These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2902#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 342 fasta sequence [TTTCATTTCAAGGGGTATCTTAAATTTATTCACTTTATAATGTCCTAAAATTTACACACTATAATGTTTAGGTGCCGGCTCACACCTTAAATGAAATAAGTGGGGACTTCGCCTCATACTCTGCTACCTATCTAGCTGGGTTCGATCGTTCGTTATCGAGTTTTTCCTTTCTGTAGGTCAATGTTATGTCTCACTGTATGTTTATTCGCCCTTAGATATGAAAAACAGAAATTAGAAACGTTTGAATGGGTACAAAAACCCAAACTATACCACAACAGTTCGGATGCCCTCCCACAAAACAGGAGAAAGCGTTCCAAATTATTGACGAGCGATATTTAATGA] [+] EMBL BX611601 [TTTCATTTCAAGGGGTATCTTAAATTTATTCACTTTATAATGTCCTAAAATTTACACACTATAATGTTTAGGTGCCGGCTCACACCTTAAATGAAATAAGTGGGGACTTCGCCTCATACTCTGCTACCTATCTAGCTGGGTTCGATCGTTCGTTATCGAGTTTTTCCTTTCTGTAGGTCAATGTTATGTCTCACTGTATGTTTATTCGCCCTTAGATATGAAAAACAGAAATTAGAAACGTTTGAATGGGTACAAAAACCCAAACTATACCACAACAGTTCGGATGCCCTCCCACAAAACAGGAGAAAGCGTTCCAAATTATTGACGAGCGATATTTAATGA] consensusID : consensus_2902#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 272 fasta sequence [CAAGGGGTATTTTAAATTTATTCACTGTATAATGTCCTAAAATTTACACACTATAATGTTTAGGTGACGGCTCACACCTTAAATGAAATAAGTGGGGACTACGCCTCATACTCTGCTACCTATCTAGCTGGGTTCGATCGTTCGTTCCTTTCTGTAGGTCAATGTTATGTCTCGCTGTATGTTTATTCGCCCTTAGATATGAAAAACAGAAATTAGAAACGTTTGCATGGGTACAAAAACCCAAACGGACGCGTGGGCGGACGCGTGGGCGG] [-] EMBL BM640406 [CAAGGGGTATTTTAAATTTATTCACTGTATAATGTCCTAAAATTTACACACTATAATGTTTAGGTGACGGCTCACACCTTAAATGAAATAAGTGGGGACTACGCCTCATACTCTGCTACCTATCTAGCTGGGTTCGATCGTTCGTTCCTTTCTGTAGGTCAATGTTATGTCTCGCTGTATGTTTATTCGCCCTTAGATATGAAAAACAGAAATTAGAAACGTTTGCATGGGTACAAAAACCCAAACGGACGCGTGGGCGGACGCGTGGGCGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2902#0 TTTCATTTCAAGGGGTATCTTAAATTTATTCACTTTATAATGTCCTAAAATTTACACACT 60 consensus_2902#1 --------CAAGGGGTATTTTAAATTTATTCACTGTATAATGTCCTAAAATTTACACACT 52 ********** *************** ************************* consensus_2902#0 ATAATGTTTAGGTGCCGGCTCACACCTTAAATGAAATAAGTGGGGACTTCGCCTCATACT 120 consensus_2902#1 ATAATGTTTAGGTGACGGCTCACACCTTAAATGAAATAAGTGGGGACTACGCCTCATACT 112 ************** ********************************* *********** consensus_2902#0 CTGCTACCTATCTAGCTGGGTTCGATCGTTCGTTATCGAGTTTTTCCTTTCTGTAGGTCA 180 consensus_2902#1 CTGCTACCTATCTAGCTGGGTTCGATCGTTCGTT-----------CCTTTCTGTAGGTCA 161 ********************************** *************** consensus_2902#0 ATGTTATGTCTCACTGTATGTTTATTCGCCCTTAGATATGAAAAACAGAAATTAGAAACG 240 consensus_2902#1 ATGTTATGTCTCGCTGTATGTTTATTCGCCCTTAGATATGAAAAACAGAAATTAGAAACG 221 ************ *********************************************** consensus_2902#0 TTTGAATGGGTACAAAAACCCAAACTATACCACAACAGTTCGGATGCCCTCCCACAAAAC 300 consensus_2902#1 TTTGCATGGGTACAAAAACCCAAACGGACGCGTGGGCGGACGCGTGGGCGG--------- 272 **** ******************** * * ** ** * consensus_2902#0 AGGAGAAAGCGTTCCAAATTATTGACGAGCGATATTTAATGA 342 consensus_2902#1 ------------------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||