These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_238#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 747 fasta sequence [CCCCGAGGTAATGTCGGAAGTGTTGCGCGACTTTCCCCGAGCTGTCGTGTCGAGATTGACGGTGTGACCGAGTCGATCATGAAGCGTACCGCGCTGGTGGCCAACACCTCGAACATGCCTGTCGCTGCTCGTGAAGCTTCCATCTACACCGGTATTACGCTGTCGGAGTACTTCCGCGACATGGGCTACAACGTGTCGATGATGGGCGATTCCACTCCCGTTGGGCTGAGGCGCTGCGAGAAATCTCCGGCGTCTGGCGGAGATGCCGGCGATTCCGGCTACCCGGCTACCTGGGCGCCCGACTCGCCTCGTTCTACGAGCGCGCCGGTCGCGTCAAGTGTCTCGGCAATCCGGAGCGCGAAGGTTCCGTGTCGATCGTCGGTGCCGTCTCGCCGCCCGGTGGTGATTTCTCCGATCCCGTCACTTCCGGCACGCTCGGCATTGTGCAGGTGTACTGGGGCTTGGACAAGAAGCTGGGCCAGCGTAAAGCACTTCCCTCGATCACCTGGTTGATTTCGTACAGAAGTACATGCGCGCACTGGAAGATTCTACGACCACGAAACTTTCCCGGGCAGGTNTGGTGCCGAATGCGGTACCAAGGGGTGAAGGCAAATCCTTGCAGGGCAGGAAGGAGGGATCTTGGTCCGNAAATCGTGCCAGCTCGTCGGGGTTAGGGCGTCGCTGGGCCGAAGAACGGGACCNAGATCACGCTTCGAAGGTACGCCCAAGCTGTTNNNAGGACGAATT] [+] EMBL AL929682 [CCCCGAGGTAATGTCGGAAGTGTTGCGCGACTTTCCCCGAGCTGTCGTGTCGAGATTGACGGTGTGACCGAGTCGATCATGAAGCGTACCGCGCTGGTGGCCAACACCTCGAACATGCCTGTCGCTGCTCGTGAAGCTTCCATCTACACCGGTATTACGCTGTCGGAGTACTTCCGCGACATGGGCTACAACGTGTCGATGATGGGCGATTCCACTCCCGTTGGGCTGAGGCGCTGCGAGAAATCTCCGGCGTCTGGCGGAGATGCCGGCGATTCCGGCTACCCGGCTACCTGGGCGCCCGACTCGCCTCGTTCTACGAGCGCGCCGGTCGCGTCAAGTGTCTCGGCAATCCGGAGCGCGAAGGTTCCGTGTCGATCGTCGGTGCCGTCTCGCCGCCCGGTGGTGATTTCTCCGATCCCGTCACTTCCGGCACGCTCGGCATTGTGCAGGTGTACTGGGGCTTGGACAAGAAGCTGGGCCAGCGTAAAGCACTTCCCTCGATCACCTGGTTGATTTCGTACAGAAGTACATGCGCGCACTGGAAGATTCTACGACCACGAAACTTTCCCGGGCAGGTNTGGTGCCGAATGCGGTACCAAGGGGTGAAGGCAAATCCTTGCAGGGCAGGAAGGAGGGATCTTGGTCCGNAAATCGTGCCAGCTCGTCGGGGTTAGGGCGTCGCTGGGCCGAAGAACGGGACCNAGATCACGCTTCGAAGGTACGCCCAAGCTGTTNNNAGGACGAATT] consensusID : consensus_238#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 178 fasta sequence [CCGCCCACGCGTCCGGAGCGTGGTAACGAGATGTCGGAAGTGTTGCGCGATTTCCCCGAGCTGTCGGTCGAGATTGACGGTGTGACCGAGTCGATCATGAAGCGTACCGCGCTGGTCGCCAACACCTCGAACATGCCTGTCGCTGCTCGTGAAGCTTCCATCTACACCGGTATTACGC] [+] EMBL BM623401 [CCGCCCACGCGTCCGGAGCGTGGTAACGAGATGTCGGAAGTGTTGCGCGATTTCCCCGAGCTGTCGGTCGAGATTGACGGTGTGACCGAGTCGATCATGAAGCGTACCGCGCTGGTCGCCAACACCTCGAACATGCCTGTCGCTGCTCGTGAAGCTTCCATCTACACCGGTATTACGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_238#0 --------------------CCCCGAGGTAATGTCGGAAGTGTTGCGCGACTTTCCCCGA 40 consensus_238#1 CCGCCCACGCGTCCGGAGCGTGGTAACGAGATGTCGGAAGTGTTGCGCGA-TTTCCCCGA 59 * * ******************** ********* consensus_238#0 GCTGTCGTGTCGAGATTGACGGTGTGACCGAGTCGATCATGAAGCGTACCGCGCTGGTGG 100 consensus_238#1 GCTGTCG-GTCGAGATTGACGGTGTGACCGAGTCGATCATGAAGCGTACCGCGCTGGTCG 118 ******* ************************************************** * consensus_238#0 CCAACACCTCGAACATGCCTGTCGCTGCTCGTGAAGCTTCCATCTACACCGGTATTACGC 160 consensus_238#1 CCAACACCTCGAACATGCCTGTCGCTGCTCGTGAAGCTTCCATCTACACCGGTATTACGC 178 ************************************************************ consensus_238#0 TGTCGGAGTACTTCCGCGACATGGGCTACAACGTGTCGATGATGGGCGATTCCACTCCCG 220 consensus_238#1 ------------------------------------------------------------ consensus_238#0 TTGGGCTGAGGCGCTGCGAGAAATCTCCGGCGTCTGGCGGAGATGCCGGCGATTCCGGCT 280 consensus_238#1 ------------------------------------------------------------ consensus_238#0 ACCCGGCTACCTGGGCGCCCGACTCGCCTCGTTCTACGAGCGCGCCGGTCGCGTCAAGTG 340 consensus_238#1 ------------------------------------------------------------ consensus_238#0 TCTCGGCAATCCGGAGCGCGAAGGTTCCGTGTCGATCGTCGGTGCCGTCTCGCCGCCCGG 400 consensus_238#1 ------------------------------------------------------------ consensus_238#0 TGGTGATTTCTCCGATCCCGTCACTTCCGGCACGCTCGGCATTGTGCAGGTGTACTGGGG 460 consensus_238#1 ------------------------------------------------------------ consensus_238#0 CTTGGACAAGAAGCTGGGCCAGCGTAAAGCACTTCCCTCGATCACCTGGTTGATTTCGTA 520 consensus_238#1 ------------------------------------------------------------ consensus_238#0 CAGAAGTACATGCGCGCACTGGAAGATTCTACGACCACGAAACTTTCCCGGGCAGGTNTG 580 consensus_238#1 ------------------------------------------------------------ consensus_238#0 GTGCCGAATGCGGTACCAAGGGGTGAAGGCAAATCCTTGCAGGGCAGGAAGGAGGGATCT 640 consensus_238#1 ------------------------------------------------------------ consensus_238#0 TGGTCCGNAAATCGTGCCAGCTCGTCGGGGTTAGGGCGTCGCTGGGCCGAAGAACGGGAC 700 consensus_238#1 ------------------------------------------------------------ consensus_238#0 CNAGATCACGCTTCGAAGGTACGCCCAAGCTGTTNNNAGGACGAATT 747 consensus_238#1 ----------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||