These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2126#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 663 fasta sequence [CGACCCACGCGTCCGCGGCAGGTTGGTAGCGGTATCGAACGAATGGAAATAGCCGAGTTCTACTGCCGGAACGTTGCCGTACTGCTTCCGGTGCTTCTAGTGCTGCTGCTGGTGGTGCTGCCGAGCGCCAACAATCGCAAGGCCCGTTCGGTGGGATCGGTAGCCGCCGCCGCTCAACCCACCGACTCGTCCGACTGCGATCTGCTCGGGTGCGGCGGTATTTACGAGTGTTACGGCAATGGTTGGGTGAACTATCTGCCGTACCGGGCCGGCGAACGGTACAACATCCCACTGAGCGCGTTCCACGCCGGGGCCAGCACGCAGCAGGGCCAGCCGGAGTGTCTGCTCGGCACGGCCAACAACTATCTGCCGTGGGTGACGGAGGACGGCCGGCTGACGGTACGGCCCGGACCGCATGCGCTCGATCTGTCCGGTCTGCGGCTGTCCGATCACGGTGTGCAGGGGTTGGTGCAGGGTGTCAGCGCACTGATACCACTTGAAGAAGTGCTCCATCTATCGATCGCTAGGAACGAACTAACGCTTGTACCCTCGCCAACGCTGAAAAAGTTCCAAAATGTGCGCCTCCTCTCGCTGAGTGGCAATTTCTTCACTGAACTTCTCCAACGACACGGCCGAACACAACCGTTTGCCATTGCTGACCAA] [+] EMBL BM652753 [CGACCCACGCGTCCGCGGCAGGTTGGTAGCGGTATCGAACGAATGGAAATAGCCGAGTTCTACTGCCGGAACGTTGCCGTACTGCTTCCGGTGCTTCTAGTGCTGCTGCTGGTGGTGCTGCCGAGCGCCAACAATCGCAAGGCCCGTTCGGTGGGATCGGTAGCCGCCGCCGCTCAACCCACCGACTCGTCCGACTGCGATCTGCTCGGGTGCGGCGGTATTTACGAGTGTTACGGCAATGGTTGGGTGAACTATCTGCCGTACCGGGCCGGCGAACGGTACAACATCCCACTGAGCGCGTTCCACGCCGGGGCCAGCACGCAGCAGGGCCAGCCGGAGTGTCTGCTCGGCACGGCCAACAACTATCTGCCGTGGGTGACGGAGGACGGCCGGCTGACGGTACGGCCCGGACCGCATGCGCTCGATCTGTCCGGTCTGCGGCTGTCCGATCACGGTGTGCAGGGGTTGGTGCAGGGTGTCAGCGCACTGATACCACTTGAAGAAGTGCTCCATCTATCGATCGCTAGGAACGAACTAACGCTTGTACCCTCGCCAACGCTGAAAAAGTTCCAAAATGTGCGCCTCCTCTCGCTGAGTGGCAATTTCTTCACTGAACTTCTCCAACGACACGGCCGAACACAACCGTTTGCCATTGCTGACCAA] consensusID : consensus_2126#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 102 fasta sequence [CCGCCCACGCGTCCGGGTTCGTCCGGCAGGTTGGTAGCGGGATCAAACGAATGGAAATATCCGAGTTCTACTGCCGGAACGTTGCCGTACTGCTTCCGGTGC] [+] EMBL BM600514 [CCGCCCACGCGTCCGGGTTCGTCCGGCAGGTTGGTAGCGGGATCAAACGAATGGAAATATCCGAGTTCTACTGCCGGAACGTTGCCGTACTGCTTCCGGTGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2126#0 CGACCCACGCGTCCG--------CGGCAGGTTGGTAGCGGTATCGAACGAATGGAAATAG 52 consensus_2126#1 CCGCCCACGCGTCCGGGTTCGTCCGGCAGGTTGGTAGCGGGATCAAACGAATGGAAATAT 60 * ************ ***************** *** ************** consensus_2126#0 CCGAGTTCTACTGCCGGAACGTTGCCGTACTGCTTCCGGTGCTTCTAGTGCTGCTGCTGG 112 consensus_2126#1 CCGAGTTCTACTGCCGGAACGTTGCCGTACTGCTTCCGGTGC------------------ 102 ****************************************** consensus_2126#0 TGGTGCTGCCGAGCGCCAACAATCGCAAGGCCCGTTCGGTGGGATCGGTAGCCGCCGCCG 172 consensus_2126#1 ------------------------------------------------------------ consensus_2126#0 CTCAACCCACCGACTCGTCCGACTGCGATCTGCTCGGGTGCGGCGGTATTTACGAGTGTT 232 consensus_2126#1 ------------------------------------------------------------ consensus_2126#0 ACGGCAATGGTTGGGTGAACTATCTGCCGTACCGGGCCGGCGAACGGTACAACATCCCAC 292 consensus_2126#1 ------------------------------------------------------------ consensus_2126#0 TGAGCGCGTTCCACGCCGGGGCCAGCACGCAGCAGGGCCAGCCGGAGTGTCTGCTCGGCA 352 consensus_2126#1 ------------------------------------------------------------ consensus_2126#0 CGGCCAACAACTATCTGCCGTGGGTGACGGAGGACGGCCGGCTGACGGTACGGCCCGGAC 412 consensus_2126#1 ------------------------------------------------------------ consensus_2126#0 CGCATGCGCTCGATCTGTCCGGTCTGCGGCTGTCCGATCACGGTGTGCAGGGGTTGGTGC 472 consensus_2126#1 ------------------------------------------------------------ consensus_2126#0 AGGGTGTCAGCGCACTGATACCACTTGAAGAAGTGCTCCATCTATCGATCGCTAGGAACG 532 consensus_2126#1 ------------------------------------------------------------ consensus_2126#0 AACTAACGCTTGTACCCTCGCCAACGCTGAAAAAGTTCCAAAATGTGCGCCTCCTCTCGC 592 consensus_2126#1 ------------------------------------------------------------ consensus_2126#0 TGAGTGGCAATTTCTTCACTGAACTTCTCCAACGACACGGCCGAACACAACCGTTTGCCA 652 consensus_2126#1 ------------------------------------------------------------ consensus_2126#0 TTGCTGACCAA 663 consensus_2126#1 ----------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||