These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2413#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 637 fasta sequence [CCGCGGACGCGTGGCAAGCTACACCGTGTTCTGGTGCAATACGACTAGCAACTCTCCGAACGATTGCAATGGATCCATAAACTTTACCAGTGTTGCCGCCGACCAGACCACTTTCGTGCTGAGCGATGTTGGGTCTACGATTAACTTTGCGGTAGCGGCTAACGCTGGGCGTGTGTCGTCGGGGATGGTGTGGGCAGCGTGTACAGCTACGCACAAAACCGACATTGGCAAACTGAAAACTATCTGGATCAGTGAGATGGATTCGTCGCAAATTCATCTCAAGTGGAAAACGGAATGCGTTGATGTGGCACATGTGGGATACATGATCTACTACTGTTCGATCTCGTCTCCACGTACGCTCGGCTGCAAGGAACCAGAGATGAAGATTAATGTGACGGATAAGACTCTGGACCACTTTCTGTTGGAAAATCTCCATCCATATGTGACATACAAAATTGAAATTGCCATGTACTCCGATACGCACATTGGGCCACGCAGCGTGCCGTTAGTAAATACTACTATGGAAGCAGCTCCATCACCGCCACGAAACTTAGTAACGGAAAGAGTAACAAATAACAGTATATCCCTCCACTGGGGAACCTCCGGCACACATAAACGGTGGAAAGATGTTCTACTG] [+] EMBL BM596632 [CCGCGGACGCGTGGCAAGCTACACCGTGTTCTGGTGCAATACGACTAGCAACTCTCCGAACGATTGCAATGGATCCATAAACTTTACCAGTGTTGCCGCCGACCAGACCACTTTCGTGCTGAGCGATGTTGGGTCTACGATTAACTTTGCGGTAGCGGCTAACGCTGGGCGTGTGTCGTCGGGGATGGTGTGGGCAGCGTGTACAGCTACGCACAAAACCGACATTGGCAAACTGAAAACTATCTGGATCAGTGAGATGGATTCGTCGCAAATTCATCTCAAGTGGAAAACGGAATGCGTTGATGTGGCACATGTGGGATACATGATCTACTACTGTTCGATCTCGTCTCCACGTACGCTCGGCTGCAAGGAACCAGAGATGAAGATTAATGTGACGGATAAGACTCTGGACCACTTTCTGTTGGAAAATCTCCATCCATATGTGACATACAAAATTGAAATTGCCATGTACTCCGATACGCACATTGGGCCACGCAGCGTGCCGTTAGTAAATACTACTATGGAAGCAGCTCCATCACCGCCACGAAACTTAGTAACGGAAAGAGTAACAAATAACAGTATATCCCTCCACTGGGGAACCTCCGGCACACATAAACGGTGGAAAGATGTTCTACTG] consensusID : consensus_2413#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 576 fasta sequence [CCGCGCACGCAGTGGATTCCACTACAATATCACTCTGATTGACCAGCACGGAAGAATTGTCGAACACCTTAACACCACCGGGGGCATGATCGATCGACATCATTTAGTTGACATGAATTACACATTCGTAATAAAAAGTGCCAACCCGGAAGGTATGTCCGAACAAGCCAGCAAGGTGTTTGTTCCAGCTCGTCGCCATCGCCTTGACAAGCCTTCAATCGACAAGCTGCTGTCGGATTCGGGCAAATTTACGCTGTCCTGGAAACCTCCTTCAAGGATCCACTCTCCAATTACAAGCTACACCGTGTTCTGGTGCAATACGACTAGCAACTCTCCGAACGATTGCAATGGATCCATAAACTTTACCAGTGTTGCCGCCGACCAGACCACTTTCGTGCTGAGCGATGTTGGGTCTACGATTAACTTTGCGGTAGCGGCTAACGCTGGGCGTGTGTCGTCGGGGATGGTGTGGGCAGCGTGTACAGCTACGCACAAAACCGACATTGGCAAACTGAAAACTATCTGGATCAGTGAGATGGATTCGTCGCAAATTCATCTCAAGTGGAAAACGGAATG] [+] EMBL BM618730 [CCGCGCACGCAGTGGATTCCACTACAATATCACTCTGATTGACCAGCACGGAAGAATTGTCGAACACCTTAACACCACCGGGGGCATGATCGATCGACATCATTTAGTTGACATGAATTACACATTCGTAATAAAAAGTGCCAACCCGGAAGGTATGTCCGAACAAGCCAGCAAGGTGTTTGTTCCAGCTCGTCGCCATCGCCTTGACAAGCCTTCAATCGACAAGCTGCTGTCGGATTCGGGCAAATTTACGCTGTCCTGGAAACCTCCTTCAAGGATCCACTCTCCAATTACAAGCTACACCGTGTTCTGGTGCAATACGACTAGCAACTCTCCGAACGATTGCAATGGATCCATAAACTTTACCAGTGTTGCCGCCGACCAGACCACTTTCGTGCTGAGCGATGTTGGGTCTACGATTAACTTTGCGGTAGCGGCTAACGCTGGGCGTGTGTCGTCGGGGATGGTGTGGGCAGCGTGTACAGCTACGCACAAAACCGACATTGGCAAACTGAAAACTATCTGGATCAGTGAGATGGATTCGTCGCAAATTCATCTCAAGTGGAAAACGGAATG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2413#0 ------------------------------------------------------------ consensus_2413#1 CCGCGCACGCAGTGGATTCCACTACAATATCACTCTGATTGACCAGCACGGAAGAATTGT 60 consensus_2413#0 ------------------------------------------------------------ consensus_2413#1 CGAACACCTTAACACCACCGGGGGCATGATCGATCGACATCATTTAGTTGACATGAATTA 120 consensus_2413#0 ------------------------------------------------------------ consensus_2413#1 CACATTCGTAATAAAAAGTGCCAACCCGGAAGGTATGTCCGAACAAGCCAGCAAGGTGTT 180 consensus_2413#0 ------------------------------------------------------------ consensus_2413#1 TGTTCCAGCTCGTCGCCATCGCCTTGACAAGCCTTCAATCGACAAGCTGCTGTCGGATTC 240 consensus_2413#0 ---------------------------------------CCGCGGACGCGTGGCAAGCTA 21 consensus_2413#1 GGGCAAATTTACGCTGTCCTGGAAACCTCCTTCAAGGATCCACTCTCCAATTACAAGCTA 300 ** * * * ******* consensus_2413#0 CACCGTGTTCTGGTGCAATACGACTAGCAACTCTCCGAACGATTGCAATGGATCCATAAA 81 consensus_2413#1 CACCGTGTTCTGGTGCAATACGACTAGCAACTCTCCGAACGATTGCAATGGATCCATAAA 360 ************************************************************ consensus_2413#0 CTTTACCAGTGTTGCCGCCGACCAGACCACTTTCGTGCTGAGCGATGTTGGGTCTACGAT 141 consensus_2413#1 CTTTACCAGTGTTGCCGCCGACCAGACCACTTTCGTGCTGAGCGATGTTGGGTCTACGAT 420 ************************************************************ consensus_2413#0 TAACTTTGCGGTAGCGGCTAACGCTGGGCGTGTGTCGTCGGGGATGGTGTGGGCAGCGTG 201 consensus_2413#1 TAACTTTGCGGTAGCGGCTAACGCTGGGCGTGTGTCGTCGGGGATGGTGTGGGCAGCGTG 480 ************************************************************ consensus_2413#0 TACAGCTACGCACAAAACCGACATTGGCAAACTGAAAACTATCTGGATCAGTGAGATGGA 261 consensus_2413#1 TACAGCTACGCACAAAACCGACATTGGCAAACTGAAAACTATCTGGATCAGTGAGATGGA 540 ************************************************************ consensus_2413#0 TTCGTCGCAAATTCATCTCAAGTGGAAAACGGAATGCGTTGATGTGGCACATGTGGGATA 321 consensus_2413#1 TTCGTCGCAAATTCATCTCAAGTGGAAAACGGAATG------------------------ 576 ************************************ consensus_2413#0 CATGATCTACTACTGTTCGATCTCGTCTCCACGTACGCTCGGCTGCAAGGAACCAGAGAT 381 consensus_2413#1 ------------------------------------------------------------ consensus_2413#0 GAAGATTAATGTGACGGATAAGACTCTGGACCACTTTCTGTTGGAAAATCTCCATCCATA 441 consensus_2413#1 ------------------------------------------------------------ consensus_2413#0 TGTGACATACAAAATTGAAATTGCCATGTACTCCGATACGCACATTGGGCCACGCAGCGT 501 consensus_2413#1 ------------------------------------------------------------ consensus_2413#0 GCCGTTAGTAAATACTACTATGGAAGCAGCTCCATCACCGCCACGAAACTTAGTAACGGA 561 consensus_2413#1 ------------------------------------------------------------ consensus_2413#0 AAGAGTAACAAATAACAGTATATCCCTCCACTGGGGAACCTCCGGCACACATAAACGGTG 621 consensus_2413#1 ------------------------------------------------------------ consensus_2413#0 GAAAGATGTTCTACTG 637 consensus_2413#1 ---------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||