These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2479#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 681 fasta sequence [GAATCCCCGAGGTTAAACAGACATGCAAGTAAGCTAGCAGTAAAACGCTAAACGTTTCTCGGTTCTGTTGTGATTCTGAAATTATTTGTGTACGCTTTTCTTACAAGCTCTCACATACACACACTCCATTTCACTACTTGAGGCCACCGAAGCGAAGGCAATTTTAAACATCCTTTTCAATGCCCTAGCACTGTTTCACGCCAGGGCGTGAATATTTCACCTGCAGAGAGGGACTGAAATGAGCGGAAGAGGTGCAAGGATGTGCAATGGGAAGGGGAAGAAGTGCAGGAGGATTAGGCAGAGGAGGGTGGCGAACACATCACACCGTGCAAGCATATATGCACTGGATGATGGGATGCATTCGGCATGNGNTGGNTNATGGATGAACGGTGATCGNAGAAAGCCAAAGCAAAAGTTTACGAACATGTTATCTAGGTTAAGTTTCGGCTACAAACAAAGAAATTACTCTTAGCGTAACACTGACTTCNAACANATTCNNGTCAACATNNGACTATACTTAAACACACAGTCGTACACCACCTACATATTACCACACATACNGACCCTACACAAACACGTACACACACACACACACACCTAACACGGCTGCANCAATGCGGACNGAAGCACAGGTGACNCGAAACCACCGGGAGCCACTCGGATGCCTGGGGATATCTGCTC] [+] EMBL AL930541 [GAATCCCCGAGGTTAAACAGACATGCAAGTAAGCTAGCAGTAAAACGCTAAACGTTTCTCGGTTCTGTTGTGATTCTGAAATTATTTGTGTACGCTTTTCTTACAAGCTCTCACATACACACACTCCATTTCACTACTTGAGGCCACCGAAGCGAAGGCAATTTTAAACATCCTTTTCAATGCCCTAGCACTGTTTCACGCCAGGGCGTGAATATTTCACCTGCAGAGAGGGACTGAAATGAGCGGAAGAGGTGCAAGGATGTGCAATGGGAAGGGGAAGAAGTGCAGGAGGATTAGGCAGAGGAGGGTGGCGAACACATCACACCGTGCAAGCATATATGCACTGGATGATGGGATGCATTCGGCATGNGNTGGNTNATGGATGAACGGTGATCGNAGAAAGCCAAAGCAAAAGTTTACGAACATGTTATCTAGGTTAAGTTTCGGCTACAAACAAAGAAATTACTCTTAGCGTAACACTGACTTCNAACANATTCNNGTCAACATNNGACTATACTTAAACACACAGTCGTACACCACCTACATATTACCACACATACNGACCCTACACAAACACGTACACACACACACACACACCTAACACGGCTGCANCAATGCGGACNGAAGCACAGGTGACNCGAAACCACCGGGAGCCACTCGGATGCCTGGGGATATCTGCTC] consensusID : consensus_2479#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 85 fasta sequence [CCGGGATTAGGAGAGGAGGGAGTATGGCCATGGTGGCGAACACATCACACCGAGCAAGCATATATGCACTGGATGATGGGATGAT] [+] EMBL BM592295 [CCGGGATTAGGAGAGGAGGGAGTATGGCCATGGTGGCGAACACATCACACCGAGCAAGCATATATGCACTGGATGATGGGATGAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2479#0 GAATCCCCGAGGTTAAACAGACATGCAAGTAAGCTAGCAGTAAAACGCTAAACGTTTCTC 60 consensus_2479#1 ------------------------------------------------------------ consensus_2479#0 GGTTCTGTTGTGATTCTGAAATTATTTGTGTACGCTTTTCTTACAAGCTCTCACATACAC 120 consensus_2479#1 ------------------------------------------------------------ consensus_2479#0 ACACTCCATTTCACTACTTGAGGCCACCGAAGCGAAGGCAATTTTAAACATCCTTTTCAA 180 consensus_2479#1 ------------------------------------------------------------ consensus_2479#0 TGCCCTAGCACTGTTTCACGCCAGGGCGTGAATATTTCACCTGCAGAGAGGGACTGAAAT 240 consensus_2479#1 ------------------------------------------------------------ consensus_2479#0 GAGCGGAAGAGGTGCAAGGATGTGCAATGGGAAGGGGAAGAAGTGCAGGAGGATTAGGCA 300 consensus_2479#1 --------------------------------CCGGGATTAGGAGAGGAGGGAGTATG-- 26 **** * * * * *** ** * consensus_2479#0 GAGGAGGGTGGCGAACACATCACACCGTGCAAGCATATATGCACTGGATGATGGGATGCA 360 consensus_2479#1 -GCCATGGTGGCGAACACATCACACCGAGCAAGCATATATGCACTGGATGATGGGATG-A 84 * ********************* ****************************** * consensus_2479#0 TTCGGCATGNGNTGGNTNATGGATGAACGGTGATCGNAGAAAGCCAAAGCAAAAGTTTAC 420 consensus_2479#1 T----------------------------------------------------------- 85 * consensus_2479#0 GAACATGTTATCTAGGTTAAGTTTCGGCTACAAACAAAGAAATTACTCTTAGCGTAACAC 480 consensus_2479#1 ------------------------------------------------------------ consensus_2479#0 TGACTTCNAACANATTCNNGTCAACATNNGACTATACTTAAACACACAGTCGTACACCAC 540 consensus_2479#1 ------------------------------------------------------------ consensus_2479#0 CTACATATTACCACACATACNGACCCTACACAAACACGTACACACACACACACACACCTA 600 consensus_2479#1 ------------------------------------------------------------ consensus_2479#0 ACACGGCTGCANCAATGCGGACNGAAGCACAGGTGACNCGAAACCACCGGGAGCCACTCG 660 consensus_2479#1 ------------------------------------------------------------ consensus_2479#0 GATGCCTGGGGATATCTGCTC 681 consensus_2479#1 --------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||