These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2271#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 687 fasta sequence [CCGGATTCCACTACCGCTGATGGAGCGGGATGAGCTGCTGCAACCGCTCACAGAGCGTGCCGTAACGGAGCAGCGACAGCGCACCACGGTTGAGAAGGGTCTCCGCCCCATGAAGGACATTGCCGACGCGCTGTTGCTCGAGCTCGAAGGAGACGACAGCGAACCTTCGGACCGAACCGCTTTGCTGAGCTATTCCGAGAAGGAACCACTGATGGGTGACTTCCTTCAGGAGAAGCCAAAGAGCTCCGCCAAAGAGTTCCTACGCATCACCTTCCGGATACCAGCCACCCTCGCGGTGCTCTGCGTGACGAATCTGTTCTGCTGGATGAGCCACATCAGCTACTCGCTGTACTTTACCGACTTTGTGGGCGAGAAGGTGTTCGGTGGCGATCCGATGGCCCACTCCGATTCGGACGAGTACGCGCTCTACATCGAAGGCGTCCGGTACGGGTGCTTCGGGATGGCCATCTACTCGATCGCCTGCTCGACGTACTCGTGCACGATCGAGCGGCTGATCCGGGTGTTCCGGGCGCGCAACGTGTACAGCGGAGGGCTGCTGATCGACTTCGTCGGCATGCTGCTGATGGCCATGTTCCCGAGCAAGGTGACGGTGTACGTGTTCAGCGTGACGGGCGGTATAGTCGGAGCGCTGCTCTTCACCATGCCGTACATCATACTGGCGAAGTA] [+] EMBL BM634569 [CCGGATTCCACTACCGCTGATGGAGCGGGATGAGCTGCTGCAACCGCTCACAGAGCGTGCCGTAACGGAGCAGCGACAGCGCACCACGGTTGAGAAGGGTCTCCGCCCCATGAAGGACATTGCCGACGCGCTGTTGCTCGAGCTCGAAGGAGACGACAGCGAACCTTCGGACCGAACCGCTTTGCTGAGCTATTCCGAGAAGGAACCACTGATGGGTGACTTCCTTCAGGAGAAGCCAAAGAGCTCCGCCAAAGAGTTCCTACGCATCACCTTCCGGATACCAGCCACCCTCGCGGTGCTCTGCGTGACGAATCTGTTCTGCTGGATGAGCCACATCAGCTACTCGCTGTACTTTACCGACTTTGTGGGCGAGAAGGTGTTCGGTGGCGATCCGATGGCCCACTCCGATTCGGACGAGTACGCGCTCTACATCGAAGGCGTCCGGTACGGGTGCTTCGGGATGGCCATCTACTCGATCGCCTGCTCGACGTACTCGTGCACGATCGAGCGGCTGATCCGGGTGTTCCGGGCGCGCAACGTGTACAGCGGAGGGCTGCTGATCGACTTCGTCGGCATGCTGCTGATGGCCATGTTCCCGAGCAAGGTGACGGTGTACGTGTTCAGCGTGACGGGCGGTATAGTCGGAGCGCTGCTCTTCACCATGCCGTACATCATACTGGCGAAGTA] consensusID : consensus_2271#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 251 fasta sequence [GAATGNCNGAGGNTNANAGCGCACACGGGTTGAGAAGGGTTCGCCATGAAGGACATTGCGACGCGCTGTTGTCGAGCTCGAAGGAGAGACAGCGAACTTCGGACGAACGTTTGTGAGCTATTCCGAGAAGGAACACTGATGGGTGACTTCTTCAGGAGAAGCAAGAGCTCGCAAAGAGTTCTAGCATACTTCGGATACAGCACCCTCGCGGTGCTCTGCGTGACGAATCTGTCTGGTGGATGAGCAATATA] [+] EMBL AL696920 [GAATGNCNGAGGNTNANAGCGCACACGGGTTGAGAAGGGTTCGCCATGAAGGACATTGCGACGCGCTGTTGTCGAGCTCGAAGGAGAGACAGCGAACTTCGGACGAACGTTTGTGAGCTATTCCGAGAAGGAACACTGATGGGTGACTTCTTCAGGAGAAGCAAGAGCTCGCAAAGAGTTCTAGCATACTTCGGATACAGCACCCTCGCGGTGCTCTGCGTGACGAATCTGTCTGGTGGATGAGCAATATA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2271#0 CCGGATTCCACTACCGCTGATGGAGCGGGATGAGCTGCTGCAACCGCTCACAGAGCGTGC 60 consensus_2271#1 -----------------------------------------------------------G 1 consensus_2271#0 CGTAACGGAGCAGCGACAGCGCACCACGGTTGAGAAGGGTCTCCGCCCCATGAAGGACAT 120 consensus_2271#1 AATGNCNGAG-GNTNANAGCGCACACGGGTTGAGAAGGGTT----CGCCATGAAGGACAT 56 * * *** * ******* ************* * ************* consensus_2271#0 TGCCGACGCGCTGTTGCTCGAGCTCGAAGGAGACGACAGCGAACCTTCGGACCGAACCGC 180 consensus_2271#1 TGC-GACGCGCTGTTG-TCGAGCTCGAAGGAGA-GACAGCGAAC-TTCGGAC-GAACG-- 109 *** ************ **************** ********** ******* **** consensus_2271#0 TTTGCTGAGCTATTCCGAGAAGGAACCACTGATGGGTGACTTCCTTCAGGAGAAGCCAAA 240 consensus_2271#1 TTTG-TGAGCTATTCCGAGAAGGAAC-ACTGATGGGTGACTTC-TTCAGGAGAAGC--AA 164 **** ********************* **************** ************ ** consensus_2271#0 GAGCTCCGCCAAAGAGTTCCTACGCATCACCTTCCGGATACCAGCCACCCTCGCGGTGCT 300 consensus_2271#1 GAGCTC--GCAAAGAGTTCTAGCATAC-----TTCGGATACAG--CACCCTCGCGGTGCT 215 ****** ********** * * * ******* *************** consensus_2271#0 CTGCGTGACGAATCTGTTCTGCTGGATGAGCCACATCAGCTACTCGCTGTACTTTACCGA 360 consensus_2271#1 CTGCGTGACGAATCTGT-CTGGTGGATGAGCAATATA----------------------- 251 ***************** *** ********* * ** consensus_2271#0 CTTTGTGGGCGAGAAGGTGTTCGGTGGCGATCCGATGGCCCACTCCGATTCGGACGAGTA 420 consensus_2271#1 ------------------------------------------------------------ consensus_2271#0 CGCGCTCTACATCGAAGGCGTCCGGTACGGGTGCTTCGGGATGGCCATCTACTCGATCGC 480 consensus_2271#1 ------------------------------------------------------------ consensus_2271#0 CTGCTCGACGTACTCGTGCACGATCGAGCGGCTGATCCGGGTGTTCCGGGCGCGCAACGT 540 consensus_2271#1 ------------------------------------------------------------ consensus_2271#0 GTACAGCGGAGGGCTGCTGATCGACTTCGTCGGCATGCTGCTGATGGCCATGTTCCCGAG 600 consensus_2271#1 ------------------------------------------------------------ consensus_2271#0 CAAGGTGACGGTGTACGTGTTCAGCGTGACGGGCGGTATAGTCGGAGCGCTGCTCTTCAC 660 consensus_2271#1 ------------------------------------------------------------ consensus_2271#0 CATGCCGTACATCATACTGGCGAAGTA 687 consensus_2271#1 --------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||