These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2056#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 658 fasta sequence [TGTTTTAGTCACTTTACTGAAGCAAACCTTCTTAATTTGTGAAAAAATATATTTCTAATAGTTTAATTCAGGTATCATCAACGTTTTCAGGTATCATCAACAATTTCAAGCATCATACCACAATCTTGGCTTTGGCTAAGACAGATTCGGGAAGGGGTACCATCTAACCAATGGGTACAGTTTAGTGATGGGTAAAGTTGGGAGTCGACTCCGATCTGCCTGCGACAATTTCAGAACCAATTCGGAAAGGTAGATCCGCCCAGCATTATCCGGAGTCGTTCGAAATCGTCCGGAATCGCTCGGGGTCATCCGGATTCCGAGTCGTCTGTAGTCGGCCTTCGAAACAAAGGCCTGTATACAAAGTGCACGAGCAAAGTAAAAGACAAAAAAAAACACAACGTAATGTAATGCCTGCTTACAAGCACATTGCACCTGTTCACTCCAATGCCTCCTGTTGACTCCAATCGACACCGATTCCAGTCAACTCTGATCGATTCTGAACGACTCCGAAAGACTTTGATTCTGATCGACTCCGGCCGACTCCGGACGACCCCAACTCCAAACGTCTCCGGCCTAGTCCAGACGACTCCGAACGACTCCGGATGACTCCAAACGACACCGAGCGACTCCGGACGACACCGAACAACTCCAAATCCGG] [+] EMBL BX618908 [TGTTTTAGTCACTTTACTGAAGCAAACCTTCTTAATTTGTGAAAAAATATATTTCTAATAGTTTAATTCAGGTATCATCAACGTTTTCAGGTATCATCAACAATTTCAAGCATCATACCACAATCTTGGCTTTGGCTAAGACAGATTCGGGAAGGGGTACCATCTAACCAATGGGTACAGTTTAGTGATGGGTAAAGTTGGGAGTCGACTCCGATCTGCCTGCGACAATTTCAGAACCAATTCGGAAAGGTAGATCCGCCCAGCATTATCCGGAGTCGTTCGAAATCGTCCGGAATCGCTCGGGGTCATCCGGATTCCGAGTCGTCTGTAGTCGGCCTTCGAAACAAAGGCCTGTATACAAAGTGCACGAGCAAAGTAAAAGACAAAAAAAAACACAACGTAATGTAATGCCTGCTTACAAGCACATTGCACCTGTTCACTCCAATGCCTCCTGTTGACTCCAATCGACACCGATTCCAGTCAACTCTGATCGATTCTGAACGACTCCGAAAGACTTTGATTCTGATCGACTCCGGCCGACTCCGGACGACCCCAACTCCAAACGTCTCCGGCCTAGTCCAGACGACTCCGAACGACTCCGGATGACTCCAAACGACACCGAGCGACTCCGGACGACACCGAACAACTCCAAATCCGG] consensusID : consensus_2056#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 490 fasta sequence [CCCACGCGTCCGCGGACGCGTGGGATTGCATCCGATGAATTCAGGTATCATCAACGTTTTCAGGTATCATCAACGATTTCAAGCATCATACCGCAATCTTGGCTTTGGCTAAGACAGATTCGGGAAGGGGTCCCGCGGTCTTGAGATAAAGTGTGAAACCCTGTATTGTACGACTTGGAAACACTTCGTGTTGTACCCTATCATCCATGTTGAAAACTTTTTCGAGATAAATTCAAATTGTTTGTATCGTATCATATATTGCATTATAGTTGACCAGAAAACTGGCTTCTTATATTCTTGAATGAACATTATCAACGGTATTTTAATGATCATTGGCATAAAACCAAAAAAATGCTGCAAGAAAAGTTATATTAAAAGGCATATGGTTCCATAAGTGCTGTTAAGGATTGTGGGTTTCACTATTGCCCCTACACTGATAGCCCATAGATCCTCACTTCAATGGAGATTGTTATTTGTATAACTATTTGCG] [+] EMBL BM601519 [CCCACGCGTCCGCGGACGCGTGGGATTGCATCCGATGAATTCAGGTATCATCAACGTTTTCAGGTATCATCAACGATTTCAAGCATCATACCGCAATCTTGGCTTTGGCTAAGACAGATTCGGGAAGGGGTCCCGCGGTCTTGAGATAAAGTGTGAAACCCTGTATTGTACGACTTGGAAACACTTCGTGTTGTACCCTATCATCCATGTTGAAAACTTTTTCGAGATAAATTCAAATTGTTTGTATCGTATCATATATTGCATTATAGTTGACCAGAAAACTGGCTTCTTATATTCTTGAATGAACATTATCAACGGTATTTTAATGATCATTGGCATAAAACCAAAAAAATGCTGCAAGAAAAGTTATATTAAAAGGCATATGGTTCCATAAGTGCTGTTAAGGATTGTGGGTTTCACTATTGCCCCTACACTGATAGCCCATAGATCCTCACTTCAATGGAGATTGTTATTTGTATAACTATTTGCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2056#0 TGTTTTAGTCACTTTACTGAAGCAAACCTTCTTAATTTGTGAAAAAATATATTTCTAATA 60 consensus_2056#1 ---------------------------CCCACGCGTCCGCGGACGCGTGGGATTGCATCC 33 * * * * * * ** * consensus_2056#0 GTTTAATTCAGGTATCATCAACGTTTTCAGGTATCATCAACAATTTCAAGCATCATACCA 120 consensus_2056#1 GATGAATTCAGGTATCATCAACGTTTTCAGGTATCATCAACGATTTCAAGCATCATACCG 93 * * ************************************* ***************** consensus_2056#0 CAATCTTGGCTTTGGCTAAGACAGATTCGGGAAGGGGTACCATCTAACCAATGGGTACAG 180 consensus_2056#1 CAATCTTGGCTTTGGCTAAGACAGATTCGGGAAGGGGTCCCG--CGGTCTTGAGATAAAG 151 ************************************** ** * * ** ** consensus_2056#0 TTTAGTGATGGGTAAAGTTGGGAGTCGACTCCGATCTGCCTGCGACAATTTCAGAACCAA 240 consensus_2056#1 TGTGAAACCCTGTATTGTACGACTTGGAAACA---CTTCGTGTTGTACCCTATCATCCAT 208 * * *** ** * * ** * ** * ** * * * *** consensus_2056#0 TTCGGAAAGGTAGATCCGCCCAGCATTATCCGGAGTCGTTCGAAAT-CGTCCGGAATCGC 299 consensus_2056#1 GTTGAAAA------CTTTTTCGAGATAAATTCAAATTGTTTGTATCGTATCATATATTGC 262 * * *** * ** * * * *** * * ** ** ** consensus_2056#0 -TCGGGGTCATCCGGATTCCGAGTCGTCTGTAGTCGGCCTTCGAAACAAAGGCCTGTATA 358 consensus_2056#1 ATTATAGTTGACCAGAAAACTGGCTTCTTATATTC-----TTGAATGAACATTATCAACG 317 * ** ** ** * * * ** ** * *** ** * * consensus_2056#0 CAAAGTGCACGAGCAAAGTAAAAGACAAAAAAAAACACAACGTAATGTAATGCCTGCTTA 418 consensus_2056#1 GTATTTTAATGATCATTGGCATAAAACCAAAAAAATGC--TGCAAGAAAAGTTATATTAA 375 * * * ** ** * * * * ******* * * ** ** * * * consensus_2056#0 CAAGCACATTGCACCTGTTCACTCCAATGCCTCCTGTTGACTCCAATCGACACCGATTCC 478 consensus_2056#1 AAGGCATATGGT-TCCATAAGTGCTGTTAAGGATTGTGGGTTTCACT--ATTGCCCCTAC 432 * *** ** * * * * * *** * * ** * * * * * consensus_2056#0 AGTCAACTCTGATCGATTCTGAACGACTCCGAAAGACTTTGAT-TCTGATCGACTCCGGC 537 consensus_2056#1 ACTGATAGCCCATAGATCCTC----ACTTCAATGGAGATTGTTATTTGTATAACTATTTG 488 * * * * ** *** ** *** * * ** *** * * ** *** consensus_2056#0 CGACTCCGGACGACCCCAACTCCAAACGTCTCCGGCCTAGTCCAGACGACTCCGAACGAC 597 consensus_2056#1 CG---------------------------------------------------------- 490 ** consensus_2056#0 TCCGGATGACTCCAAACGACACCGAGCGACTCCGGACGACACCGAACAACTCCAAATCCG 657 consensus_2056#1 ------------------------------------------------------------ consensus_2056#0 G 658 consensus_2056#1 - |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||