNACGGCAACGATATCGTAGNNNAACTNTGGNCCNAAGAAGGAGGAGGGANNTAANGAANATTGGCANGATAAAGAGGACACGCCNACCCCACGCATGACGGANGATTNACACAAGANAACGANGATAGAANATAACANTGAACCGCTTNGGGGGTAGCAACAACAACAAAAAAGGAATANTAAGCAAAANAACTTAATTTGCT]
[+] EMBL AL695303 [CAGCAATTCCCTGCAGGTTANTGCTGAAGAAACTGAACTGGGCTGACGTTTCCTGATTTACAAGTACAGCTGGGATCTGAGCCTGAACCAACTTTGCCCTGCCTGCTGCTGCTGCCCTGGGCTGGAGTGCTGGTCAACCTGGACGCTCTACTCGACGCCCTTCCCTGGCCCAGCTCCTGCCGTCCAGTCTGTATACCTGTCCTGTTAGCAGCTGAGTCCCACGACAGTGCCCATGTNTCCACAACTGCACATATTCTCGGGTAATACAGCTGACTGNCTGCAGNCTTGCCNCCACGTACGAGCTACCTATCTATCNGGAATGNGAGNAGCAGACAGACAAGAGCAGNNAGNAGAAAGNAAAGAGGAATTTTGGACTGCAAACGCAAAAAAGGGAACCCCAGAACATGCTACAGNTCNCGCTCTTTCCGCCCTGAGNGCCAAGNCCACACCCTGNGCCTATCAACGGCCAACCCTGCAAACTCTGTGTTTGCNCATTNCTCNGATACCTAAACTACCCNTGCATCTTCGCCCCGATTGTANAAAAAACTATCCGGNTTCANNACCCTGGCCCCAAGCAAAGNGGTATCCCAATATTGGTTCACGCCANATNTCACACNAATNNAAAGACANTTCCCCAAAGCAATATTTGCGGGTATNGCCAAAGCNNNCNGGANCCATAGATNATNATGCACTTTGGCGANCGNAGCAAGGTATAACNCCAGGAAGGGAAAACANAGCCNTGAGAGAGTGAACTTAACCCCCGGCCATTGAATAACACCAACAAACAACACGAAACTTCGATGACGAAATGGCGNAAACATACNACACAAACAAATATCAANAATAAAANNTCCANTAGTGCAAAANGACACNCGACCANACGACCTTGGCNATAAGACCATAANGANGACTCNANCACCCCAAGAAATGTGTNTGTGCTATACCGTGGGANAAGGCCATNNCGTGNNACAANCAGGAANAAAATTNCAAGGCNNTAATNNGGGTNATCAAATTAAATCCNGAACNNTGCANCGACCNAAAAAGGGGGANTGNAAACCACCGGNTGNCAACCAACNNCNAGNANCACAACANCCCNACGGCAACGATATCGTAGNNNAACTNTGGNCCNAAGAAGGAGGAGGGANNTAANGAANATTGGCANGATAAAGAGGACACGCCNACCCCACGCATGACGGANGATTNACACAAGANAACGANGATAGAANATAACANTGAACCGCTTNGGGGGTAGCAACAACAACAAAAAAGGAATANTAAGCAAAANAACTTAATTTGCT]
consensusID : consensus_2022#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 780 fasta sequence
[TGTACAAGTACAGCGGGATCGAGCCGAACAACTTTGCCCTGCCGCTGCTGCTGCCCGGGCTGGAGGCGGTCAACCGGACGCTCTACTCGACGCCCTTCCCGGCCCAGCTCCTGCCGTCCAGTCTGTATCCGTCCGTTAGCAGCGAGTCCACGACAGTGCCCATGTTCCACACGCACTTTCTCGGGTATCAGCCGCCGCTGCAGCTGCCCCACGTCGAGCACTTCTATCGGAAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGGATTGGCCGAACCAAAGGAACCGACGTCGTCGTCTTCGCCGGGCAGCAACCGGCTTACGCCACCGAAGGGTGCATTTTTCTACGCGAGTGCGGTGGAAAATTCGCTCACCGCCCAGCAGGCTTCCATTGCTACCATCCATTAGATCCACACTGCGTCCACTCGCTGTTTGCTGCAGCGTACCGCGGACAGTGCAGTGTACCGCTGTACAAAAAGATCGATTGGAAATTCACGTCAATCATCTGCAAGCCCGAAAGATGCTACCTAGTCGTCCCCAGCTGTTGCTACTGGAGCTTTGCAAGAGATCCAGCTTTCGTTCCTTATCGATGCACAAAAGGCGCACCCGGAAACAAAACAAAAATCCAACCCACTCGTCAACGGCCCACATGGCGGGTTGCACTGGAGAAACTCCCACCCTCGTAAGTGCTATCTAAGCGTTAAATTACCTTCGCCCTTTGCGGTAGAACAAAATAGAAGCAAATGAAACNAAAAAATCATTGCCGGANGCGCAAGTGAAC]
[+] EMBL BX621471 [TGTACAAGTACAGCGGGATCGAGCCGAACAACTTTGCCCTGCCGCTGCTGCTGCCCGGGCTGGAGGCGGTCAACCGGACGCTCTACTCGACGCCCTTCCCGGCCCAGCTCCTGCCGTCCAGTCTGTATCCGTCCGTTAGCAGCGAGTCCACGACAGTGCCCATGTTCCACACGCACTTTCTCGGGTATCAGCCGCCGCTGCAGCTGCCCCACGTCGAGCACTTCTATCGGAAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGGATTGGCCGAACCAAAGGAACCGACGTCGTCGTCTTCGCCGGGCAGCAACCGGCTTACGCCACCGAAGGGTGCATTTTTCTACGCGAGTGCGGTGGAAAATTCGCTCACCGCCCAGCAGGCTTCCATTGCTACCATCCATTAGATCCACACTGCGTCCACTCGCTGTTTGCTGCAGCGTACCGCGGACAGTGCAGTGTACCGCTGTACAAAAAGATCGATTGGAAATTCACGTCAATCATCTGCAAGCCCGAAAGATGCTACCTAGTCGTCCCCAGCTGTTGCTACTGGAGCTTTGCAAGAGATCCAGCTTTCGTTCCTTATCGATGCACAAAAGGCGCACCCGGAAACAAAACAAAAATCCAACCCACTCGTCAACGGCCCACATGGCGGGTTGCACTGGAGAAACTCCCACCCTCGTAAGTGCTATCTAAGCGTTAAATTACCTTCGCCCTTTGCGGTAGAACAAAATAGAAGCAAATGAAACNAAAAAATCATTGCCGGANGCGCAAGTGAAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2022#0 CAGCAATTCCCTGCAGGTTANTGCTGAAGAAACTGAACTGGGCTGACGTTTCCTGATTTA 60
consensus_2022#1 --------------------------------------------------------TGTA 4
* **
consensus_2022#0 CAAGTACAGCTGGGATCTGAGCCTGAACCAACTTTGCCCTGCCTGCTGCTGCTGCCCTGG 120
consensus_2022#1 CAAGTACAGC-GGGATC-GAGCCGAA--CAACTTTGCCCTGCC-GCTGCTGCTGCCC-GG 58
********** ****** ***** * *************** ************* **
consensus_2022#0 GCTGGAGTGCTGGTCAACCTGGACGCTCTACTCGACGCCCTTCCCTGGCCCAGCTCCTGC 180
consensus_2022#1 GCTGGAGG--CGGTCAACC-GGACGCTCTACTCGACGCCCTTCCC-GGCCCAGCTCCTGC 114
******* ******** ************************* **************
consensus_2022#0 CGTCCAGTCTGTATACCTGTCCTGTTAGCAGCTGAGTCCCACGACAGTGCCCATGTNTCC 240
consensus_2022#1 CGTCCAGTCTGTAT--CCGTCC-GTTAGCAGC-GAGTCC-ACGACAGTGCCCATGTT-CC 168
************** * **** ********* ****** **************** **
consensus_2022#0 ACAACTGCACATATTCTCGGGTAATACAGCTGACTGNCTGCAGNCTTGCCNCCACGTACG 300
consensus_2022#1 ACA----CGCACTTTCTCGGGTA--TCAGCCGCC--GCTGCAGCT---GCCCCACGT-CG 216
*** * ** ********** **** * * ****** * ****** **
consensus_2022#0 AGCTACCTATCTATCNGGAATGNGAGNAGCAGACAGACAAGAGCAGNNAGNAGAAAGNAA 360
consensus_2022#1 AGC-ACTT--CTATCGGAAGGAGCAGCAGCAG-----CAGCAGCAGCA-GCAGCAGGGAT 267
*** ** * ***** * * ** ***** ** ***** * ** * * *
consensus_2022#0 AGAGGAATTTTGGACTGCAAACGCAAAAAAGGGAACCCCAGAACATGCTACAGNTCNCGC 420
consensus_2022#1 TGG------CCGAACCAAAGGAACCGACGTCGTCGTCTTCGC-CGGGCAGCAA--CCGGC 318
* * ** * * * * * * * ** ** * **
consensus_2022#0 TCTTTCCGCCCTGAGNGCCAAGNCCACACCCTGNGCCTATCAACGGCCAACCCTGCAAAC 480
consensus_2022#1 TTACGCCACCGAAGGGTGCATTTTTCTACGCGAGTGCGGTGGAAAATTCGCTCACCG--C 376
* ** ** * ** ** * * * * * * * *
consensus_2022#0 TCTGTGTTTGCNCATTNCTCNGATAC-CTAAACTACCCNTGCATCTTCGCCCCGATTG-T 538
consensus_2022#1 CCAGCAGGCTTCCATTGCTACCATCCATTAGATCCACACTGCGTCCACTCGCTGTTTGCT 436
* * **** ** ** * ** * * *** ** * * * * *** *
consensus_2022#0 ANAAAAAACTATCCGGNTTCANNACCCTGGCCCCAAGCAAAGNGGTATCCCAATATTGGT 598
consensus_2022#1 GCAGCGTACCG--CGGACAGTGCAGTGTACCGCTGTACAAAAAGAT---CGATTGGAAAT 491
* ** *** * * * * **** * * * * * *
consensus_2022#0 TCACGCCANATNTCACACNAATNNAAAGACANTTCCCCAAAGCAATATTTGCGGGTATNG 658
consensus_2022#1 TCACGTCAATCATCTGCAAGCCCGAAAGATGCTACCT--AGTCGTCCCCAGCTGTTGCTA 549
***** ** ** ***** * ** * * ** * *
consensus_2022#0 CCAAAGCNNN-CNGGANCCATAGATNATNATGCACTTTGGCGANCGNAGCAAGGTATAAC 717
consensus_2022#1 CTGGAGCTTTGCAAGAGATCCAGCTTTCGTTCCTTATCGATGCACAAA---AGGCGCACC 606
* *** * ** ** * * * * * * * * *** * *
consensus_2022#0 NCCAGGAAGGGAAAACANAGCCNTGAGAGAGTGAACTTAACCCCCGGC-CATTGAATAAC 776
consensus_2022#1 C----GGAAACAAAACAAAAATCCAACCCACTCG--TCAACGGCCCACATGGCGGGTTGC 660
* * ****** * * * * * *** ** * * * *
consensus_2022#0 ACCAACAAACAACACGAAACTTCGATGACGAAATGGCGNAAACATACNACACAAACAAAT 836
consensus_2022#1 ACTGGAGAA--ACTCCCACCCTCGTAAGTGCTATCTAAGCGTTAAATTACCTTCGCCCTT 718
** ** ** * * * *** * ** * * ** * *
consensus_2022#0 ATCAANAATAAAANNTCCANTAGTGCAAAANGACACNCGACCANACGACCTTGGCNATAA 896
consensus_2022#1 TGCGGTAGAACAAAAT----------AGAAGCAAATGAAACNAAAAAATCATTGCCGGAN 768
* * * ** * * ** * * ** * * * * * ** *
consensus_2022#0 GACCATAANGANGACTCNANCACCCCAAGAAATGTGTNTGTGCTATACCGTGGGANAAGG 956
consensus_2022#1 GCGCAAGTGAAC------------------------------------------------ 780
* ** *
consensus_2022#0 CCATNNCGTGNNACAANCAGGAANAAAATTNCAAGGCNNTAATNNGGGTNATCAAATTAA 1016
consensus_2022#1 ------------------------------------------------------------
consensus_2022#0 ATCCNGAACNNTGCANCGACCNAAAAAGGGGGANTGNAAACCACCGGNTGNCAACCAACN 1076
consensus_2022#1 ------------------------------------------------------------
consensus_2022#0 NCNAGNANCACAACANCCCNACGGCAACGATATCGTAGNNNAACTNTGGNCCNAAGAAGG 1136
consensus_2022#1 ------------------------------------------------------------
consensus_2022#0 AGGAGGGANNTAANGAANATTGGCANGATAAAGAGGACACGCCNACCCCACGCATGACGG 1196
consensus_2022#1 ------------------------------------------------------------
consensus_2022#0 ANGATTNACACAAGANAACGANGATAGAANATAACANTGAACCGCTTNGGGGGTAGCAAC 1256
consensus_2022#1 ------------------------------------------------------------
consensus_2022#0 AACAACAAAAAAGGAATANTAAGCAAAANAACTTAATTTGCT 1298
consensus_2022#1 ------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||