These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2041#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 613 fasta sequence [CCGCGGACGCGTGGGTCCGTCTGCCCCCCTTACGGGTTTGTGATAAATCCTTCCTGCTGCGCTTGGCCGTTCGTGCGTGTGCGTTGCCTGCGTGTTGTGCGTCTTTCTGTGCGTAAAATGTCCTCCAAGCGAAAGCCGGACGGTACGAAGAAGGCGGTGAAGAAGCGTAAAAACTCGGAGTCCAACTATGACTCCGACCTGAGCGACGAGTATCCGCGGGCGGGCGAACCGTCGACCCGCGAGGTGGTGGTCGAGGAGCTGCGACCGATGGAGAAGCTGCCGGAGGAGCTGCTGGCCGTGTACGACAAGGGTCCCGGCAAGCTGCTCATCGCTGGCATGGTGTCCTGGGAAATGACCGGCAAGCGGGACTCGAAGGGTGTCACAAAGATTCGGCCGAATCTGTTCACCTTCCATCGGTTCACCGGCGAAACGTACCGTTCGATGGCAAGCTTCTGTTCTGCCGCGCACTCGGTTTTAATTGATGAAAACTGGAAAGCTTTTACGTTCGGACGCAATCAGCTGAGCCAGCTGGGCCACGGCGATACGGTGACGTGCGAGAAGCCGACGCAGGTGGCCGACTTGGCCGACTTCAACGTCATACAGGCGGCGTGCG] [+] EMBL BM610610 [CCGCGGACGCGTGGGTCCGTCTGCCCCCCTTACGGGTTTGTGATAAATCCTTCCTGCTGCGCTTGGCCGTTCGTGCGTGTGCGTTGCCTGCGTGTTGTGCGTCTTTCTGTGCGTAAAATGTCCTCCAAGCGAAAGCCGGACGGTACGAAGAAGGCGGTGAAGAAGCGTAAAAACTCGGAGTCCAACTATGACTCCGACCTGAGCGACGAGTATCCGCGGGCGGGCGAACCGTCGACCCGCGAGGTGGTGGTCGAGGAGCTGCGACCGATGGAGAAGCTGCCGGAGGAGCTGCTGGCCGTGTACGACAAGGGTCCCGGCAAGCTGCTCATCGCTGGCATGGTGTCCTGGGAAATGACCGGCAAGCGGGACTCGAAGGGTGTCACAAAGATTCGGCCGAATCTGTTCACCTTCCATCGGTTCACCGGCGAAACGTACCGTTCGATGGCAAGCTTCTGTTCTGCCGCGCACTCGGTTTTAATTGATGAAAACTGGAAAGCTTTTACGTTCGGACGCAATCAGCTGAGCCAGCTGGGCCACGGCGATACGGTGACGTGCGAGAAGCCGACGCAGGTGGCCGACTTGGCCGACTTCAACGTCATACAGGCGGCGTGCG] consensusID : consensus_2041#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 566 fasta sequence [AATCGCCCGAGGNTTAATCTCGCTGGTTTGTCCCGTTCGGTTCGCGCTCCGGGTTCGCCGTCTTGCAAACGTCGCCTTTGTCCTCCCCCCCATTGTACTCTGTCCATTCCGTCTGCCCCCCTTACGGGTTTGTGATAAATCCTTCCTGCTGCGCTTGGCCATTCGTGCGTGTGCGTTGCCTGCGTGTTGTGCGTCTTTCTGTGCGTAAAATGTCCTCCAAGCGAAAGCCGGACGGTACGAAGAAGGCGGTGAAGAAGCGTAAAAACTCGGAGTCCAACTATGACTCTGACCTGAGCGACGAGTATCCGCGGGCGGGCGAACCGTCGACCCGCGAGGTGGTGGTCGAGGAGCTGCGACCGATGGAGAAGCTGCCGGAGGAGCTGCTGGCCGTGTACGACAAGGGCCCCGGCAAGCTGCTCATCGCTGGCATGGTGTCCTGGGAAATGACCGGCAAACGGGACTCGAAGGGTGTCACAAAGATTCGGCCGAATCTGTTCACCTTCCATCGGTTCACCGGCGAAACGTACCGTTCGATGGCAAGCTTCTGTTCTGCCGCGCACTCGGTT] [+] EMBL AL932405 [AATCGCCCGAGGNTTAATCTCGCTGGTTTGTCCCGTTCGGTTCGCGCTCCGGGTTCGCCGTCTTGCAAACGTCGCCTTTGTCCTCCCCCCCATTGTACTCTGTCCATTCCGTCTGCCCCCCTTACGGGTTTGTGATAAATCCTTCCTGCTGCGCTTGGCCATTCGTGCGTGTGCGTTGCCTGCGTGTTGTGCGTCTTTCTGTGCGTAAAATGTCCTCCAAGCGAAAGCCGGACGGTACGAAGAAGGCGGTGAAGAAGCGTAAAAACTCGGAGTCCAACTATGACTCTGACCTGAGCGACGAGTATCCGCGGGCGGGCGAACCGTCGACCCGCGAGGTGGTGGTCGAGGAGCTGCGACCGATGGAGAAGCTGCCGGAGGAGCTGCTGGCCGTGTACGACAAGGGCCCCGGCAAGCTGCTCATCGCTGGCATGGTGTCCTGGGAAATGACCGGCAAACGGGACTCGAAGGGTGTCACAAAGATTCGGCCGAATCTGTTCACCTTCCATCGGTTCACCGGCGAAACGTACCGTTCGATGGCAAGCTTCTGTTCTGCCGCGCACTCGGTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2041#0 ------------------------------------------------------------ consensus_2041#1 AATCGCCCGAGGNTTAATCTCGCTGGTTTGTCCCGTTCGGTTCGCGCTCCGGGTTCGCCG 60 consensus_2041#0 --------------------------------CCGCGGACGCGTGGGTCCGTCTGCCCCC 28 consensus_2041#1 TCTTGCAAACGTCGCCTTTGTCCTCCCCCCCATTGTACTCTGTCCATTCCGTCTGCCCCC 120 * * ************* consensus_2041#0 CTTACGGGTTTGTGATAAATCCTTCCTGCTGCGCTTGGCCGTTCGTGCGTGTGCGTTGCC 88 consensus_2041#1 CTTACGGGTTTGTGATAAATCCTTCCTGCTGCGCTTGGCCATTCGTGCGTGTGCGTTGCC 180 **************************************** ******************* consensus_2041#0 TGCGTGTTGTGCGTCTTTCTGTGCGTAAAATGTCCTCCAAGCGAAAGCCGGACGGTACGA 148 consensus_2041#1 TGCGTGTTGTGCGTCTTTCTGTGCGTAAAATGTCCTCCAAGCGAAAGCCGGACGGTACGA 240 ************************************************************ consensus_2041#0 AGAAGGCGGTGAAGAAGCGTAAAAACTCGGAGTCCAACTATGACTCCGACCTGAGCGACG 208 consensus_2041#1 AGAAGGCGGTGAAGAAGCGTAAAAACTCGGAGTCCAACTATGACTCTGACCTGAGCGACG 300 ********************************************** ************* consensus_2041#0 AGTATCCGCGGGCGGGCGAACCGTCGACCCGCGAGGTGGTGGTCGAGGAGCTGCGACCGA 268 consensus_2041#1 AGTATCCGCGGGCGGGCGAACCGTCGACCCGCGAGGTGGTGGTCGAGGAGCTGCGACCGA 360 ************************************************************ consensus_2041#0 TGGAGAAGCTGCCGGAGGAGCTGCTGGCCGTGTACGACAAGGGTCCCGGCAAGCTGCTCA 328 consensus_2041#1 TGGAGAAGCTGCCGGAGGAGCTGCTGGCCGTGTACGACAAGGGCCCCGGCAAGCTGCTCA 420 ******************************************* **************** consensus_2041#0 TCGCTGGCATGGTGTCCTGGGAAATGACCGGCAAGCGGGACTCGAAGGGTGTCACAAAGA 388 consensus_2041#1 TCGCTGGCATGGTGTCCTGGGAAATGACCGGCAAACGGGACTCGAAGGGTGTCACAAAGA 480 ********************************** ************************* consensus_2041#0 TTCGGCCGAATCTGTTCACCTTCCATCGGTTCACCGGCGAAACGTACCGTTCGATGGCAA 448 consensus_2041#1 TTCGGCCGAATCTGTTCACCTTCCATCGGTTCACCGGCGAAACGTACCGTTCGATGGCAA 540 ************************************************************ consensus_2041#0 GCTTCTGTTCTGCCGCGCACTCGGTTTTAATTGATGAAAACTGGAAAGCTTTTACGTTCG 508 consensus_2041#1 GCTTCTGTTCTGCCGCGCACTCGGTT---------------------------------- 566 ************************** consensus_2041#0 GACGCAATCAGCTGAGCCAGCTGGGCCACGGCGATACGGTGACGTGCGAGAAGCCGACGC 568 consensus_2041#1 ------------------------------------------------------------ consensus_2041#0 AGGTGGCCGACTTGGCCGACTTCAACGTCATACAGGCGGCGTGCG 613 consensus_2041#1 --------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||