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Anopheles gambiae
cluster # 206 cluster # 206       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_206#0 length = 666 sequences # 1  
consensus_206#1 length = 573 sequences # 1  

consensusID : consensus_206#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 666
fasta sequence
                              [CCGGTCTATGTTGGCAAGTCCGCTATGTTCGACTAGCTGTTTAACGAACTAGTGATAAAAAGATACAAATCAGTTTAAAGATAAAATAATTGTGACAATTTGAATCGTGTAGAGAATCAATGCTACATGCTGTTATTAAAACCAATAGTACTCCAATAGCCGTTTAGACGTGTGCCGTTTACCGTTTGGTTGTGCTGTGTTGTAAAGGTACGGAGCAGGCTGGCGTACCGCACACGGTGCGGTTGCGCACTTCTAGGATCTAACATTCTTCCTTAGTAGTTGCAATTTTGGAATATGATAGGTTTAAGTCGACGTGGAGTTAGTGCAGGACCGTCACTGAGTTTACCGTCTACACTGGAGGACTCTACAAACAATTGGAAAGGAACACCTTCGGGACCAACCGACCCTTCGCAGCAAGGTGCGGGTCCTGGAGGAACTGGAGTCGGCCCTGGAGTTGCTGGTAATGGTGGTCCAGGTGGCCCCAGTGGTCCAGGGGTCCAAGGACCCGGTGTGAACAGTTTTGGTGGTCCTGGTGGAGCTAACAATTTTGGAGGTCCTGTGTTTCCAGCAGCCGGTCAAGGTTCTCCAGCCGGAGGATCTGCTTCGAATAGTTATCAAAATTTACCACCAGGCACTGGTTCAAATACGCCACAGTATACAGCATCC]

[+] EMBL BM579273             [CCGGTCTATGTTGGCAAGTCCGCTATGTTCGACTAGCTGTTTAACGAACTAGTGATAAAAAGATACAAATCAGTTTAAAGATAAAATAATTGTGACAATTTGAATCGTGTAGAGAATCAATGCTACATGCTGTTATTAAAACCAATAGTACTCCAATAGCCGTTTAGACGTGTGCCGTTTACCGTTTGGTTGTGCTGTGTTGTAAAGGTACGGAGCAGGCTGGCGTACCGCACACGGTGCGGTTGCGCACTTCTAGGATCTAACATTCTTCCTTAGTAGTTGCAATTTTGGAATATGATAGGTTTAAGTCGACGTGGAGTTAGTGCAGGACCGTCACTGAGTTTACCGTCTACACTGGAGGACTCTACAAACAATTGGAAAGGAACACCTTCGGGACCAACCGACCCTTCGCAGCAAGGTGCGGGTCCTGGAGGAACTGGAGTCGGCCCTGGAGTTGCTGGTAATGGTGGTCCAGGTGGCCCCAGTGGTCCAGGGGTCCAAGGACCCGGTGTGAACAGTTTTGGTGGTCCTGGTGGAGCTAACAATTTTGGAGGTCCTGTGTTTCCAGCAGCCGGTCAAGGTTCTCCAGCCGGAGGATCTGCTTCGAATAGTTATCAAAATTTACCACCAGGCACTGGTTCAAATACGCCACAGTATACAGCATCC]


>consensus_206#0 CCGGTCTATGTTGGCAAGTCCGCTATGTTCGACTAGCTGTTTAACGAACTAGTGATAAAA AGATACAAATCAGTTTAAAGATAAAATAATTGTGACAATTTGAATCGTGTAGAGAATCAA TGCTACATGCTGTTATTAAAACCAATAGTACTCCAATAGCCGTTTAGACGTGTGCCGTTT ACCGTTTGGTTGTGCTGTGTTGTAAAGGTACGGAGCAGGCTGGCGTACCGCACACGGTGC GGTTGCGCACTTCTAGGATCTAACATTCTTCCTTAGTAGTTGCAATTTTGGAATATGATA GGTTTAAGTCGACGTGGAGTTAGTGCAGGACCGTCACTGAGTTTACCGTCTACACTGGAG GACTCTACAAACAATTGGAAAGGAACACCTTCGGGACCAACCGACCCTTCGCAGCAAGGT GCGGGTCCTGGAGGAACTGGAGTCGGCCCTGGAGTTGCTGGTAATGGTGGTCCAGGTGGC CCCAGTGGTCCAGGGGTCCAAGGACCCGGTGTGAACAGTTTTGGTGGTCCTGGTGGAGCT AACAATTTTGGAGGTCCTGTGTTTCCAGCAGCCGGTCAAGGTTCTCCAGCCGGAGGATCT GCTTCGAATAGTTATCAAAATTTACCACCAGGCACTGGTTCAAATACGCCACAGTATACA GCATCC



consensusID : consensus_206#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 573
fasta sequence
                              [CCGCCCACGCGTCCGATTTGAATCGTGTAGAGAATCAATGCTACATGCTGTTATTAAAACCAATAGTACTCCAATAGCCGTTTAGACGTGTGCCGTTTACCGTTTGGTTGTGCTGTGTTGTAAAGGTACGGAGCAGGCTGGCGTACCGCACACGGTGCGGTTGCGCACTTCTAGGATCTAACATTCTTCCTTAGTAGTTGCAATTTTGGAATATGATAGGTTTAAGTCGACGTGGAGTTAGTGCAGGACCGTCACTGAGTTTACCGTCTACACTGGAGGACTCTACAAACAATTGGAAAGGAACACCTTCGGGACCAACCGACCCTTCGCAGCAAGGTGCGGGTCCTGGAGGAACTGGAGTCGGCCCTGGAGTTGCTGGTAATGGTGGTCCAGGTGGCCCCAGTGGTCCAGGGGTCCAAGGACCCGGTGTGAACAGTTTTGGTGGTCCTGGTGGAGCTAACAATTTTGGAGGTCCTGTGTTTCCAGCAGCCGGTCAAGGTTCTCCAGCCGGAGGATCTGCTTCGAATAGTTATCAAAATTTACCACCAGGCACTGGTTCAAATACGCCACAGT]

[+] EMBL BM611297             [CCGCCCACGCGTCCGATTTGAATCGTGTAGAGAATCAATGCTACATGCTGTTATTAAAACCAATAGTACTCCAATAGCCGTTTAGACGTGTGCCGTTTACCGTTTGGTTGTGCTGTGTTGTAAAGGTACGGAGCAGGCTGGCGTACCGCACACGGTGCGGTTGCGCACTTCTAGGATCTAACATTCTTCCTTAGTAGTTGCAATTTTGGAATATGATAGGTTTAAGTCGACGTGGAGTTAGTGCAGGACCGTCACTGAGTTTACCGTCTACACTGGAGGACTCTACAAACAATTGGAAAGGAACACCTTCGGGACCAACCGACCCTTCGCAGCAAGGTGCGGGTCCTGGAGGAACTGGAGTCGGCCCTGGAGTTGCTGGTAATGGTGGTCCAGGTGGCCCCAGTGGTCCAGGGGTCCAAGGACCCGGTGTGAACAGTTTTGGTGGTCCTGGTGGAGCTAACAATTTTGGAGGTCCTGTGTTTCCAGCAGCCGGTCAAGGTTCTCCAGCCGGAGGATCTGCTTCGAATAGTTATCAAAATTTACCACCAGGCACTGGTTCAAATACGCCACAGT]


>consensus_206#1 CCGCCCACGCGTCCGATTTGAATCGTGTAGAGAATCAATGCTACATGCTGTTATTAAAAC CAATAGTACTCCAATAGCCGTTTAGACGTGTGCCGTTTACCGTTTGGTTGTGCTGTGTTG TAAAGGTACGGAGCAGGCTGGCGTACCGCACACGGTGCGGTTGCGCACTTCTAGGATCTA ACATTCTTCCTTAGTAGTTGCAATTTTGGAATATGATAGGTTTAAGTCGACGTGGAGTTA GTGCAGGACCGTCACTGAGTTTACCGTCTACACTGGAGGACTCTACAAACAATTGGAAAG GAACACCTTCGGGACCAACCGACCCTTCGCAGCAAGGTGCGGGTCCTGGAGGAACTGGAG TCGGCCCTGGAGTTGCTGGTAATGGTGGTCCAGGTGGCCCCAGTGGTCCAGGGGTCCAAG GACCCGGTGTGAACAGTTTTGGTGGTCCTGGTGGAGCTAACAATTTTGGAGGTCCTGTGT TTCCAGCAGCCGGTCAAGGTTCTCCAGCCGGAGGATCTGCTTCGAATAGTTATCAAAATT TACCACCAGGCACTGGTTCAAATACGCCACAGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_206#0      CCGGTCTATGTTGGCAAGTCCGCTATGTTCGACTAGCTGTTTAACGAACTAGTGATAAAA 60
consensus_206#1      ------------------------------------------------------------
                                                                                 

consensus_206#0      AGATACAAATCAGTTTAAAGATAAAATAATTGTGACAATTTGAATCGTGTAGAGAATCAA 120
consensus_206#1      ---------------------CCGCCCACGCGTC-CGATTTGAATCGTGTAGAGAATCAA 38
                                                *   **  * ***********************

consensus_206#0      TGCTACATGCTGTTATTAAAACCAATAGTACTCCAATAGCCGTTTAGACGTGTGCCGTTT 180
consensus_206#1      TGCTACATGCTGTTATTAAAACCAATAGTACTCCAATAGCCGTTTAGACGTGTGCCGTTT 98
                     ************************************************************

consensus_206#0      ACCGTTTGGTTGTGCTGTGTTGTAAAGGTACGGAGCAGGCTGGCGTACCGCACACGGTGC 240
consensus_206#1      ACCGTTTGGTTGTGCTGTGTTGTAAAGGTACGGAGCAGGCTGGCGTACCGCACACGGTGC 158
                     ************************************************************

consensus_206#0      GGTTGCGCACTTCTAGGATCTAACATTCTTCCTTAGTAGTTGCAATTTTGGAATATGATA 300
consensus_206#1      GGTTGCGCACTTCTAGGATCTAACATTCTTCCTTAGTAGTTGCAATTTTGGAATATGATA 218
                     ************************************************************

consensus_206#0      GGTTTAAGTCGACGTGGAGTTAGTGCAGGACCGTCACTGAGTTTACCGTCTACACTGGAG 360
consensus_206#1      GGTTTAAGTCGACGTGGAGTTAGTGCAGGACCGTCACTGAGTTTACCGTCTACACTGGAG 278
                     ************************************************************

consensus_206#0      GACTCTACAAACAATTGGAAAGGAACACCTTCGGGACCAACCGACCCTTCGCAGCAAGGT 420
consensus_206#1      GACTCTACAAACAATTGGAAAGGAACACCTTCGGGACCAACCGACCCTTCGCAGCAAGGT 338
                     ************************************************************

consensus_206#0      GCGGGTCCTGGAGGAACTGGAGTCGGCCCTGGAGTTGCTGGTAATGGTGGTCCAGGTGGC 480
consensus_206#1      GCGGGTCCTGGAGGAACTGGAGTCGGCCCTGGAGTTGCTGGTAATGGTGGTCCAGGTGGC 398
                     ************************************************************

consensus_206#0      CCCAGTGGTCCAGGGGTCCAAGGACCCGGTGTGAACAGTTTTGGTGGTCCTGGTGGAGCT 540
consensus_206#1      CCCAGTGGTCCAGGGGTCCAAGGACCCGGTGTGAACAGTTTTGGTGGTCCTGGTGGAGCT 458
                     ************************************************************

consensus_206#0      AACAATTTTGGAGGTCCTGTGTTTCCAGCAGCCGGTCAAGGTTCTCCAGCCGGAGGATCT 600
consensus_206#1      AACAATTTTGGAGGTCCTGTGTTTCCAGCAGCCGGTCAAGGTTCTCCAGCCGGAGGATCT 518
                     ************************************************************

consensus_206#0      GCTTCGAATAGTTATCAAAATTTACCACCAGGCACTGGTTCAAATACGCCACAGTATACA 660
consensus_206#1      GCTTCGAATAGTTATCAAAATTTACCACCAGGCACTGGTTCAAATACGCCACAGT----- 573
                     *******************************************************     

consensus_206#0      GCATCC 666
consensus_206#1      ------
                           




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)