These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2055#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 583 fasta sequence [CGACCCAACACTTTGGACGCGAATTGGCTGTTTCTGTTGATTTCGCACCATATTCCCGGCATTTTTGTATAGTAATTTGTGTGTACTGGATCGGCAAACGCGTCAACCCCAAACGGCACAAGGCATCTATTCGAAAAGCGCCACAGCGTCGCGTTGTGCCTATTCGTAGCGGTTGGAAGGTTTGTTTGCATCGCTTGTTTACACGCTACCGAGACCTTTGCCAGCCACCAGCCATGGACCAGATGCTGCCGAGTCCGGGATTTTCGATCCCCAGCATCGGGACACCGCTGCACCAGCCGGAGAGGATCAGCAGATTCTGCCCCACGCCTACCAACAGCAACAGTCGATGCCGCACATGACACCGATGGGTGGCCTTAGCTCGAGCAACTACACAATGCCGGCCATCGGTTCGACGTCCGGCAAGAGCATGCACACGTACGCGCCCAGCTTCTCCACCCCCCAGAACATGATTCAACCACAGACACCGCAAAGTCTCATGTCACCGATGGTGCCGATGACGGAATCGAAGGCGGCAGCAACACCGAGCCACCCGCAGAGCGGCACGAGGGGCAGCGTGCGGGAT] [+] EMBL CNS097AZ [CGACCCAACACTTTGGACGCGAATTGGCTGTTTCTGTTGATTTCGCACCATATTCCCGGCATTTTTGTATAGTAATTTGTGTGTACTGGATCGGCAAACGCGTCAACCCCAAACGGCACAAGGCATCTATTCGAAAAGCGCCACAGCGTCGCGTTGTGCCTATTCGTAGCGGTTGGAAGGTTTGTTTGCATCGCTTGTTTACACGCTACCGAGACCTTTGCCAGCCACCAGCCATGGACCAGATGCTGCCGAGTCCGGGATTTTCGATCCCCAGCATCGGGACACCGCTGCACCAGCCGGAGAGGATCAGCAGATTCTGCCCCACGCCTACCAACAGCAACAGTCGATGCCGCACATGACACCGATGGGTGGCCTTAGCTCGAGCAACTACACAATGCCGGCCATCGGTTCGACGTCCGGCAAGAGCATGCACACGTACGCGCCCAGCTTCTCCACCCCCCAGAACATGATTCAACCACAGACACCGCAAAGTCTCATGTCACCGATGGTGCCGATGACGGAATCGAAGGCGGCAGCAACACCGAGCCACCCGCAGAGCGGCACGAGGGGCAGCGTGCGGGAT] consensusID : consensus_2055#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 150 fasta sequence [ATTCGGCCCCCCGAGGTTTTNAAACAACACTTTGGGACGCGAATTGGCTGTTTCTGTTGATTCTCGCACCATATTCCCCCGGCANNTTTTCGTATAGGTAAGCTTATGCTGTGTACCTTGGATCGGGGCAAACGCCGTCAAAACCCCCCT] [+] EMBL AL932795 [ATTCGGCCCCCCGAGGTTTTNAAACAACACTTTGGGACGCGAATTGGCTGTTTCTGTTGATTCTCGCACCATATTCCCCCGGCANNTTTTCGTATAGGTAAGCTTATGCTGTGTACCTTGGATCGGGGCAAACGCCGTCAAAACCCCCCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2055#0 -------------------CGACCCAACACTTTGG-ACGCGAATTGGCTGTTTCTGTTGA 40 consensus_2055#1 ATTCGGCCCCCCGAGGTTTTNAAACAACACTTTGGGACGCGAATTGGCTGTTTCTGTTGA 60 * *********** ************************ consensus_2055#0 TT-TCGCACCATATTCCC--GGCATTTTT--GTATAGTAATTTGTGTGTACTGGATCGGC 95 consensus_2055#1 TTCTCGCACCATATTCCCCCGGCANNTTTTCGTATAGGTAAGCTTATGCTGTGTACCTTG 120 ** *************** **** *** ****** * * ** ** * * consensus_2055#0 AAACGCGTCAACCCCAAACGGCACAAGGCATCTATTCGAAAAGCGCCACAGCGTCGCGTT 155 consensus_2055#1 GATCGGGGCAAACGC---CGTCAAAACCCCCCT--------------------------- 150 * ** * *** * * ** ** ** * ** consensus_2055#0 GTGCCTATTCGTAGCGGTTGGAAGGTTTGTTTGCATCGCTTGTTTACACGCTACCGAGAC 215 consensus_2055#1 ------------------------------------------------------------ consensus_2055#0 CTTTGCCAGCCACCAGCCATGGACCAGATGCTGCCGAGTCCGGGATTTTCGATCCCCAGC 275 consensus_2055#1 ------------------------------------------------------------ consensus_2055#0 ATCGGGACACCGCTGCACCAGCCGGAGAGGATCAGCAGATTCTGCCCCACGCCTACCAAC 335 consensus_2055#1 ------------------------------------------------------------ consensus_2055#0 AGCAACAGTCGATGCCGCACATGACACCGATGGGTGGCCTTAGCTCGAGCAACTACACAA 395 consensus_2055#1 ------------------------------------------------------------ consensus_2055#0 TGCCGGCCATCGGTTCGACGTCCGGCAAGAGCATGCACACGTACGCGCCCAGCTTCTCCA 455 consensus_2055#1 ------------------------------------------------------------ consensus_2055#0 CCCCCCAGAACATGATTCAACCACAGACACCGCAAAGTCTCATGTCACCGATGGTGCCGA 515 consensus_2055#1 ------------------------------------------------------------ consensus_2055#0 TGACGGAATCGAAGGCGGCAGCAACACCGAGCCACCCGCAGAGCGGCACGAGGGGCAGCG 575 consensus_2055#1 ------------------------------------------------------------ consensus_2055#0 TGCGGGAT 583 consensus_2055#1 -------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||