These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2262#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 537 fasta sequence [CCGGCTGCTACTGCTCGCTGTCGAAAGTTTCTCGCGGGCACAGGCAGCGGCCAATGATTACCCTGCCCAGCAGCACCAGCACCTGAGAAATCAGCAGCATCACCAGCACCAACATCACCACAGACACCGAACGGCCGAGCCGAGCAGGAGTCGGAACCAGACGTCCTTAAACTACGCGCTAATAAGTGGCCCCGGGAGCGTGGGTAATGGAGGGAGCGATTATCGGCCACCGTACCAGTACCCGGGCACTACTGGACAGCAGCACTGGGGGAACCATCACGGGAACCAGCCGCAACACCATCATCGCGAGACGCCACCGCAGCATCGGCGCCATCATCGCGGTCAGGCCCATCCTTCCCATTCGCAGCCGTCATCGCCGCCGGGAGCGGCTGGCTGGCGCAGGACATCCGGGAATGGTGGTGTGCCAGCGGCACGTCCGGTCACCCGTATGCTTACGCGCAGTGGGACGGTTGGAAGTGCGCGCCACAACAACAGTACGAGTGGCAAAAACGTGTGCACCGTGCATGTGTATCGCAA] [+] EMBL BM657578 [CCGGCTGCTACTGCTCGCTGTCGAAAGTTTCTCGCGGGCACAGGCAGCGGCCAATGATTACCCTGCCCAGCAGCACCAGCACCTGAGAAATCAGCAGCATCACCAGCACCAACATCACCACAGACACCGAACGGCCGAGCCGAGCAGGAGTCGGAACCAGACGTCCTTAAACTACGCGCTAATAAGTGGCCCCGGGAGCGTGGGTAATGGAGGGAGCGATTATCGGCCACCGTACCAGTACCCGGGCACTACTGGACAGCAGCACTGGGGGAACCATCACGGGAACCAGCCGCAACACCATCATCGCGAGACGCCACCGCAGCATCGGCGCCATCATCGCGGTCAGGCCCATCCTTCCCATTCGCAGCCGTCATCGCCGCCGGGAGCGGCTGGCTGGCGCAGGACATCCGGGAATGGTGGTGTGCCAGCGGCACGTCCGGTCACCCGTATGCTTACGCGCAGTGGGACGGTTGGAAGTGCGCGCCACAACAACAGTACGAGTGGCAAAAACGTGTGCACCGTGCATGTGTATCGCAA] consensusID : consensus_2262#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 535 fasta sequence [TCGAGGCAGAATTGCCCCGCGNCTCATATTCNGTCTNTTCTGTTTCATTGCNTCGGATAGACGTCTTAAACTACGCGCTAATAAGTGGCCCGGGAGCGTGGGTAATGGAGGGAGCGATTATCGGCACCGTACCAGTACCCCCCCCCAGGGGGCACTACTTGGACAGCAGCACTGGGGGAAAACCCCAATCACACCCTGGATGGGTTGTAAACAACTCCAAAGNTTCTCCCGGNTGCCCTAAAAAAAAATCCGAAAAACCGTCCATAAAGTTNTCGCAAAGATTTCCAGGTGCCCGGGTAANGGTGAATCAGGTCNCCAAGATCCNCAGGATGCNANAGGACGAAAGTTACTGAGGNCAGGCCCCAAGTTACAATACCCAGAGCGTGTAGGGTTTCCCAANGGGGACCACGCCAAAATNCCTCGTTTGAGTCGTCNCCAAGTTATCCAGGACTAAAGGCCCCCTGGGTNCGAAGTTGCAACGGAGCCAGGCCCCTGGTGGAGTANGGACTGGAGGCGCATTTGGTGTCTCTTTTGG] [+] EMBL AL696850 [TCGAGGCAGAATTGCCCCGCGNCTCATATTCNGTCTNTTCTGTTTCATTGCNTCGGATAGACGTCTTAAACTACGCGCTAATAAGTGGCCCGGGAGCGTGGGTAATGGAGGGAGCGATTATCGGCACCGTACCAGTACCCCCCCCCAGGGGGCACTACTTGGACAGCAGCACTGGGGGAAAACCCCAATCACACCCTGGATGGGTTGTAAACAACTCCAAAGNTTCTCCCGGNTGCCCTAAAAAAAAATCCGAAAAACCGTCCATAAAGTTNTCGCAAAGATTTCCAGGTGCCCGGGTAANGGTGAATCAGGTCNCCAAGATCCNCAGGATGCNANAGGACGAAAGTTACTGAGGNCAGGCCCCAAGTTACAATACCCAGAGCGTGTAGGGTTTCCCAANGGGGACCACGCCAAAATNCCTCGTTTGAGTCGTCNCCAAGTTATCCAGGACTAAAGGCCCCCTGGGTNCGAAGTTGCAACGGAGCCAGGCCCCTGGTGGAGTANGGACTGGAGGCGCATTTGGTGTCTCTTTTGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2262#0 ---------------CCGGCTGCTACTGCTCGCTGTCGAAAGTTTCTCGCGGGCACAGGC 45 consensus_2262#1 TCGAGGCAGAATTGCCCCGCGNCTCATATTC--NGTCTNTTCTGTTTCATTGCNTCGGAT 58 ** ** ** * ** *** * * ** * * * consensus_2262#0 AGCGGCCAATGATTACCC--TGCCCAGCAGCACCAGCACCTGAGAAATCAGCAGCATCAC 103 consensus_2262#1 AGACGTCTTAAACTACGCGCTAATAAGTGGCCCGGGAGCGTGGGTAATGGAGGGAGCGAT 118 ** * * * *** * * ** ** * * * ** * *** * * consensus_2262#0 CAGCACCAACATCACCACAGACACCGAACGGCCGAGCCGAGCAGGAGTCGGAACCAGACG 163 consensus_2262#1 TATCGGCACCGT-ACCA-GTACCCC---CCCCCAGG--GGGCACTACTTGGA--CAGCAG 169 * * ** * * **** ** ** * ** * * *** * * *** *** * consensus_2262#0 TCCTTAAACTACGCGCTAATAAGTGGCCCCGGGAGCGTGGGTAATGGAGGGAGCGATTAT 223 consensus_2262#1 CACTGGGGGAAAACCCCAATCAC--ACCCTGGATGGGTTGTAAACAACTCCAAAGNTTCT 227 ** * * * *** * *** ** * ** * ** * * ** * consensus_2262#0 C--GGCCACCGTACCAGTACCCGGGCACTACTGGACA-GCAGCACTGGGGGAACCATCAC 280 consensus_2262#1 CCCGGNTGCCCTAAAAAAAAATCCGAAAAACCGTCCATAAAGTTNTCGCAAAGATTTCCA 287 * ** ** ** * * * * ** * ** ** * * * ** consensus_2262#0 GGGAACCAGCCGCAACACCATCA--TCGCGAGACGCCACCGCA-GCATCGGCGCCATCAT 337 consensus_2262#1 GGTGCCCGGGTAANGGTGAATCAGGTCNCCAAGATCCNCAGGATGCNANAGGACGAAAGT 347 ** ** * **** ** * * ** * * * ** * * * * consensus_2262#0 CGCGGTCAGGCCCATCCTTCCCATTCGCAGCCGTCATCGCCGCCGGGAGCGGCTGGCTGG 397 consensus_2262#1 TAC--TGAGGNCAGGCC--CCAAGTTACAATACCCAGAG----CGTGTAGGGTTTCCCAA 399 * * *** * ** ** * * ** ** * ** * ** * * consensus_2262#0 CGCAGGACATCCGGGAATGGTGGTGTGCCAGCGGCACGTCCGGTCACCCGTATGCTTACG 457 consensus_2262#1 NGGGGACCACGCCAAAATNCCT-CGTTTGAGTCGT-CNCCAAGTTATCCAGGACTAAAGG 457 * * ** * *** ** ** * * * ** * ** * * consensus_2262#0 CGCAGTGGGACGGTTGGAAGTGCGCGCCACAACAACAGTACGAGTGGCAAAAACGTGTGC 517 consensus_2262#1 CCCCCTGGGTNCGAAGTTGCAACGGAGCCAGGCCCCTGGTGGAGTANGGACTGGAGGCGC 517 * * **** * * ** * * * * **** * * ** consensus_2262#0 ACCGTGCATGTGTATCGCAA 537 consensus_2262#1 ATTTGGTGTCTCTTTTGG-- 535 * * * * * * * |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||