These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2205#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 416 fasta sequence [CGACGATCAGCAGTACTTTCCGTGCGATGCCAAGGCGATCCAGTGGAACAGCTTCCTGGATCATCAGATCAAGGGACTGCGGCAGTACCTGATGCGCGATCCGTGGAGCACGTTGGAGAAATCGGTGCGCCGCCATCGGTTGCGAACGTTTGCGCACTGGTGTCTGCTGGCGGTGCTGTACGGTGGAATGCTGTACTTGGTGGTGAAGGTACTGCACGCGTACGGGTACATTGATTTTACGGGTTTGCATGAGAGCAACTTGGAGGAGTGTCTAGAAGCGGAAGCTATATGAAAAGGGGAAGACGAGGTGCAGGGTGTTTTTGCGTAGGATAGGAACTAGATGAAATGCGCTTTCCTAGAGAGCGTAGACCCCAGGTAAGGACATGGTGTTATTAGGTCTTCTAGCGACATTTTTT] [+] EMBL BM599510 [CGACGATCAGCAGTACTTTCCGTGCGATGCCAAGGCGATCCAGTGGAACAGCTTCCTGGATCATCAGATCAAGGGACTGCGGCAGTACCTGATGCGCGATCCGTGGAGCACGTTGGAGAAATCGGTGCGCCGCCATCGGTTGCGAACGTTTGCGCACTGGTGTCTGCTGGCGGTGCTGTACGGTGGAATGCTGTACTTGGTGGTGAAGGTACTGCACGCGTACGGGTACATTGATTTTACGGGTTTGCATGAGAGCAACTTGGAGGAGTGTCTAGAAGCGGAAGCTATATGAAAAGGGGAAGACGAGGTGCAGGGTGTTTTTGCGTAGGATAGGAACTAGATGAAATGCGCTTTCCTAGAGAGCGTAGACCCCAGGTAAGGACATGGTGTTATTAGGTCTTCTAGCGACATTTTTT] consensusID : consensus_2205#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 406 fasta sequence [CGACGATCAGCAGTACTTCCCGTGCGATGCCAAGGCGATCCAGTGGAACAGCGTTCCTGGATCATCAGATCAAGGGACTGCGGCAGTACCTGATGCGCGATCCGTGGAGCACGTTGGAGAAATCGGTGCGCCGGCATCGGTTGCGAACGTTTGCGCACTGGTGTCTGCTGGGCGGTTGCTTGTACGGTGGGGATGCGTGTACTTGGTGGGTTGAAAGGTACTGCNACCGCCGTACGGGTACATCGATTTTACCGGGGACTTGCATTTGAAGAAGCCAACCTTTTGGACGGAAGGTTGGTCATAGCANGGCGGGAAANGCNTAATATTGAAAAAAGGGGGGAAAGAAGGAAAGTGTTGCCAGGGGTGGTACACAAGGAGTTAAGGNATAAGGGAAACTTAGATTTCA] [+] EMBL BX468176 [CGACGATCAGCAGTACTTCCCGTGCGATGCCAAGGCGATCCAGTGGAACAGCGTTCCTGGATCATCAGATCAAGGGACTGCGGCAGTACCTGATGCGCGATCCGTGGAGCACGTTGGAGAAATCGGTGCGCCGGCATCGGTTGCGAACGTTTGCGCACTGGTGTCTGCTGGGCGGTTGCTTGTACGGTGGGGATGCGTGTACTTGGTGGGTTGAAAGGTACTGCNACCGCCGTACGGGTACATCGATTTTACCGGGGACTTGCATTTGAAGAAGCCAACCTTTTGGACGGAAGGTTGGTCATAGCANGGCGGGAAANGCNTAATATTGAAAAAAGGGGGGAAAGAAGGAAAGTGTTGCCAGGGGTGGTACACAAGGAGTTAAGGNATAAGGGAAACTTAGATTTCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2205#0 CGACGATCAGCAGTACTTTCCGTGCGATGCCAAGGCGATCCAGTGGAACAGC-TTCCTGG 59 consensus_2205#1 CGACGATCAGCAGTACTTCCCGTGCGATGCCAAGGCGATCCAGTGGAACAGCGTTCCTGG 60 ****************** ********************************* ******* consensus_2205#0 ATCATCAGATCAAGGGACTGCGGCAGTACCTGATGCGCGATCCGTGGAGCACGTTGGAGA 119 consensus_2205#1 ATCATCAGATCAAGGGACTGCGGCAGTACCTGATGCGCGATCCGTGGAGCACGTTGGAGA 120 ************************************************************ consensus_2205#0 AATCGGTGCGCCGCCATCGGTTGCGAACGTTTGCGCACTGGTGTCTGCTGG-CGGTG--C 176 consensus_2205#1 AATCGGTGCGCCGGCATCGGTTGCGAACGTTTGCGCACTGGTGTCTGCTGGGCGGTTGCT 180 ************* ************************************* **** consensus_2205#0 TGTACGGTGGA-ATGC-TGTACTTGGTGGT---GAAGGTACTGCA--CGC-GTACGGGTA 228 consensus_2205#1 TGTACGGTGGGGATGCGTGTACTTGGTGGGTTGAAAGGTACTGCNACCGCCGTACGGGTA 240 ********** **** ************ ********** *** ********* consensus_2205#0 CATTGATTTTAC---GGGTTTGCATGAGAGCAACTTGGAGGAGTGTCTAGAAGCGGAAGC 285 consensus_2205#1 CATCGATTTTACCGGGGACTTGCATTTGAAGAAGCC-----AACCTTTTGGA-CGGAAGG 294 *** ******** ** ****** ** ** * * * * * ****** consensus_2205#0 TATATGAAAAGGGGAAGACGAGGTGCAGGGTGTTTTTGCGTAGGATAGGAACTAGATGAA 345 consensus_2205#1 T---TGGTCATAGCANGGCGGGAAANGCNTAATATTGAAAAAAGGGGGGAA--AGAAGGA 349 * ** * * * * ** * * ** * * **** *** * * consensus_2205#0 ATGCGCTTTCCTAGAGAGCGTAGACCCCAGGTAAGGACATGGTGTTA--TTAGGTCTTCT 403 consensus_2205#1 AAGTG--TTGCCAGGGGTGGTACACAAGGAGTTAAGGNATAAGGGAAACTTAGATTTCA- 406 * * * ** * ** * *** ** ** * * ** * * **** * * consensus_2205#0 AGCGACATTTTTT 416 consensus_2205#1 ------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||