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Anopheles gambiae
cluster # 2199 cluster # 2199       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2199#0 length = 1125 sequences # 1  
consensus_2199#1 length = 656 sequences # 1  

consensusID : consensus_2199#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1125
fasta sequence
                              [ANCACCAGCAGATACCCGCTTTAGCACAGAAATTTTATCCCCAAAATAACTCTTCCGTACGCGCATGCAGTGGACGAGCGTTTGTGTTGAGCCGTTCGAACTGTTGTCTATTGACCGGGGACTAGAATCAAGTGTATTGTGTGCTGNACTAACGGACGGGGCCGTGATTTTTATTCCTTTCTTGGAAGCAAACGAAATATTAAAACATCATCCAACGGAAAGGACCATGGCGAAACAGTGAAGCCAATCTTGGACCACAACCAGGAACGGGGCAGNCAGGAACCCAGGATTGTAATGCAAGGATTACCGGGCTGCTGGAAAAGGTTCAAACGGCATTCGGAGCCAGCCCCTAAGACTTAATNTGGTCCAGACTNTTGGGGNCACAAGCACTGTGTGCACACAATTGNANACAAAGGCCCTCGGGTACTTCACAAAAATTNCCAACGTTCCTAACGTTANTCTNCGGTTGGTTCCCGGACTTAATATATTCTTAAGGGAACACCTTGGCNGGCCCACAAGGTGGAAGGTATCTTCAAAGCGGATTGGGTGAACCNGCAACAAAANGGGCACACCATTGGCCCCATACCTGGCATTCCTCGGGGGNATTGACAAAGGACAAAACCTTTACCAGGCACCTTCCCAAAAGNATATGGTAGGGCCGACANACTATCCGCAACAGGNACACTTCAANCATNTACAACCNGAATACACAAAGAGAAAGCGGAATTACTTGAACACGGAAAGAAAGACCANGTGCCTNAAACATAACCAGTAANNATTGTNACCNTGATCCCCGTCACACAANAGCAANACACNGCAAACCCGCACAAAACANCCGCCAACCCGAGAATAGGGGGACNCCGCNCCACCAAACAAAGGCCCTNAAGAACCCCCGNGAAACNCCANACAAAGACAGACNCACACCCACCNAAAACCACNCGCCAANGAACNNAACAACANGACATAAACGGGACCACACGNACGAGAAACCCAANAACACGACACTGNCCGGAACCAACACCANCCGCACNACCCGGACCATAAAAACGCGCCCNACNCNAACCNCGACAGAGCAACGCACGNANCNCNACACACAGACACGACAAANNCGCGCANACCAGCCCA]

[+] EMBL AL696486             [ANCACCAGCAGATACCCGCTTTAGCACAGAAATTTTATCCCCAAAATAACTCTTCCGTACGCGCATGCAGTGGACGAGCGTTTGTGTTGAGCCGTTCGAACTGTTGTCTATTGACCGGGGACTAGAATCAAGTGTATTGTGTGCTGNACTAACGGACGGGGCCGTGATTTTTATTCCTTTCTTGGAAGCAAACGAAATATTAAAACATCATCCAACGGAAAGGACCATGGCGAAACAGTGAAGCCAATCTTGGACCACAACCAGGAACGGGGCAGNCAGGAACCCAGGATTGTAATGCAAGGATTACCGGGCTGCTGGAAAAGGTTCAAACGGCATTCGGAGCCAGCCCCTAAGACTTAATNTGGTCCAGACTNTTGGGGNCACAAGCACTGTGTGCACACAATTGNANACAAAGGCCCTCGGGTACTTCACAAAAATTNCCAACGTTCCTAACGTTANTCTNCGGTTGGTTCCCGGACTTAATATATTCTTAAGGGAACACCTTGGCNGGCCCACAAGGTGGAAGGTATCTTCAAAGCGGATTGGGTGAACCNGCAACAAAANGGGCACACCATTGGCCCCATACCTGGCATTCCTCGGGGGNATTGACAAAGGACAAAACCTTTACCAGGCACCTTCCCAAAAGNATATGGTAGGGCCGACANACTATCCGCAACAGGNACACTTCAANCATNTACAACCNGAATACACAAAGAGAAAGCGGAATTACTTGAACACGGAAAGAAAGACCANGTGCCTNAAACATAACCAGTAANNATTGTNACCNTGATCCCCGTCACACAANAGCAANACACNGCAAACCCGCACAAAACANCCGCCAACCCGAGAATAGGGGGACNCCGCNCCACCAAACAAAGGCCCTNAAGAACCCCCGNGAAACNCCANACAAAGACAGACNCACACCCACCNAAAACCACNCGCCAANGAACNNAACAACANGACATAAACGGGACCACACGNACGAGAAACCCAANAACACGACACTGNCCGGAACCAACACCANCCGCACNACCCGGACCATAAAAACGCGCCCNACNCNAACCNCGACAGAGCAACGCACGNANCNCNACACACAGACACGACAAANNCGCGCANACCAGCCCA]


>consensus_2199#0 ANCACCAGCAGATACCCGCTTTAGCACAGAAATTTTATCCCCAAAATAACTCTTCCGTAC GCGCATGCAGTGGACGAGCGTTTGTGTTGAGCCGTTCGAACTGTTGTCTATTGACCGGGG ACTAGAATCAAGTGTATTGTGTGCTGNACTAACGGACGGGGCCGTGATTTTTATTCCTTT CTTGGAAGCAAACGAAATATTAAAACATCATCCAACGGAAAGGACCATGGCGAAACAGTG AAGCCAATCTTGGACCACAACCAGGAACGGGGCAGNCAGGAACCCAGGATTGTAATGCAA GGATTACCGGGCTGCTGGAAAAGGTTCAAACGGCATTCGGAGCCAGCCCCTAAGACTTAA TNTGGTCCAGACTNTTGGGGNCACAAGCACTGTGTGCACACAATTGNANACAAAGGCCCT CGGGTACTTCACAAAAATTNCCAACGTTCCTAACGTTANTCTNCGGTTGGTTCCCGGACT TAATATATTCTTAAGGGAACACCTTGGCNGGCCCACAAGGTGGAAGGTATCTTCAAAGCG GATTGGGTGAACCNGCAACAAAANGGGCACACCATTGGCCCCATACCTGGCATTCCTCGG GGGNATTGACAAAGGACAAAACCTTTACCAGGCACCTTCCCAAAAGNATATGGTAGGGCC GACANACTATCCGCAACAGGNACACTTCAANCATNTACAACCNGAATACACAAAGAGAAA GCGGAATTACTTGAACACGGAAAGAAAGACCANGTGCCTNAAACATAACCAGTAANNATT GTNACCNTGATCCCCGTCACACAANAGCAANACACNGCAAACCCGCACAAAACANCCGCC AACCCGAGAATAGGGGGACNCCGCNCCACCAAACAAAGGCCCTNAAGAACCCCCGNGAAA CNCCANACAAAGACAGACNCACACCCACCNAAAACCACNCGCCAANGAACNNAACAACAN GACATAAACGGGACCACACGNACGAGAAACCCAANAACACGACACTGNCCGGAACCAACA CCANCCGCACNACCCGGACCATAAAAACGCGCCCNACNCNAACCNCGACAGAGCAACGCA CGNANCNCNACACACAGACACGACAAANNCGCGCANACCAGCCCA



consensusID : consensus_2199#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 656
fasta sequence
                              [CCGCTGAATGCTGCGCACAGCAAAATTTTATCCAAAATAACCTCTTCCGACCGTGCAGTGCAGTGGGCGAGCGTTTGTGTTGAGCCGTTCGAACTGTTGTCTATTGACCGGCACTAGGAATCAAGTGTATAGTGTGCTGTACTACCGCACGGGGTCGTGATTTTTATTCCTTTCTGCAAGCAAAAGCAATATTAAAACATCATCAAACGAAGCGACATGGCAAACAGTGAAGCAATTCTGGACACACAGACGGCCACCCAGACCCAGATGACGCAAGATACGGCGCTGGAAAGTCAACCGATCGAGCACCCTAGCTATGGCCAGCTGCTGGGCAAGCATGTGAAAATGAAAAGCCTCGACCTGCGCCACAGTGAGTTTAAGGTGGGACGAGAAGGCACATGCCATCTGATCTTGGATGAAGACAACCTTCCGCCCTCCAAGTTGTGCCGAATTTCGAAGCACCACTTCACGATCAAGAAGGATCTGAACGACACAACCAGCCCTACCTACATACATGACCATTCCCGAAACGGAACGTACGTAAACGGGCGACTGATTGGGCCGAACAAATGCATGATCCTGCAAGCACAACGATATCATCTCGATCGCGGGCGTCAGCATACGGGCCTTCGTGTACTACGATCTGCGGTACAGCA]

[+] EMBL BM602168             [CCGCTGAATGCTGCGCACAGCAAAATTTTATCCAAAATAACCTCTTCCGACCGTGCAGTGCAGTGGGCGAGCGTTTGTGTTGAGCCGTTCGAACTGTTGTCTATTGACCGGCACTAGGAATCAAGTGTATAGTGTGCTGTACTACCGCACGGGGTCGTGATTTTTATTCCTTTCTGCAAGCAAAAGCAATATTAAAACATCATCAAACGAAGCGACATGGCAAACAGTGAAGCAATTCTGGACACACAGACGGCCACCCAGACCCAGATGACGCAAGATACGGCGCTGGAAAGTCAACCGATCGAGCACCCTAGCTATGGCCAGCTGCTGGGCAAGCATGTGAAAATGAAAAGCCTCGACCTGCGCCACAGTGAGTTTAAGGTGGGACGAGAAGGCACATGCCATCTGATCTTGGATGAAGACAACCTTCCGCCCTCCAAGTTGTGCCGAATTTCGAAGCACCACTTCACGATCAAGAAGGATCTGAACGACACAACCAGCCCTACCTACATACATGACCATTCCCGAAACGGAACGTACGTAAACGGGCGACTGATTGGGCCGAACAAATGCATGATCCTGCAAGCACAACGATATCATCTCGATCGCGGGCGTCAGCATACGGGCCTTCGTGTACTACGATCTGCGGTACAGCA]


>consensus_2199#1 CCGCTGAATGCTGCGCACAGCAAAATTTTATCCAAAATAACCTCTTCCGACCGTGCAGTG CAGTGGGCGAGCGTTTGTGTTGAGCCGTTCGAACTGTTGTCTATTGACCGGCACTAGGAA TCAAGTGTATAGTGTGCTGTACTACCGCACGGGGTCGTGATTTTTATTCCTTTCTGCAAG CAAAAGCAATATTAAAACATCATCAAACGAAGCGACATGGCAAACAGTGAAGCAATTCTG GACACACAGACGGCCACCCAGACCCAGATGACGCAAGATACGGCGCTGGAAAGTCAACCG ATCGAGCACCCTAGCTATGGCCAGCTGCTGGGCAAGCATGTGAAAATGAAAAGCCTCGAC CTGCGCCACAGTGAGTTTAAGGTGGGACGAGAAGGCACATGCCATCTGATCTTGGATGAA GACAACCTTCCGCCCTCCAAGTTGTGCCGAATTTCGAAGCACCACTTCACGATCAAGAAG GATCTGAACGACACAACCAGCCCTACCTACATACATGACCATTCCCGAAACGGAACGTAC GTAAACGGGCGACTGATTGGGCCGAACAAATGCATGATCCTGCAAGCACAACGATATCAT CTCGATCGCGGGCGTCAGCATACGGGCCTTCGTGTACTACGATCTGCGGTACAGCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2199#0      ANCACCAGCAGATACCCGCTTTAGCACAGAAATTTTATCCCCAAAATAAC-TCTTCCGTA 59
consensus_2199#1      ----CCGCTGAATGCTGCGCACAGCA---AAATTTTATC--CAAAATAACCTCTTCCGAC 51
                          **     ** *       ****   **********  ********* *******  

consensus_2199#0      CGCGCA-TGCAGTGGACGAGCGTTTGTGTTGAGCCGTTCGAACTGTTGTCTATTGACCGG 118
consensus_2199#1      CGTGCAGTGCAGTGGGCGAGCGTTTGTGTTGAGCCGTTCGAACTGTTGTCTATTGACCGG 111
                      ** *** ******** ********************************************

consensus_2199#0      GGACTAGAATCAAGTGTATTGTGTGCTGNACTAACGGACGGGGCCGTGATTTTTATTCCT 178
consensus_2199#1      CACTAGGAATCAAGTGTATAGTGTGCTGTACTACCGCACGGGGTCGTGATTTTTATTCCT 171
                            ************* ******** **** ** ****** ****************

consensus_2199#0      TTCTTGGAAGCAAACGAAATATTAAAACATCATCCAACGGAAAGGACCATGGCGAAACAG 238
consensus_2199#1      TTCT-GCAAGCAAAAGCAATATTAAAACATCATCAAACGAAGCGA--CATGGC-AAACAG 227
                      **** * ******* * ***************** **** *  *   ****** ******

consensus_2199#0      TGAAGCCAATCTTGGACCACAACCAGGAACGGGGCAGNCAGGAACCCAGGATT--GTAAT 296
consensus_2199#1      TGAAGCAATTCTGGACACACAGACGGCCACCCAGACCCAGATGACGCAAGATACGGCGCT 287
                      ****** * *** *   ****  * *  **   *         ** ** ***   *   *

consensus_2199#0      GCAAGGATTACCGGGCTGCTGGAAAAGGTTCAAACGGCATTCGGAGCCAGCCCCTAAGAC 356
consensus_2199#1      GGAAAGTCAACCGATCGAGCACCCTAGCTATGGCCAGC-TGCTGGGCAAGCATGTGAAAA 346
                      * ** *   ****  *         ** *     * ** * * * ** ***   * * * 

consensus_2199#0      TTAATNTGGTCCAGACTNTTGGGGNCACAAGCACTGTGTGCACACAATTGNANACAAAGG 416
consensus_2199#1      TGAAAA--GCCTCGACCT---GCGCCACAGTGAGTTTAAGGTGGGACGAGAAGGCACATG 401
                      * **    * *  ***     * * ****   * * *  *     *   * *  ** * *

consensus_2199#0      CCCTCGGGTACTTCACAAAAATTNCCAACGTTCCTAACGTTANTCTNCGGTTGGTTCCCG 476
consensus_2199#1      CCATCTGATCTTGGATGAAGA----CAACCTTCCGCCCTCCAAGTTGTGCCGAATTTCGA 457
                      ** ** * *  *  *  ** *    **** ****   *   *   *  *     ** *  

consensus_2199#0      GACTTAATATATTCTTAAGGGAACACCTTGGCNGGCCCACAAGGTGGAAGGTATCTTCAA 536
consensus_2199#1      AGCACCACTTCACGATCAAGAAGGATCTGAACGACACAACCAGCCCTACC-TACATACAT 516
                        *   *  *     * * * *  * **   *    * ** **    *   **  * ** 

consensus_2199#0      AGCGGATTGGGTGA--ACCNGCAACAAAANGGGCACACCATTGGCCCCATACCTGGCATT 594
consensus_2199#1      GACCATTCCCGAAACGGAACGTACGTAAACGGGCGACTGATTGGGCCGAACAAATGCATG 576
                        *   *   *  *      * *   *** ****     ***** ** *      **** 

consensus_2199#0      CCTCGGGGGNATTGACAAAGGACAAAACCTTTACCAGGCACCTTCCCAAAAGNATATGGT 654
consensus_2199#1      ATCCTGCAAGCACAAC----GATATCATCTCGATCGCGGGCGTCAGCATACGGGCCTTCG 632
                         * *        **    ** *  * **  * *  *  * *   ** * *    *   

consensus_2199#0      AGGGCCGACANACTATCCGCAACAGGNACACTTCAANCATNTACAACCNGAATACACAAA 714
consensus_2199#1      TGTAC---TACGATCTGCGGTACAGCA--------------------------------- 656
                       *  *    *   * * **  ****                                   

consensus_2199#0      GAGAAAGCGGAATTACTTGAACACGGAAAGAAAGACCANGTGCCTNAAACATAACCAGTA 774
consensus_2199#1      ------------------------------------------------------------
                                                                                  

consensus_2199#0      ANNATTGTNACCNTGATCCCCGTCACACAANAGCAANACACNGCAAACCCGCACAAAACA 834
consensus_2199#1      ------------------------------------------------------------
                                                                                  

consensus_2199#0      NCCGCCAACCCGAGAATAGGGGGACNCCGCNCCACCAAACAAAGGCCCTNAAGAACCCCC 894
consensus_2199#1      ------------------------------------------------------------
                                                                                  

consensus_2199#0      GNGAAACNCCANACAAAGACAGACNCACACCCACCNAAAACCACNCGCCAANGAACNNAA 954
consensus_2199#1      ------------------------------------------------------------
                                                                                  

consensus_2199#0      CAACANGACATAAACGGGACCACACGNACGAGAAACCCAANAACACGACACTGNCCGGAA 1014
consensus_2199#1      ------------------------------------------------------------
                                                                                  

consensus_2199#0      CCAACACCANCCGCACNACCCGGACCATAAAAACGCGCCCNACNCNAACCNCGACAGAGC 1074
consensus_2199#1      ------------------------------------------------------------
                                                                                  

consensus_2199#0      AACGCACGNANCNCNACACACAGACACGACAAANNCGCGCANACCAGCCCA 1125
consensus_2199#1      ---------------------------------------------------
                                                                         




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)