These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_251#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 912 fasta sequence [GGCCAGAATCGGCACGTNGGTGAACCAGTCTGCAATGCGTGTGGACTGTACTACAAACTGCACAACGTGAACCGTCCACTGGCGATGAAAAAAGATAACATACAGTCTCGTAAGCGCAAACCGAAGGGAAGCAAAAATAGCGATGGTAACGGCAAGAGTAACGCTAGTAACGCTTCGGCTAACCGTCAGACCAATTCGAGCAGTAGCAGCCTAGCCGAGACACCGAAGAAAACAGATGGCCTCAAGTTGATGAACATTGCGGAAAACTCCTCCTTCGACAAGCTGCTGCCATCGTCACCGTCAAGCGAGGGCAGCAATCAGTCGCCCGCGCACCATAACCATATGTCCCCGATCTGCTACACGCAGCAGGTCCCCTCGCCAATCACCAGCACTTCCTCGAGCGGCGCAATCTGTCAGCAACAGCAAATATAACAACCAGCAACCCAAAGCCACCAATGCCTTTTTGCTACAGTCGCCCACACCGATGAACATGTTCGTCGGCAGTCCCACGGGCGGTATCGGGTCGGGTCAGCATCACCACCATCAGCATCATCAAATCCACGGCATGCCGCTGCCACCGGNGGCACTGAGCCCGGGTGAGCTACAGTATGGCGGGCGTNGGGCATGGAAACAAGTAACGGATCGATCCGTTAAGTTCCCAAGGTATCAGGCAAAGCCCACGGGAAATCGGCCCGAGGGACATTGCTTGTACTACCGGAATCATTGGCTTGGCCTGGGGCCCTGATTGTTGAACCGGGTAAANGCAGTCTCCGATTCCAAGAAACCTCCGAGCTTGGNGGCACCAAATTGGNTAAAAGGACTTGGGAAACCGCGATCTGNGGTTGGGCACAATTCNCCTTACGGCCAAGTGTAACCCACAGTAAGGGACACTTGGACACCAACGNAGGGTNA] [+] EMBL BX467210 [GGCCAGAATCGGCACGTNGGTGAACCAGTCTGCAATGCGTGTGGACTGTACTACAAACTGCACAACGTGAACCGTCCACTGGCGATGAAAAAAGATAACATACAGTCTCGTAAGCGCAAACCGAAGGGAAGCAAAAATAGCGATGGTAACGGCAAGAGTAACGCTAGTAACGCTTCGGCTAACCGTCAGACCAATTCGAGCAGTAGCAGCCTAGCCGAGACACCGAAGAAAACAGATGGCCTCAAGTTGATGAACATTGCGGAAAACTCCTCCTTCGACAAGCTGCTGCCATCGTCACCGTCAAGCGAGGGCAGCAATCAGTCGCCCGCGCACCATAACCATATGTCCCCGATCTGCTACACGCAGCAGGTCCCCTCGCCAATCACCAGCACTTCCTCGAGCGGCGCAATCTGTCAGCAACAGCAAATATAACAACCAGCAACCCAAAGCCACCAATGCCTTTTTGCTACAGTCGCCCACACCGATGAACATGTTCGTCGGCAGTCCCACGGGCGGTATCGGGTCGGGTCAGCATCACCACCATCAGCATCATCAAATCCACGGCATGCCGCTGCCACCGGNGGCACTGAGCCCGGGTGAGCTACAGTATGGCGGGCGTNGGGCATGGAAACAAGTAACGGATCGATCCGTTAAGTTCCCAAGGTATCAGGCAAAGCCCACGGGAAATCGGCCCGAGGGACATTGCTTGTACTACCGGAATCATTGGCTTGGCCTGGGGCCCTGATTGTTGAACCGGGTAAANGCAGTCTCCGATTCCAAGAAACCTCCGAGCTTGGNGGCACCAAATTGGNTAAAAGGACTTGGGAAACCGCGATCTGNGGTTGGGCACAATTCNCCTTACGGCCAAGTGTAACCCACAGTAAGGGACACTTGGACACCAACGNAGGGTNA] consensusID : consensus_251#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 676 fasta sequence [GGATTTCATTAGAGCCTTATCCTGGTGTTGTTGTTGTTGTTGTTGCTTGGAACCCNTCCGAATGACCCCGAATTCCCTTAGCGTAGTTTAGTTCGCAGATCCCATTGTTTTAGAGATGCTCTAATTCTAACATTTACTAGCATCTTTTAGTTACTGTTGCTTACTAATTAACCTATTATCGCTTTGTAATCTAATCATCCACACTCCCTGTAACAAAAAATGTCCCCATGTATCCGTGTTGTTTGTTTCGATGTTCGTTTAACAAAAACCGTTTCTAATACTGATTCTGTTTTAACTATCCTCATCAGAGCTCGGCAAGACGTGTAGGACTGCAATGCTCTAACTGCAACACAACCAACACTTCGCTGTGGCGCCGCAATCAAGTCGGTGAACCAGTCTGCAATGCGTGTGGACTGTACTACAAACTGCACAACGTGAACCGTCCACTGAATCAATTTTCCTTTGCAGTCTCGTAAGCGCAAACCGAAGGGAAGCAAAAATAGCGATGGTAACGGCAAGAGTAACGCTAGTAACGCTTCGGCTAACCGTCAGACCAATTCGAGCAGTAGCAGCATTTTATTGTACGTCAGATCGGGCAGCACGATTTGTGAACCAATTTTTCCAAGCCGCTTGAAGTGCTTAAAAAACATTCCATCCTAACAGTTCAATTTGTTCG] [-] EMBL BX622965 [GGATTTCATTAGAGCCTTATCCTGGTGTTGTTGTTGTTGTTGTTGCTTGGAACCCNTCCGAATGACCCCGAATTCCCTTAGCGTAGTTTAGTTCGCAGATCCCATTGTTTTAGAGATGCTCTAATTCTAACATTTACTAGCATCTTTTAGTTACTGTTGCTTACTAATTAACCTATTATCGCTTTGTAATCTAATCATCCACACTCCCTGTAACAAAAAATGTCCCCATGTATCCGTGTTGTTTGTTTCGATGTTCGTTTAACAAAAACCGTTTCTAATACTGATTCTGTTTTAACTATCCTCATCAGAGCTCGGCAAGACGTGTAGGACTGCAATGCTCTAACTGCAACACAACCAACACTTCGCTGTGGCGCCGCAATCAAGTCGGTGAACCAGTCTGCAATGCGTGTGGACTGTACTACAAACTGCACAACGTGAACCGTCCACTGAATCAATTTTCCTTTGCAGTCTCGTAAGCGCAAACCGAAGGGAAGCAAAAATAGCGATGGTAACGGCAAGAGTAACGCTAGTAACGCTTCGGCTAACCGTCAGACCAATTCGAGCAGTAGCAGCATTTTATTGTACGTCAGATCGGGCAGCACGATTTGTGAACCAATTTTTCCAAGCCGCTTGAAGTGCTTAAAAAACATTCCATCCTAACAGTTCAATTTGTTCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_251#0 GGCCAGAATCGGCACGTNGGTGAACCAGTCTGCAATGCGTGTGGACTGTACTACAAACTG 60 consensus_251#1 ------------------------------------------------------------ consensus_251#0 CACAACGTGAACCGTCCACTGGCGATGAAAAAAGATAACATACAGTCTCGTAAGCGCAAA 120 consensus_251#1 ------------------------------------------------------------ consensus_251#0 CCGAAGGGAAGCAAAAATAGCGATGGTAACGGCAAGAGTAACGCTAGTAACGCTTCGGCT 180 consensus_251#1 --------------------------------------GGATTTCATTAGAGCCTTATCC 22 * * ** ** * * consensus_251#0 AACCGTCAGACCAATTCGAGCAGTAGCAGCCTAGCCGAGACACCGAAGAAAACAGATGGC 240 consensus_251#1 TGGTGTTG------TTGTTGTTGTTGTTGCTTGGAACCCNTCCGAATGACCCCGAATTCC 76 ** ** * ** * ** * * * * ** * ** * consensus_251#0 CTCAAGTTGATGAACATTGCGGAAAACTCCTCCTTCGACAAGCTGCTGCCATCGTCACCG 300 consensus_251#1 CTTAGCGTAGTT--TAGTTCGCAGATCCCATTGTTTTA-GAGATGCTCTAATTCTAACAT 133 ** * * * * * ** * * * * * ** * ** **** ** * ** consensus_251#0 TCAAGCGAGGGCAGCAATCAGTCGCCCGCGCACCATAACCATATGTCCCCGATCTGCTAC 360 consensus_251#1 TTACT----AGCATCTTTTAGTTACTGTTGCTTACTAATTA----------ACCTATTAT 179 * * *** * * *** * ** *** * * ** ** consensus_251#0 ACGCAGCAGGTCCCCTCGCCAATCACCAGCACTTCCTCGAGCGGCGCAATCTGTCAGCAA 420 consensus_251#1 -CGC------TTTGTAATCTAATCATCCACACTCCCT---GTAACAAAAAATGTCCCCAT 229 *** * * ***** * **** *** * * ** **** ** consensus_251#0 CAGCAAATATAACAACCAGCAACCCAAAGCCACCAATGCCTTTTTGCTACAGTCGCCCAC 480 consensus_251#1 GTATCCGTGTTGTTTGTTTCGATGTTCGTTTAACAAAAACCGTTTCTAATACTGATTCTG 289 * * * * * *** * *** * * * * consensus_251#0 ACCGATGAACATGTTCGTCGGCAGTCCCACGGGCGGTATCGGGTCGGGTCAGCATCACCA 540 consensus_251#1 TTT--TAACTATCCTCATCAG-AGCTCGGCAAGACGTGTAGGACTG---CAATG-CTCTA 342 * * ** ** ** * ** * * * ** * ** * ** * * * consensus_251#0 CCATCAGCATCATCAAATCCACGGCATGCCGCTGCCACCGGNGGCACTGAGCCCGGGTGA 600 consensus_251#1 ACTGCAACACAACCAACACTTCGCTGTGGCGCCGCAATCA-AGTCGGTGAACCAGTCTGC 401 * ** ** * *** * ** ** *** ** * * * * *** ** * ** consensus_251#0 GCTACAGTATGGCGGGCGTNGGGCATGGAAACAAGT-AACGGATCGATCCGTTAAGTTCC 659 consensus_251#1 AATGC-GTGTGGACTGTACTACAAACTGCACAACGTGAACCGTCCACTGAATCAATTTTC 460 * * ** *** * * * * * ** *** * * * * ** ** * consensus_251#0 CAAGGTA-TCAGGCAAA-GCCCACGGGAAATCGGCCCGAGGGACATTGCTTGTACTACCG 717 consensus_251#1 CTTTGCAGTCTCGTAAGCGCAAACCGAAGGGAAGCAAAAATAGCGATGGTAACGGCAAGA 520 * * * ** * ** ** ** * * ** * * ** * * consensus_251#0 GAATCATTGGCTTGGCCTGGGGCCCTGATTGTTGAACCGGGTAAANGCAGTCTCCG-ATT 776 consensus_251#1 GTAACGCTAGTAACGCTTCGG---CTAACCGTCAGACCAATTCGAG-CAGTAGCAGCATT 576 * * * * * ** * ** ** * ** *** * * **** * * *** consensus_251#0 CCAAGAAACCTCCGAGCTTGGNGGCACCAAATTGGNTAAAAGGACTTGGGAAACCGCGAT 836 consensus_251#1 TTATTGTACGTCAGATCG-GGCAGCAC--GATTTGTGAACCAATTTTTCCAAGCCGCTTG 633 * ** ** ** * ** **** *** * ** ** ** **** consensus_251#0 CTGNGGTTGGGCACAATTCN--CCTTACGGCCAAGTGTAACCCACAGTAAGGGACACTTG 894 consensus_251#1 AAGTGCTTAAAAAACATTCCATCCTAACAGTTCAATTTGTTCG----------------- 676 * * ** * **** *** ** * * * * * consensus_251#0 GACACCAACGNAGGGTNA 912 consensus_251#1 ------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||