These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2066#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 690 fasta sequence [GCAGAATCGGCACGAGGCTTTTTTCGTTGAATAAATTAATATTAATATTCAATTTAAATATTCCGATATGATGATTCGCTCGCAAAAACAGAAACAAAAAAGAGTGTGCAAATGAAGGCAGCAGCACGGTGTCGGTGTCGTTAAATTGTGACAACACTTTGCGTTATCATTTGTTACACATGGGCACACACTTACGCACAAACACACATACACACTTGCACTTGTTATTGCTTGCGCTTCACTTGCTTCAATCGATCAAATTTTGTATCACTTTTTTTCGGTTGTGTGTGTGTGTACACAGGCACAAACGCAAAACGAACGAGTTGCTGTGATCAATTTTCTTGCCACCATCAGAGGTAGGCTACGGTAACTTTGCAGGGCTTTTCCTTCTTGACCCTGTCGTGGCGCGCGCACTTGGGTTTCGCAAACTTCACAACATCACGGTGGCCGGCAGACGAAGCTGGTCGTATTGTTGAGCGAAGGACACACGGACACTCACTCGTTCGGTATATGTCGAGGTGGTTGAAAAAACAAATTGGAACTATTTCTCCGCTTCCTCGGCGTTCGCGTTCCGCTTTGCACGGTTTGTTCTCGGTTTCGTCTCCGTTGCAGCTGAGCTTACGCAAAAAAAAACGGGATCGCGGAACGAGCCAAACAGGGGCGCTGCGGTTTTCCAAAGAACTAACGAAT] [+] EMBL BX467744 [GCAGAATCGGCACGAGGCTTTTTTCGTTGAATAAATTAATATTAATATTCAATTTAAATATTCCGATATGATGATTCGCTCGCAAAAACAGAAACAAAAAAGAGTGTGCAAATGAAGGCAGCAGCACGGTGTCGGTGTCGTTAAATTGTGACAACACTTTGCGTTATCATTTGTTACACATGGGCACACACTTACGCACAAACACACATACACACTTGCACTTGTTATTGCTTGCGCTTCACTTGCTTCAATCGATCAAATTTTGTATCACTTTTTTTCGGTTGTGTGTGTGTGTACACAGGCACAAACGCAAAACGAACGAGTTGCTGTGATCAATTTTCTTGCCACCATCAGAGGTAGGCTACGGTAACTTTGCAGGGCTTTTCCTTCTTGACCCTGTCGTGGCGCGCGCACTTGGGTTTCGCAAACTTCACAACATCACGGTGGCCGGCAGACGAAGCTGGTCGTATTGTTGAGCGAAGGACACACGGACACTCACTCGTTCGGTATATGTCGAGGTGGTTGAAAAAACAAATTGGAACTATTTCTCCGCTTCCTCGGCGTTCGCGTTCCGCTTTGCACGGTTTGTTCTCGGTTTCGTCTCCGTTGCAGCTGAGCTTACGCAAAAAAAAACGGGATCGCGGAACGAGCCAAACAGGGGCGCTGCGGTTTTCCAAAGAACTAACGAAT] consensusID : consensus_2066#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 575 fasta sequence [CAGAAACAAAGAAGGGTGAGCAAATGAAGGCAGCAGCGCTTCCCCGTGTCGGTGTCGTTAAATTGTGACAACACTTTGCGTTATCATTTGTTACACATGGGCACACACTTACGCACAAACACACATACACACTTGCACTTGCTATTGCTTGCGCTTCACTTGCTTCAATCGATCAAATTTTGTATCACTTTTTTTCGGTTGTGTGTGTGTACACAGGCACAAACGCAAAACGAACGAGTTGCTGTGATCAATTTTCTTGCCACCATCAGAGGTAGGCTACGGTAACTTTGCAGGGCTTTTCCTTCTTGACCCTGTCGTGGCGCGCGCACTTGGGTTTCGCAAACTTCACAACATCACTGTAGCCGGCAGACGAAGCTGGTCGTATTGTTGAGCGAAGGACACACGGACACTCACTCGTTCGGTATATGTCGAAGTGGTTGAAAAAACAAATTGGAACTGTTTCTCCGCTTCTTCGCGTTCGCGTTCCGCTTTGCACGGTTTGTTCTCGGTTTCGTCTCCGTTGCAGCTGAGCTTACGCAAAAAAAAACGGGATCGCGGAACCCACGCGTCCGCGG] [-] EMBL BM651695 [CAGAAACAAAGAAGGGTGAGCAAATGAAGGCAGCAGCGCTTCCCCGTGTCGGTGTCGTTAAATTGTGACAACACTTTGCGTTATCATTTGTTACACATGGGCACACACTTACGCACAAACACACATACACACTTGCACTTGCTATTGCTTGCGCTTCACTTGCTTCAATCGATCAAATTTTGTATCACTTTTTTTCGGTTGTGTGTGTGTACACAGGCACAAACGCAAAACGAACGAGTTGCTGTGATCAATTTTCTTGCCACCATCAGAGGTAGGCTACGGTAACTTTGCAGGGCTTTTCCTTCTTGACCCTGTCGTGGCGCGCGCACTTGGGTTTCGCAAACTTCACAACATCACTGTAGCCGGCAGACGAAGCTGGTCGTATTGTTGAGCGAAGGACACACGGACACTCACTCGTTCGGTATATGTCGAAGTGGTTGAAAAAACAAATTGGAACTGTTTCTCCGCTTCTTCGCGTTCGCGTTCCGCTTTGCACGGTTTGTTCTCGGTTTCGTCTCCGTTGCAGCTGAGCTTACGCAAAAAAAAACGGGATCGCGGAACCCACGCGTCCGCGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2066#0 GCAGAATCGGCACGAGGCTTTTTTCGTTGAATAAATTAATATTAATATTCAATTTAAATA 60 consensus_2066#1 ------------------------------------------------------------ consensus_2066#0 TTCCGATATGATGATTCGCTCGCAAAAACAGAAACAAAAAAGAGTGTGCAAATGAAGGCA 120 consensus_2066#1 ----------------------------CAGAAACAAAGAAGGGTGAGCAAATGAAGGCA 32 ********** *** *** ************* consensus_2066#0 GCAGCACG-----GTGTCGGTGTCGTTAAATTGTGACAACACTTTGCGTTATCATTTGTT 175 consensus_2066#1 GCAGCGCTTCCCCGTGTCGGTGTCGTTAAATTGTGACAACACTTTGCGTTATCATTTGTT 92 ***** * *********************************************** consensus_2066#0 ACACATGGGCACACACTTACGCACAAACACACATACACACTTGCACTTGTTATTGCTTGC 235 consensus_2066#1 ACACATGGGCACACACTTACGCACAAACACACATACACACTTGCACTTGCTATTGCTTGC 152 ************************************************* ********** consensus_2066#0 GCTTCACTTGCTTCAATCGATCAAATTTTGTATCACTTTTTTTCGGTTGTGTGTGTGTGT 295 consensus_2066#1 GCTTCACTTGCTTCAATCGATCAAATTTTGTATCACTTTTTTTCGGTTGTGTGTGTGT-- 210 ********************************************************** consensus_2066#0 ACACAGGCACAAACGCAAAACGAACGAGTTGCTGTGATCAATTTTCTTGCCACCATCAGA 355 consensus_2066#1 ACACAGGCACAAACGCAAAACGAACGAGTTGCTGTGATCAATTTTCTTGCCACCATCAGA 270 ************************************************************ consensus_2066#0 GGTAGGCTACGGTAACTTTGCAGGGCTTTTCCTTCTTGACCCTGTCGTGGCGCGCGCACT 415 consensus_2066#1 GGTAGGCTACGGTAACTTTGCAGGGCTTTTCCTTCTTGACCCTGTCGTGGCGCGCGCACT 330 ************************************************************ consensus_2066#0 TGGGTTTCGCAAACTTCACAACATCACGGTGGCCGGCAGACGAAGCTGGTCGTATTGTTG 475 consensus_2066#1 TGGGTTTCGCAAACTTCACAACATCACTGTAGCCGGCAGACGAAGCTGGTCGTATTGTTG 390 *************************** ** ***************************** consensus_2066#0 AGCGAAGGACACACGGACACTCACTCGTTCGGTATATGTCGAGGTGGTTGAAAAAACAAA 535 consensus_2066#1 AGCGAAGGACACACGGACACTCACTCGTTCGGTATATGTCGAAGTGGTTGAAAAAACAAA 450 ****************************************** ***************** consensus_2066#0 TTGGAACTATTTCTCCGCTTCCTCGGCGTTCGCGTTCCGCTTTGCACGGTTTGTTCTCGG 595 consensus_2066#1 TTGGAACTGTTTCTCCGCTTCTTCG-CGTTCGCGTTCCGCTTTGCACGGTTTGTTCTCGG 509 ******** ************ *** ********************************** consensus_2066#0 TTTCGTCTCCGTTGCAGCTGAGCTTACGCAAAAAAAAACGGGATCGCGGAACGAGCCAAA 655 consensus_2066#1 TTTCGTCTCCGTTGCAGCTGAGCTTACGCAAAAAAAAACGGGATCGCGGAACCCACGCGT 569 **************************************************** * consensus_2066#0 CAGGGGCGCTGCGGTTTTCCAAAGAACTAACGAAT 690 consensus_2066#1 CCGCGG----------------------------- 575 * * ** |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||