These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2876#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 424 fasta sequence [GCATGGCGAGAAGAAGAAAAAAAAAACAAAACAAAAATATTAATGTTATTTATTTATTGATATTTATGTAAAAAAAGAAGAGTAAAAAAAGGAAAAACAACAAAAAAATAAAAATAAACTGAAAAACAACAAACAAAACATACGAACACACACATACACATACCCAAAACTACCAATACTAATAGGAAAACGACTGAGTGTCTCAATGAACACGATGAGAGGATTGTGGGGGGGATGGATTCTTTACGACTCGACAGAGAAGAAGAAGAAGAAGAAGAGAAACATTCGAACAGCATGAACGAACGAAAGGAAGCGATGGAAAGAGGAGAAAAACATACACACACATACACACTGTTAATACTGGACGGTACAGGAATTGTGAAGATGCACAACACAAAAAGATGCATCAAACGAAAAGGTAAAA] [+] EMBL BX609535 [GCATGGCGAGAAGAAGAAAAAAAAAACAAAACAAAAATATTAATGTTATTTATTTATTGATATTTATGTAAAAAAAGAAGAGTAAAAAAAGGAAAAACAACAAAAAAATAAAAATAAACTGAAAAACAACAAACAAAACATACGAACACACACATACACATACCCAAAACTACCAATACTAATAGGAAAACGACTGAGTGTCTCAATGAACACGATGAGAGGATTGTGGGGGGGATGGATTCTTTACGACTCGACAGAGAAGAAGAAGAAGAAGAAGAGAAACATTCGAACAGCATGAACGAACGAAAGGAAGCGATGGAAAGAGGAGAAAAACATACACACACATACACACTGTTAATACTGGACGGTACAGGAATTGTGAAGATGCACAACACAAAAAGATGCATCAAACGAAAAGGTAAAA] consensusID : consensus_2876#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 201 fasta sequence [AACCGTATGTAACTAAAAACAAGAAAAACAACAAAAAAATAAAAATAAACTGAAAAACAACAAACAAAACATACGAACACACACATACACATACACAAAACTACCAATACTAATAGGAAAACGACTGAGTGTCTCAATGAACACGATGAGAGGATTGTGGGGGGGATGGATCCTTTACGACTCGACAGAGAAGAAGAAGAA] [+] EMBL BX612092 [AACCGTATGTAACTAAAAACAAGAAAAACAACAAAAAAATAAAAATAAACTGAAAAACAACAAACAAAACATACGAACACACACATACACATACACAAAACTACCAATACTAATAGGAAAACGACTGAGTGTCTCAATGAACACGATGAGAGGATTGTGGGGGGGATGGATCCTTTACGACTCGACAGAGAAGAAGAAGAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2876#0 GCATGGCGAGAAGAAGAAAAAAAAAACAAAACAAAAATATTAATGTTATTTATTTATTGA 60 consensus_2876#1 ------------------------------------------------------------ consensus_2876#0 TATTTATGTAAAAAAAGAAGAGTAAAAAAAGGAAAAACAACAAAAAAATAAAAATAAACT 120 consensus_2876#1 ---------AACCGTATGTAACTAAAAACAAGAAAAACAACAAAAAAATAAAAATAAACT 51 ** * * ****** * ***************************** consensus_2876#0 GAAAAACAACAAACAAAACATACGAACACACACATACACATACCCAAAACTACCAATACT 180 consensus_2876#1 GAAAAACAACAAACAAAACATACGAACACACACATACACATACACAAAACTACCAATACT 111 ******************************************* **************** consensus_2876#0 AATAGGAAAACGACTGAGTGTCTCAATGAACACGATGAGAGGATTGTGGGGGGGATGGAT 240 consensus_2876#1 AATAGGAAAACGACTGAGTGTCTCAATGAACACGATGAGAGGATTGTGGGGGGGATGGAT 171 ************************************************************ consensus_2876#0 TCTTTACGACTCGACAGAGAAGAAGAAGAAGAAGAAGAGAAACATTCGAACAGCATGAAC 300 consensus_2876#1 CCTTTACGACTCGACAGAGAAGAAGAAGAA------------------------------ 201 ***************************** consensus_2876#0 GAACGAAAGGAAGCGATGGAAAGAGGAGAAAAACATACACACACATACACACTGTTAATA 360 consensus_2876#1 ------------------------------------------------------------ consensus_2876#0 CTGGACGGTACAGGAATTGTGAAGATGCACAACACAAAAAGATGCATCAAACGAAAAGGT 420 consensus_2876#1 ------------------------------------------------------------ consensus_2876#0 AAAA 424 consensus_2876#1 ---- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||